RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 IGLC3P0DOY3 106 aa8.56□□□□□ -1.04
HLA-DPA1-246ENST00000476642 LINC00310P59036 64 aa8.56□□□□□ -1.04
HLA-DPA1-246ENST00000476642 KRTAP10-1P60331 282 aa8.56□□□□□ -1.04
HLA-DPA1-246ENST00000476642 CARD19Q96LW7 228 aa8.56□□□□□ -1.04
HLA-DPA1-246ENST00000476642 CDKN2A-AS1Q9UH64 79 aa8.56□□□□□ -1.04
HLA-DPA1-246ENST00000476642 CHAC1Q9BUX1 264 aa8.55□□□□□ -1.04
HLA-DPA1-246ENST00000476642 CHTOPQ9Y3Y2 248 aaKnown RBP8.55□□□□□ -1.04
HLA-DPA1-246ENST00000476642 HSPG2P98160 4391 aa8.54□□□□□ -1.04
HLA-DPA1-246ENST00000476642 NDUFA1O15239 70 aa8.54□□□□□ -1.04
HLA-DPA1-246ENST00000476642 RNF151Q2KHN1 245 aa8.54□□□□□ -1.04
HLA-DPA1-246ENST00000476642 Q8IZM0 81 aa8.54□□□□□ -1.04
HLA-DPA1-246ENST00000476642 PAM16Q9Y3D7 125 aa8.54□□□□□ -1.04
HLA-DPA1-246ENST00000476642 F8VRH5 84 aa8.53□□□□□ -1.04
HLA-DPA1-246ENST00000476642 NUPR1O60356 82 aa8.53□□□□□ -1.04
HLA-DPA1-246ENST00000476642 SLPIP03973 132 aa8.53□□□□□ -1.04
HLA-DPA1-246ENST00000476642 CXCL5P42830 114 aa8.53□□□□□ -1.04
HLA-DPA1-246ENST00000476642 HNRNPA3P51991 378 aaKnown RBP8.53□□□□□ -1.04
HLA-DPA1-246ENST00000476642 C6orf226Q5I0X4 101 aa8.53□□□□□ -1.04
HLA-DPA1-246ENST00000476642 MAP1LC3CQ9BXW4 147 aa8.53□□□□□ -1.04
HLA-DPA1-246ENST00000476642 EPM2AB3EWF7 344 aa8.52□□□□□ -1.05
HLA-DPA1-246ENST00000476642 CKS1BP61024 79 aa8.52□□□□□ -1.05
HLA-DPA1-246ENST00000476642 SPATA45Q537H7 98 aa8.52□□□□□ -1.05
HLA-DPA1-246ENST00000476642 SDIM1Q6ZPB5 146 aa8.52□□□□□ -1.05
HLA-DPA1-246ENST00000476642 Q6ZSA8 131 aa8.52□□□□□ -1.05
HLA-DPA1-246ENST00000476642 LINC00526Q96FQ7 95 aa8.52□□□□□ -1.05
HLA-DPA1-246ENST00000476642 MRPL35Q9NZE8 188 aaKnown RBP8.52□□□□□ -1.05
HLA-DPA1-246ENST00000476642 TOMM7Q9P0U1 55 aa8.52□□□□□ -1.05
HLA-DPA1-246ENST00000476642 KRTDAPP60985 99 aa8.51□□□□□ -1.05
HLA-DPA1-246ENST00000476642 LINC01620Q4KN68 170 aa8.51□□□□□ -1.05
HLA-DPA1-246ENST00000476642 LINC00474Q9P2X8 69 aa8.51□□□□□ -1.05
HLA-DPA1-246ENST00000476642 LRP1BQ9NZR2 4599 aa8.51□□□□□ -1.05
HLA-DPA1-246ENST00000476642 TRBV30A0A0K0K1B3 111 aa8.5□□□□□ -1.05
HLA-DPA1-246ENST00000476642 LOC107984640A0A0U1RRK4 108 aa8.5□□□□□ -1.05
HLA-DPA1-246ENST00000476642 SMIM1B2RUZ4 78 aa8.5□□□□□ -1.05
HLA-DPA1-246ENST00000476642 ZNF22P17026 224 aaPredicted RBP8.5□□□□□ -1.05
HLA-DPA1-246ENST00000476642 KIAA0087Q14695 138 aa8.5□□□□□ -1.05
HLA-DPA1-246ENST00000476642 TMEM170BQ5T4T1 132 aa8.5□□□□□ -1.05
HLA-DPA1-246ENST00000476642 Q6ZRU5 148 aa8.5□□□□□ -1.05
HLA-DPA1-246ENST00000476642 H0Y8G0 127 aa8.49□□□□□ -1.05
HLA-DPA1-246ENST00000476642 PLNP26678 52 aa8.49□□□□□ -1.05
HLA-DPA1-246ENST00000476642 BATFQ16520 125 aa8.49□□□□□ -1.05
HLA-DPA1-246ENST00000476642 SFTA2Q6UW10 78 aa8.49□□□□□ -1.05
HLA-DPA1-246ENST00000476642 PET117Q6UWS5 81 aa8.49□□□□□ -1.05
HLA-DPA1-246ENST00000476642 COX7B2Q8TF08 81 aa8.49□□□□□ -1.05
HLA-DPA1-246ENST00000476642 DNAH5Q8TE73 4624 aa8.49□□□□□ -1.05
HLA-DPA1-246ENST00000476642 C11orf86A6NJI1 115 aa8.48□□□□□ -1.05
HLA-DPA1-246ENST00000476642 SPINK8P0C7L1 97 aa8.48□□□□□ -1.05
HLA-DPA1-246ENST00000476642 INAFM2P0DMQ5 153 aa8.48□□□□□ -1.05
HLA-DPA1-246ENST00000476642 PCP4P48539 62 aa8.48□□□□□ -1.05
HLA-DPA1-246ENST00000476642 ODF1Q14990 250 aa8.48□□□□□ -1.05
HLA-DPA1-246ENST00000476642 DPH3Q96FX2 82 aa8.48□□□□□ -1.05
HLA-DPA1-246ENST00000476642 PTTG1IPP53801 180 aa8.47□□□□□ -1.05
HLA-DPA1-246ENST00000476642 ANKRD39Q53RE8 183 aa8.47□□□□□ -1.05
HLA-DPA1-246ENST00000476642 FAM30AQ9NZY2 134 aa8.47□□□□□ -1.05
HLA-DPA1-246ENST00000476642 IGLV5-39A0A0G2JS06 123 aa8.46□□□□□ -1.06
HLA-DPA1-246ENST00000476642 DPM2O94777 84 aa8.46□□□□□ -1.06
HLA-DPA1-246ENST00000476642 TLX1NBP0CAT3 122 aa8.46□□□□□ -1.06
HLA-DPA1-246ENST00000476642 XGP55808 180 aa8.46□□□□□ -1.06
HLA-DPA1-246ENST00000476642 UBE2V1Q13404 147 aa8.46□□□□□ -1.06
HLA-DPA1-246ENST00000476642 CIRBPQ14011 172 aaKnown RBP8.46□□□□□ -1.06
HLA-DPA1-246ENST00000476642 UNQ6190/PRO20217Q6UXQ8 127 aa8.46□□□□□ -1.06
HLA-DPA1-246ENST00000476642 SYS1-DBNDD2H3BUS1 97 aa8.45□□□□□ -1.06
HLA-DPA1-246ENST00000476642 C3orf79P0CE67 100 aa8.45□□□□□ -1.06
HLA-DPA1-246ENST00000476642 C2orf82Q6UX34 121 aa8.45□□□□□ -1.06
HLA-DPA1-246ENST00000476642 TMEM223A0PJW6 202 aa8.44□□□□□ -1.06
HLA-DPA1-246ENST00000476642 IGKCP01834 107 aa8.44□□□□□ -1.06
HLA-DPA1-246ENST00000476642 HERVK_113P61574 105 aa8.44□□□□□ -1.06
HLA-DPA1-246ENST00000476642 RPL18AQ02543 176 aaKnown RBP8.44□□□□□ -1.06
HLA-DPA1-246ENST00000476642 SCXQ7RTU7 201 aa8.44□□□□□ -1.06
HLA-DPA1-246ENST00000476642 SPACA4Q8TDM5 124 aa8.44□□□□□ -1.06
HLA-DPA1-246ENST00000476642 C6orf48Q9UBA6 75 aa8.44□□□□□ -1.06
HLA-DPA1-246ENST00000476642 APOBP04114 4563 aaKnown RBP8.44□□□□□ -1.06
HLA-DPA1-246ENST00000476642 A0A096LNI7 61 aa8.43□□□□□ -1.06
HLA-DPA1-246ENST00000476642 IGKV2-24A0A0C4DH68 120 aa8.43□□□□□ -1.06
HLA-DPA1-246ENST00000476642 NDUFC2-KCTD14E9PQ53 114 aa8.43□□□□□ -1.06
HLA-DPA1-246ENST00000476642 GAGE2BQ13066 116 aa8.43□□□□□ -1.06
HLA-DPA1-246ENST00000476642 MAJINQ3KP22 176 aa8.43□□□□□ -1.06
HLA-DPA1-246ENST00000476642 C10orf25Q5T742 122 aa8.43□□□□□ -1.06
HLA-DPA1-246ENST00000476642 Q5VSD8 79 aa8.43□□□□□ -1.06
HLA-DPA1-246ENST00000476642 CIRBP-AS1Q8TBR5 109 aa8.43□□□□□ -1.06
HLA-DPA1-246ENST00000476642 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.43□□□□□ -1.06
HLA-DPA1-246ENST00000476642 DMBT1Q9UGM3 2413 aaPredicted RBP8.43□□□□□ -1.06
HLA-DPA1-246ENST00000476642 HSBP1L1C9JCN9 74 aa8.42□□□□□ -1.06
HLA-DPA1-246ENST00000476642 STPG4Q8N801 248 aa8.42□□□□□ -1.06
HLA-DPA1-246ENST00000476642 PMCHL2Q9BQD1 86 aa8.42□□□□□ -1.06
HLA-DPA1-246ENST00000476642 FAM229AH3BQW9 127 aa8.41□□□□□ -1.06
HLA-DPA1-246ENST00000476642 CHTF8P0CG12 524 aa8.41□□□□□ -1.06
HLA-DPA1-246ENST00000476642 A0A087WYN8 130 aa8.4□□□□□ -1.06
HLA-DPA1-246ENST00000476642 LINC01545Q5VT33 79 aa8.4□□□□□ -1.06
HLA-DPA1-246ENST00000476642 PLEKHB2Q96CS7 222 aa8.4□□□□□ -1.06
HLA-DPA1-246ENST00000476642 PLAC8Q9NZF1 115 aa8.4□□□□□ -1.06
HLA-DPA1-246ENST00000476642 SMR3BP02814 79 aaPredicted RBP8.39□□□□□ -1.07
HLA-DPA1-246ENST00000476642 COX17Q14061 63 aa8.39□□□□□ -1.07
HLA-DPA1-246ENST00000476642 PANO1I0J062 215 aa8.38□□□□□ -1.07
HLA-DPA1-246ENST00000476642 LEPROTO15243 131 aa8.38□□□□□ -1.07
HLA-DPA1-246ENST00000476642 HERV-K104P63124 156 aa8.38□□□□□ -1.07
HLA-DPA1-246ENST00000476642 HAMPP81172 84 aa8.38□□□□□ -1.07
HLA-DPA1-246ENST00000476642 GAGE2EQ4V326 116 aa8.38□□□□□ -1.07
HLA-DPA1-246ENST00000476642 Q6ZRP5 223 aa8.38□□□□□ -1.07
HLA-DPA1-246ENST00000476642 GAGE2DQ9UEU5 116 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 255.2 ms