RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 EPDR1Q9UM22 224 aa1.61□□□□□ -2.15
PTCD3-211ENST00000476215 LY96Q9Y6Y9 160 aa1.61□□□□□ -2.15
PTCD3-211ENST00000476215 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
PTCD3-211ENST00000476215 A0A087WTM6 91 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 TRAV21A0A0B4J279 112 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 IBA57-AS1B1ANH7 110 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 C9JCJ5 164 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 M0R381 172 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 HMGB3O15347 200 aaKnown RBP1.6□□□□□ -2.15
PTCD3-211ENST00000476215 SMR3BP02814 79 aaPredicted RBP1.6□□□□□ -2.15
PTCD3-211ENST00000476215 TCRAP04437 139 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 GCHFRP30047 84 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 SRIP30626 198 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 ZNF80P51504 273 aaPredicted RBP1.6□□□□□ -2.15
PTCD3-211ENST00000476215 DEFA1P59665 94 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 DEFA3P59666 94 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 UBE2L3P68036 154 aaKnown RBP1.6□□□□□ -2.15
PTCD3-211ENST00000476215 SERF2P84101 59 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 ACOT6Q3I5F7 207 aaPredicted RBP1.6□□□□□ -2.15
PTCD3-211ENST00000476215 KHDC3LQ587J8 217 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 Q5BKY6 102 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 FAM74A1Q5RGS3 127 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 CFAP126Q5VTH2 177 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 DPPA3Q6W0C5 159 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 WFDC10BQ8IUB3 73 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 DAND5Q8N907 189 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 ASB13Q8WXK3 278 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 PTH2Q96A98 100 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 UBR4Q5T4S7 5183 aa1.6□□□□□ -2.15
PTCD3-211ENST00000476215 TRBV6-4A0A1B0GX49 114 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 A0A1W2PRE2 83 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 IGKV2-29A2NJV5 120 aaPredicted RBP1.59□□□□□ -2.15
PTCD3-211ENST00000476215 FABP5P3A8MUU1 101 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 F6UZH7 168 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 IFNA7P01567 189 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 TYMSP04818 313 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 ARL14EPLP0DKL9 152 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 CRIP1P50238 77 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 GNG5P63218 68 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 LINC01556Q5JQF7 62 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 SAPCD1Q5SSQ6 148 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 LELP1Q5T871 98 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 Q6ZSA8 131 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 C10orf126Q8N4M7 172 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 C5orf17Q8NAS9 161 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 ATP6V0E2Q8NHE4 81 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 AQP10Q96PS8 301 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 PRADC1Q9BSG0 188 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 PSMG3Q9BT73 122 aaPredicted RBP1.59□□□□□ -2.15
PTCD3-211ENST00000476215 TMEM167BQ9NRX6 74 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 TNFSF18Q9UNG2 199 aa1.59□□□□□ -2.15
PTCD3-211ENST00000476215 HMCN2Q8NDA2 5059 aa1.59□□□□□ -2.16
PTCD3-211ENST00000476215 A0A087WWC5 75 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 A8MWV9 139 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 IGHV3-30P01768 117 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 IGHV3-33P01772 117 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 C1QBP02746 253 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 IGHV3-30-5P0DP03 117 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 MGST1P10620 155 aaKnown RBP1.58□□□□□ -2.16
PTCD3-211ENST00000476215 RNASE3P12724 160 aaKnown RBP1.58□□□□□ -2.16
PTCD3-211ENST00000476215 CDC34P49427 236 aaPredicted RBP1.58□□□□□ -2.16
PTCD3-211ENST00000476215 RHOHQ15669 191 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 Q5VSD8 79 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 RPL7L1Q6DKI1 246 aaKnown RBP1.58□□□□□ -2.16
PTCD3-211ENST00000476215 Q8N814 137 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 OR2T35Q8NGX2 323 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 SFRP2Q96HF1 295 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 TMEM70Q9BUB7 260 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 SH3BGRL3Q9H299 93 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 BATF3Q9NR55 127 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 IL36BQ9NZH7 164 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 ZFP30Q9Y2G7 519 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 PKHD1L1Q86WI1 4243 aa1.58□□□□□ -2.16
PTCD3-211ENST00000476215 FXYD6-FXYD2A0A087WZ82 144 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 TMSB15BA0A087X1C1 80 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 BORCS7-ASMTA0A0B4J1R7 106 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 TRBV6-1A0A0K0K1D8 114 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 CTXND1A0A1B0GTU2 59 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 ARMS2P0C7Q2 107 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 LINC00694P0DN24 101 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 S100A4P26447 101 aaKnown RBP1.57□□□□□ -2.16
PTCD3-211ENST00000476215 ASIPP42127 132 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 UBE2G2P60604 165 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 HAMPP81172 84 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 WFDC2Q14508 124 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 SPACA4Q8TDM5 124 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 SMCR5Q8TEV8 140 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 MBD3L1Q8WWY6 194 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 ZC2HC1AQ96GY0 325 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 ARL2-SNX15V9GYD0 113 aa1.57□□□□□ -2.16
PTCD3-211ENST00000476215 TNXBP22105 4242 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 TRBV7-3A0A075B6L6 115 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 A0A087WX48 190 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 TRBV10-1A0A0K0K1A3 114 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 MAP1LC3B2A6NCE7 125 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 TMEM262E9PQX1 116 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 H3BVH4 76 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 M0R036 132 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 TPT1P13693 172 aaKnown RBP1.56□□□□□ -2.16
PTCD3-211ENST00000476215 RAB4BP61018 213 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms