RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 LINC01547P58512 204 aaPredicted RBP9.47□□□□□ -0.89
APOBEC3F-203ENST00000476513 TNFRSF6BO95407 300 aa9.46□□□□□ -0.9
APOBEC3F-203ENST00000476513 CKS2P33552 79 aa9.46□□□□□ -0.9
APOBEC3F-203ENST00000476513 LINC01561Q8N1V8 128 aa9.46□□□□□ -0.9
APOBEC3F-203ENST00000476513 PPDPFQ9H3Y8 114 aa9.46□□□□□ -0.9
APOBEC3F-203ENST00000476513 V9GYV3 84 aa9.46□□□□□ -0.9
APOBEC3F-203ENST00000476513 MT-ND4LP03901 98 aa9.45□□□□□ -0.9
APOBEC3F-203ENST00000476513 FAM229BQ4G0N7 80 aa9.45□□□□□ -0.9
APOBEC3F-203ENST00000476513 SMIM7Q9BQ49 75 aa9.45□□□□□ -0.9
APOBEC3F-203ENST00000476513 IGLV4-3A0A075B6K6 122 aa9.44□□□□□ -0.9
APOBEC3F-203ENST00000476513 RPL37AP8A6NKH3 93 aa9.44□□□□□ -0.9
APOBEC3F-203ENST00000476513 PRSS2P07478 247 aa9.44□□□□□ -0.9
APOBEC3F-203ENST00000476513 IFI27P40305 119 aaPredicted RBP9.44□□□□□ -0.9
APOBEC3F-203ENST00000476513 CKS1BP61024 79 aa9.44□□□□□ -0.9
APOBEC3F-203ENST00000476513 KRTAP13-1Q8IUC0 172 aa9.44□□□□□ -0.9
APOBEC3F-203ENST00000476513 NAT8Q9UHE5 227 aa9.44□□□□□ -0.9
APOBEC3F-203ENST00000476513 CTAG1AP78358 180 aa9.43□□□□□ -0.9
APOBEC3F-203ENST00000476513 LINC00167Q96N53 147 aa9.43□□□□□ -0.9
APOBEC3F-203ENST00000476513 YPEL4Q96NS1 127 aa9.43□□□□□ -0.9
APOBEC3F-203ENST00000476513 TOMM7Q9P0U1 55 aa9.43□□□□□ -0.9
APOBEC3F-203ENST00000476513 NAT8BQ9UHF3 227 aa9.43□□□□□ -0.9
APOBEC3F-203ENST00000476513 PYGO1Q9Y3Y4 419 aa9.43□□□□□ -0.9
APOBEC3F-203ENST00000476513 C6orf226Q5I0X4 101 aa9.42□□□□□ -0.9
APOBEC3F-203ENST00000476513 TMEM141Q96I45 108 aa9.42□□□□□ -0.9
APOBEC3F-203ENST00000476513 IGKV2D-26A0A0A0MRZ7 120 aa9.41□□□□□ -0.9
APOBEC3F-203ENST00000476513 D6R8Y8 96 aa9.41□□□□□ -0.9
APOBEC3F-203ENST00000476513 NPYP01303 97 aa9.41□□□□□ -0.9
APOBEC3F-203ENST00000476513 Q6ZN92 141 aa9.41□□□□□ -0.9
APOBEC3F-203ENST00000476513 GAGE10A6NGK3 116 aa9.4□□□□□ -0.9
APOBEC3F-203ENST00000476513 UBE2AP49459 152 aa9.4□□□□□ -0.9
APOBEC3F-203ENST00000476513 Q8IZM0 81 aa9.4□□□□□ -0.9
APOBEC3F-203ENST00000476513 KRTAP4-1Q9BYQ7 146 aa9.4□□□□□ -0.9
APOBEC3F-203ENST00000476513 RAB5AP20339 215 aa9.39□□□□□ -0.91
APOBEC3F-203ENST00000476513 RAB5BP61020 215 aa9.39□□□□□ -0.91
APOBEC3F-203ENST00000476513 ASB16-AS1Q495Z4 193 aa9.39□□□□□ -0.91
APOBEC3F-203ENST00000476513 TEX43Q6ZNM6 134 aa9.39□□□□□ -0.91
APOBEC3F-203ENST00000476513 ALKBH7Q9BT30 221 aaPredicted RBP9.39□□□□□ -0.91
APOBEC3F-203ENST00000476513 RPL23P62829 140 aaKnown RBP9.38□□□□□ -0.91
APOBEC3F-203ENST00000476513 ZC2HC1BQ5TFG8 222 aa9.38□□□□□ -0.91
APOBEC3F-203ENST00000476513 ANAPC16Q96DE5 110 aa9.38□□□□□ -0.91
APOBEC3F-203ENST00000476513 A0A1B0GW15 77 aa9.37□□□□□ -0.91
APOBEC3F-203ENST00000476513 F8VRH5 84 aa9.37□□□□□ -0.91
APOBEC3F-203ENST00000476513 C2orf88Q9BSF0 95 aa9.37□□□□□ -0.91
APOBEC3F-203ENST00000476513 SMIM27A0A1W2PRY6 76 aa9.36□□□□□ -0.91
APOBEC3F-203ENST00000476513 LINC00337Q8N6G1 96 aa9.36□□□□□ -0.91
APOBEC3F-203ENST00000476513 ADIRFQ15847 76 aa9.35□□□□□ -0.91
APOBEC3F-203ENST00000476513 PPBPP02775 128 aa9.34□□□□□ -0.91
APOBEC3F-203ENST00000476513 KRTAP13-3Q3SY46 172 aa9.34□□□□□ -0.91
APOBEC3F-203ENST00000476513 FP248Q71RG6 208 aaPredicted RBP9.34□□□□□ -0.91
APOBEC3F-203ENST00000476513 C3orf22Q8N5N4 141 aa9.34□□□□□ -0.91
APOBEC3F-203ENST00000476513 AMELXQ99217 191 aa9.34□□□□□ -0.91
APOBEC3F-203ENST00000476513 IGLV5-37A0A075B6J1 123 aa9.33□□□□□ -0.92
APOBEC3F-203ENST00000476513 MRPL54Q6P161 138 aaKnown RBP9.33□□□□□ -0.92
APOBEC3F-203ENST00000476513 VCX2Q9H322 139 aa9.33□□□□□ -0.92
APOBEC3F-203ENST00000476513 C2orf66Q6UXQ4 117 aa9.32□□□□□ -0.92
APOBEC3F-203ENST00000476513 FAM19A3Q7Z5A8 133 aa9.32□□□□□ -0.92
APOBEC3F-203ENST00000476513 CDKN2A-AS1Q9UH64 79 aa9.32□□□□□ -0.92
APOBEC3F-203ENST00000476513 A0A1B0GXF2 115 aa9.31□□□□□ -0.92
APOBEC3F-203ENST00000476513 S100A8P05109 93 aa9.31□□□□□ -0.92
APOBEC3F-203ENST00000476513 S100PP25815 95 aa9.31□□□□□ -0.92
APOBEC3F-203ENST00000476513 PRLHP81277 87 aa9.31□□□□□ -0.92
APOBEC3F-203ENST00000476513 ORMDL3Q8N138 153 aa9.31□□□□□ -0.92
APOBEC3F-203ENST00000476513 PRELID3AQ96N28 172 aa9.31□□□□□ -0.92
APOBEC3F-203ENST00000476513 IGKV2-28A0A075B6P5 120 aa9.3□□□□□ -0.92
APOBEC3F-203ENST00000476513 C5orf52A6NGY3 159 aa9.3□□□□□ -0.92
APOBEC3F-203ENST00000476513 IGKV2D-28P01615 120 aa9.3□□□□□ -0.92
APOBEC3F-203ENST00000476513 CXCL5P42830 114 aa9.3□□□□□ -0.92
APOBEC3F-203ENST00000476513 SPAG11AQ6PDA7 123 aa9.3□□□□□ -0.92
APOBEC3F-203ENST00000476513 NKAPP1Q8N9T2 125 aa9.3□□□□□ -0.92
APOBEC3F-203ENST00000476513 CYSLTR1Q9Y271 337 aa9.3□□□□□ -0.92
APOBEC3F-203ENST00000476513 S100A6P06703 90 aa9.29□□□□□ -0.92
APOBEC3F-203ENST00000476513 SEC61BP60468 96 aaKnown RBP9.29□□□□□ -0.92
APOBEC3F-203ENST00000476513 HERVK_113P63121 156 aa9.29□□□□□ -0.92
APOBEC3F-203ENST00000476513 TMEM136Q6ZRR5 245 aa9.29□□□□□ -0.92
APOBEC3F-203ENST00000476513 PLEKHB2Q96CS7 222 aa9.28□□□□□ -0.92
APOBEC3F-203ENST00000476513 TRAV9-1A0A075B6T8 112 aa9.27□□□□□ -0.93
APOBEC3F-203ENST00000476513 LOC389332A0A1B0GUA5 103 aa9.27□□□□□ -0.93
APOBEC3F-203ENST00000476513 IGIPA6NJ69 53 aa9.27□□□□□ -0.93
APOBEC3F-203ENST00000476513 PRSS47A8MTI9 375 aa9.27□□□□□ -0.93
APOBEC3F-203ENST00000476513 NPSP0C0P6 89 aa9.27□□□□□ -0.93
APOBEC3F-203ENST00000476513 FAM19A1Q7Z5A9 133 aa9.27□□□□□ -0.93
APOBEC3F-203ENST00000476513 SNRPEP62304 92 aaKnown RBP9.26□□□□□ -0.93
APOBEC3F-203ENST00000476513 SEC11AP67812 179 aa9.26□□□□□ -0.93
APOBEC3F-203ENST00000476513 LCE2CQ5TA81 110 aa9.26□□□□□ -0.93
APOBEC3F-203ENST00000476513 GEMIN7Q9H840 131 aaKnown RBP9.26□□□□□ -0.93
APOBEC3F-203ENST00000476513 TMEM238C9JI98 176 aa9.25□□□□□ -0.93
APOBEC3F-203ENST00000476513 TMEM126AQ9H061 195 aa9.25□□□□□ -0.93
APOBEC3F-203ENST00000476513 SMIM1B2RUZ4 78 aa9.24□□□□□ -0.93
APOBEC3F-203ENST00000476513 TRGC2P03986 189 aa9.24□□□□□ -0.93
APOBEC3F-203ENST00000476513 COX7B2Q8TF08 81 aa9.24□□□□□ -0.93
APOBEC3F-203ENST00000476513 MAP1LC3AQ9H492 121 aa9.24□□□□□ -0.93
APOBEC3F-203ENST00000476513 C4orf48Q5BLP8 95 aa9.23□□□□□ -0.93
APOBEC3F-203ENST00000476513 LINC00518Q8N0U6 118 aa9.23□□□□□ -0.93
APOBEC3F-203ENST00000476513 Q8N8P6 123 aa9.23□□□□□ -0.93
APOBEC3F-203ENST00000476513 HIST1H2BKO60814 126 aa9.22□□□□□ -0.93
APOBEC3F-203ENST00000476513 HIST1H2BJP06899 126 aa9.22□□□□□ -0.93
APOBEC3F-203ENST00000476513 HIST1H2BOP23527 126 aa9.22□□□□□ -0.93
APOBEC3F-203ENST00000476513 HIST1H2BBP33778 126 aa9.22□□□□□ -0.93
APOBEC3F-203ENST00000476513 HIST1H2BDP58876 126 aa9.22□□□□□ -0.93
APOBEC3F-203ENST00000476513 HIST1H2BCP62807 126 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms