RNA–Protein interactions for RNA: ENST00000477440.6

ARHGEF3-208, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-208ENST00000477440 NDUFA6P56556 154 aa15.93■□□□□ 0.14
ARHGEF3-208ENST00000477440 CHCHD1Q96BP2 118 aaKnown RBP15.93■□□□□ 0.14
ARHGEF3-208ENST00000477440 TRBV30A0A0K0K1B3 111 aa15.92■□□□□ 0.14
ARHGEF3-208ENST00000477440 COLCA2A8K830 154 aa15.92■□□□□ 0.14
ARHGEF3-208ENST00000477440 TLX1NBP0CAT3 122 aa15.92■□□□□ 0.14
ARHGEF3-208ENST00000477440 Q6ZRP5 223 aa15.91■□□□□ 0.14
ARHGEF3-208ENST00000477440 C7orf33Q8WU49 177 aa15.91■□□□□ 0.14
ARHGEF3-208ENST00000477440 A0A1W2PNN7 141 aa15.9■□□□□ 0.14
ARHGEF3-208ENST00000477440 ATP5LO75964 103 aa15.9■□□□□ 0.14
ARHGEF3-208ENST00000477440 HNRNPA3P51991 378 aaKnown RBP15.9■□□□□ 0.14
ARHGEF3-208ENST00000477440 C6orf226Q5I0X4 101 aa15.9■□□□□ 0.14
ARHGEF3-208ENST00000477440 IGLC3P0DOY3 106 aa15.89■□□□□ 0.13
ARHGEF3-208ENST00000477440 CKS1BP61024 79 aa15.89■□□□□ 0.13
ARHGEF3-208ENST00000477440 C9orf116Q5BN46 136 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF3-208ENST00000477440 SPINK8P0C7L1 97 aa15.88■□□□□ 0.13
ARHGEF3-208ENST00000477440 BAGE3Q86Y29 109 aa15.88■□□□□ 0.13
ARHGEF3-208ENST00000477440 SCO1O75880 301 aa15.87■□□□□ 0.13
ARHGEF3-208ENST00000477440 GAGE2EQ4V326 116 aa15.86■□□□□ 0.13
ARHGEF3-208ENST00000477440 GAGE2DQ9UEU5 116 aa15.86■□□□□ 0.13
ARHGEF3-208ENST00000477440 NDUFC2-KCTD14E9PQ53 114 aa15.84■□□□□ 0.13
ARHGEF3-208ENST00000477440 HSBP1O75506 76 aa15.84■□□□□ 0.13
ARHGEF3-208ENST00000477440 LINC00310P59036 64 aa15.84■□□□□ 0.13
ARHGEF3-208ENST00000477440 FAM19A2Q8N3H0 131 aa15.84■□□□□ 0.13
ARHGEF3-208ENST00000477440 COX7B2Q8TF08 81 aa15.84■□□□□ 0.13
ARHGEF3-208ENST00000477440 H3BRM9 83 aa15.83■□□□□ 0.12
ARHGEF3-208ENST00000477440 ZNF22P17026 224 aaPredicted RBP15.83■□□□□ 0.12
ARHGEF3-208ENST00000477440 DMBT1Q9UGM3 2413 aaPredicted RBP15.83■□□□□ 0.12
ARHGEF3-208ENST00000477440 FAM168BA1KXE4 195 aa15.82■□□□□ 0.12
ARHGEF3-208ENST00000477440 F8VRH5 84 aa15.82■□□□□ 0.12
ARHGEF3-208ENST00000477440 CXCL5P42830 114 aa15.82■□□□□ 0.12
ARHGEF3-208ENST00000477440 LRP1Q07954 4544 aaKnown RBP15.82■□□□□ 0.12
ARHGEF3-208ENST00000477440 SERF1AO75920 110 aa15.81■□□□□ 0.12
ARHGEF3-208ENST00000477440 PRR3P79522 188 aaKnown RBP15.81■□□□□ 0.12
ARHGEF3-208ENST00000477440 IFI27L1Q96BM0 104 aa15.81■□□□□ 0.12
ARHGEF3-208ENST00000477440 C11orf86A6NJI1 115 aa15.8■□□□□ 0.12
ARHGEF3-208ENST00000477440 FAT3Q8TDW7 4589 aa15.79■□□□□ 0.12
ARHGEF3-208ENST00000477440 CHTOPQ9Y3Y2 248 aaKnown RBP15.79■□□□□ 0.12
ARHGEF3-208ENST00000477440 C9orf129Q5T035 196 aaKnown RBP15.78■□□□□ 0.12
ARHGEF3-208ENST00000477440 PHF5AQ7RTV0 110 aaKnown RBP15.78■□□□□ 0.12
ARHGEF3-208ENST00000477440 IGLV5-39A0A0G2JS06 123 aa15.77■□□□□ 0.12
ARHGEF3-208ENST00000477440 FAM19A5Q7Z5A7 132 aaPredicted RBP15.77■□□□□ 0.12
ARHGEF3-208ENST00000477440 TRAV12-1A0A0B4J245 112 aa15.76■□□□□ 0.11
ARHGEF3-208ENST00000477440 NUPR1O60356 82 aa15.76■□□□□ 0.11
ARHGEF3-208ENST00000477440 KRTAP7-1Q8IUC3 87 aa15.76■□□□□ 0.11
ARHGEF3-208ENST00000477440 TMEM170BQ5T4T1 132 aa15.75■□□□□ 0.11
ARHGEF3-208ENST00000477440 KRTAP29-1A8MX34 341 aaPredicted RBP15.74■□□□□ 0.11
ARHGEF3-208ENST00000477440 HERC1Q15751 4861 aa15.73■□□□□ 0.11
ARHGEF3-208ENST00000477440 XAGE1AQ9HD64 81 aa15.72■□□□□ 0.11
ARHGEF3-208ENST00000477440 LEPROTL1O95214 131 aa15.71■□□□□ 0.11
ARHGEF3-208ENST00000477440 J3QL48 77 aa15.7■□□□□ 0.1
ARHGEF3-208ENST00000477440 M0QXV9 152 aa15.69■□□□□ 0.1
ARHGEF3-208ENST00000477440 PSORS1C2Q9UIG4 136 aa15.69■□□□□ 0.1
ARHGEF3-208ENST00000477440 H0Y8G0 127 aa15.68■□□□□ 0.1
ARHGEF3-208ENST00000477440 HIST1H2BKO60814 126 aa15.67■□□□□ 0.1
ARHGEF3-208ENST00000477440 OXTP01178 125 aa15.67■□□□□ 0.1
ARHGEF3-208ENST00000477440 HIST1H2BJP06899 126 aa15.67■□□□□ 0.1
ARHGEF3-208ENST00000477440 HIST1H2BOP23527 126 aa15.67■□□□□ 0.1
ARHGEF3-208ENST00000477440 HIST1H2BBP33778 126 aa15.67■□□□□ 0.1
ARHGEF3-208ENST00000477440 HIST1H2BDP58876 126 aa15.67■□□□□ 0.1
ARHGEF3-208ENST00000477440 HIST1H2BCP62807 126 aa15.67■□□□□ 0.1
ARHGEF3-208ENST00000477440 ODF1Q14990 250 aa15.67■□□□□ 0.1
ARHGEF3-208ENST00000477440 HIST2H2BEQ16778 126 aa15.67■□□□□ 0.1
ARHGEF3-208ENST00000477440 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.67■□□□□ 0.1
ARHGEF3-208ENST00000477440 SERTAD4-AS1Q5TG53 156 aa15.67■□□□□ 0.1
ARHGEF3-208ENST00000477440 KRTAP11-1Q8IUC1 163 aa15.67■□□□□ 0.1
ARHGEF3-208ENST00000477440 HIST1H2BHQ93079 126 aa15.67■□□□□ 0.1
ARHGEF3-208ENST00000477440 HIST1H2BNQ99877 126 aa15.67■□□□□ 0.1
ARHGEF3-208ENST00000477440 HIST1H2BMQ99879 126 aa15.67■□□□□ 0.1
ARHGEF3-208ENST00000477440 TMEM223A0PJW6 202 aa15.66■□□□□ 0.1
ARHGEF3-208ENST00000477440 FABP4P15090 132 aa15.66■□□□□ 0.1
ARHGEF3-208ENST00000477440 HSPB8Q9UJY1 196 aa15.63■□□□□ 0.09
ARHGEF3-208ENST00000477440 C1orf137Q5JT78 98 aa15.61■□□□□ 0.09
ARHGEF3-208ENST00000477440 ZNF625Q96I27 306 aaPredicted RBP15.61■□□□□ 0.09
ARHGEF3-208ENST00000477440 PFN2P35080 140 aa15.6■□□□□ 0.09
ARHGEF3-208ENST00000477440 UBE2BP63146 152 aa15.6■□□□□ 0.09
ARHGEF3-208ENST00000477440 SRSF9Q13242 221 aaKnown RBP eCLIP15.6■□□□□ 0.09
ARHGEF3-208ENST00000477440 SPINK6Q6UWN8 80 aa15.59■□□□□ 0.09
ARHGEF3-208ENST00000477440 ERG28Q9UKR5 140 aa15.59■□□□□ 0.09
ARHGEF3-208ENST00000477440 C22orf24Q9Y442 160 aa15.59■□□□□ 0.09
ARHGEF3-208ENST00000477440 SFTA2Q6UW10 78 aa15.57■□□□□ 0.08
ARHGEF3-208ENST00000477440 PMCHL2Q9BQD1 86 aa15.56■□□□□ 0.08
ARHGEF3-208ENST00000477440 PLA2G2DQ9UNK4 145 aa15.54■□□□□ 0.08
ARHGEF3-208ENST00000477440 PLNP26678 52 aa15.53■□□□□ 0.08
ARHGEF3-208ENST00000477440 COX17Q14061 63 aa15.53■□□□□ 0.08
ARHGEF3-208ENST00000477440 MAP1LC3CQ9BXW4 147 aa15.53■□□□□ 0.08
ARHGEF3-208ENST00000477440 TP73-AS1Q9UF72 201 aa15.53■□□□□ 0.08
ARHGEF3-208ENST00000477440 DPM2O94777 84 aa15.52■□□□□ 0.08
ARHGEF3-208ENST00000477440 IGLV7-43P04211 117 aa15.52■□□□□ 0.08
ARHGEF3-208ENST00000477440 MT1HL1P0DM35 61 aa15.52■□□□□ 0.08
ARHGEF3-208ENST00000477440 MRPL55Q7Z7F7 128 aaKnown RBP15.52■□□□□ 0.08
ARHGEF3-208ENST00000477440 SND1-IT1Q9HBX3 110 aa15.52■□□□□ 0.08
ARHGEF3-208ENST00000477440 LBHQ53QV2 105 aaPredicted RBP15.51■□□□□ 0.07
ARHGEF3-208ENST00000477440 IGLV5-37A0A075B6J1 123 aa15.49■□□□□ 0.07
ARHGEF3-208ENST00000477440 ATP6V1G1O75348 118 aa15.49■□□□□ 0.07
ARHGEF3-208ENST00000477440 IGKCP01834 107 aa15.49■□□□□ 0.07
ARHGEF3-208ENST00000477440 S100A1P23297 94 aa15.48■□□□□ 0.07
ARHGEF3-208ENST00000477440 TSPEAR-AS2P59090 65 aa15.48■□□□□ 0.07
ARHGEF3-208ENST00000477440 COA6Q5JTJ3 125 aaKnown RBP15.47■□□□□ 0.07
ARHGEF3-208ENST00000477440 REG3GQ6UW15 175 aa15.47■□□□□ 0.07
ARHGEF3-208ENST00000477440 LINC00167Q96N53 147 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms