RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 HERVK_113P61574 105 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 HIST1H2BCP62807 126 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 HIST2H2BEQ16778 126 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 C6orf226Q5I0X4 101 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 TMEM170BQ5T4T1 132 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 LCE3AQ5TA76 89 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 Q6ZRN7 208 aaPredicted RBP2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 C5orf38Q86SI9 138 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 LINC01561Q8N1V8 128 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 FAM19A2Q8N3H0 131 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 Q8N814 137 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 OR10D4PQ8NGN7 298 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 ORAOV1Q8WV07 137 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 HIST1H2BHQ93079 126 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 CAMK2N2Q96S95 79 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 AMELXQ99217 191 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 HIST1H2BNQ99877 126 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 HIST1H2BMQ99879 126 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 OPRPNQ99935 248 aaPredicted RBP2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 CST9LQ9H4G1 147 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 TOMM7Q9P0U1 55 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 CHTOPQ9Y3Y2 248 aaKnown RBP2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 IGHV3-64A0A075B6Q5 118 aa2.95□□□□□ -1.94
NSMCE4A-208ENST00000477289 TRAV12-1A0A0B4J245 112 aa2.95□□□□□ -1.94
NSMCE4A-208ENST00000477289 A0A0J9YXV3 536 aa2.95□□□□□ -1.94
NSMCE4A-208ENST00000477289 NDUFA1O15239 70 aa2.95□□□□□ -1.94
NSMCE4A-208ENST00000477289 PLNP26678 52 aa2.95□□□□□ -1.94
NSMCE4A-208ENST00000477289 CXCL5P42830 114 aa2.95□□□□□ -1.94
NSMCE4A-208ENST00000477289 UBE2D1P51668 147 aa2.95□□□□□ -1.94
NSMCE4A-208ENST00000477289 SPAG11BQ08648 103 aa2.95□□□□□ -1.94
NSMCE4A-208ENST00000477289 HIGD2BQ4VC39 106 aa2.95□□□□□ -1.94
NSMCE4A-208ENST00000477289 PDZD11Q5EBL8 140 aa2.95□□□□□ -1.94
NSMCE4A-208ENST00000477289 LINC00242Q5T6M2 205 aa2.95□□□□□ -1.94
NSMCE4A-208ENST00000477289 SFTA2Q6UW10 78 aa2.95□□□□□ -1.94
NSMCE4A-208ENST00000477289 CHAC1Q9BUX1 264 aa2.95□□□□□ -1.94
NSMCE4A-208ENST00000477289 IGLV4-69A0A075B6H9 119 aa2.94□□□□□ -1.94
NSMCE4A-208ENST00000477289 A0A087WZ39 114 aa2.94□□□□□ -1.94
NSMCE4A-208ENST00000477289 LRCOL1A6NCL2 159 aa2.94□□□□□ -1.94
NSMCE4A-208ENST00000477289 F8VRH5 84 aa2.94□□□□□ -1.94
NSMCE4A-208ENST00000477289 DPM2O94777 84 aa2.94□□□□□ -1.94
NSMCE4A-208ENST00000477289 SYCNQ0VAF6 134 aa2.94□□□□□ -1.94
NSMCE4A-208ENST00000477289 FAM19A3Q7Z5A8 133 aa2.94□□□□□ -1.94
NSMCE4A-208ENST00000477289 C2orf48Q96LS8 159 aa2.94□□□□□ -1.94
NSMCE4A-208ENST00000477289 CARD19Q96LW7 228 aa2.94□□□□□ -1.94
NSMCE4A-208ENST00000477289 LINC00474Q9P2X8 69 aa2.94□□□□□ -1.94
NSMCE4A-208ENST00000477289 DNAH7Q8WXX0 4024 aa2.94□□□□□ -1.94
NSMCE4A-208ENST00000477289 GVQW2A0A096LPI5 108 aaPredicted RBP2.93□□□□□ -1.94
NSMCE4A-208ENST00000477289 IGHV3OR16-9A0A0B4J2B5 98 aa2.93□□□□□ -1.94
NSMCE4A-208ENST00000477289 LINC00587B1AMM8 73 aa2.93□□□□□ -1.94
NSMCE4A-208ENST00000477289 HSBP1L1C9JCN9 74 aa2.93□□□□□ -1.94
NSMCE4A-208ENST00000477289 IGKCP01834 107 aa2.93□□□□□ -1.94
NSMCE4A-208ENST00000477289 IGLC3P0DOY3 106 aa2.93□□□□□ -1.94
NSMCE4A-208ENST00000477289 KRTDAPP60985 99 aa2.93□□□□□ -1.94
NSMCE4A-208ENST00000477289 CNBPP62633 177 aaKnown RBP2.93□□□□□ -1.94
NSMCE4A-208ENST00000477289 PET117Q6UWS5 81 aa2.93□□□□□ -1.94
NSMCE4A-208ENST00000477289 Q8IZM0 81 aa2.93□□□□□ -1.94
NSMCE4A-208ENST00000477289 COX7B2Q8TF08 81 aa2.93□□□□□ -1.94
NSMCE4A-208ENST00000477289 CDKN2A-AS1Q9UH64 79 aa2.93□□□□□ -1.94
NSMCE4A-208ENST00000477289 CSMD3Q7Z407 3707 aa2.93□□□□□ -1.94
NSMCE4A-208ENST00000477289 IGLV5-45A0A087WSX0 123 aa2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 A0A096LNJ9 63 aa2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 TRBV30A0A0K0K1B3 111 aa2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 LOC107984640A0A0U1RRK4 108 aa2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 C11orf86A6NJI1 115 aa2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 SYS1-DBNDD2H3BUS1 97 aa2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 SPINK8P0C7L1 97 aa2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 LGALS3P17931 250 aaKnown RBP2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 COX6A2Q02221 97 aa2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 RPL18AQ02543 176 aaKnown RBP2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 COA6Q5JTJ3 125 aaKnown RBP2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 ZC2HC1BQ5TFG8 222 aa2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 KRTAP26-1Q6PEX3 210 aa2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 LINC00173Q6ZV60 143 aa2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 MAPKAPK5-AS1Q8N8E1 139 aa2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 C15orf56Q8N910 161 aa2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 C9orf163Q8N9P6 203 aa2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 PLEKHB2Q96CS7 222 aa2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 MRPL35Q9NZE8 188 aaKnown RBP2.92□□□□□ -1.94
NSMCE4A-208ENST00000477289 MYMXA0A1B0GTQ4 84 aa2.91□□□□□ -1.94
NSMCE4A-208ENST00000477289 SMIM1B2RUZ4 78 aa2.91□□□□□ -1.94
NSMCE4A-208ENST00000477289 ZNF22P17026 224 aaPredicted RBP2.91□□□□□ -1.94
NSMCE4A-208ENST00000477289 SNRPEP62304 92 aaKnown RBP2.91□□□□□ -1.94
NSMCE4A-208ENST00000477289 RPL24P83731 157 aaKnown RBP2.91□□□□□ -1.94
NSMCE4A-208ENST00000477289 CIRBPQ14011 172 aaKnown RBP2.91□□□□□ -1.94
NSMCE4A-208ENST00000477289 WFDC2Q14508 124 aa2.91□□□□□ -1.94
NSMCE4A-208ENST00000477289 MEIG1Q5JSS6 88 aa2.91□□□□□ -1.94
NSMCE4A-208ENST00000477289 NOTCH2NLQ7Z3S9 236 aa2.91□□□□□ -1.94
NSMCE4A-208ENST00000477289 STPG4Q8N801 248 aa2.91□□□□□ -1.94
NSMCE4A-208ENST00000477289 PLECQ15149 4684 aaKnown RBP2.9□□□□□ -1.94
NSMCE4A-208ENST00000477289 TMEM223A0PJW6 202 aa2.9□□□□□ -1.95
NSMCE4A-208ENST00000477289 LEPROTO15243 131 aa2.9□□□□□ -1.95
NSMCE4A-208ENST00000477289 NUPR1O60356 82 aa2.9□□□□□ -1.95
NSMCE4A-208ENST00000477289 C3orf79P0CE67 100 aa2.9□□□□□ -1.95
NSMCE4A-208ENST00000477289 NMUP48645 174 aa2.9□□□□□ -1.95
NSMCE4A-208ENST00000477289 HERV-K104P63124 156 aa2.9□□□□□ -1.95
NSMCE4A-208ENST00000477289 GAGE2BQ13066 116 aa2.9□□□□□ -1.95
NSMCE4A-208ENST00000477289 MAJINQ3KP22 176 aa2.9□□□□□ -1.95
NSMCE4A-208ENST00000477289 Q6ZRU5 148 aa2.9□□□□□ -1.95
NSMCE4A-208ENST00000477289 C7orf33Q8WU49 177 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms