RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 ETDBQ3ZM63 59 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 ZNF876PQ49A33 203 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 C1orf134Q5TEV5 83 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 C1orf158Q8N1D5 194 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 ZNRF2Q8NHG8 242 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 TIMM17AQ99595 171 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 PRO0461Q9UI25 63 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 LRP1BQ9NZR2 4599 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 TRBV27A0A0K0K1C4 114 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 NBDYA0A0U1RRE5 68 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 TMEM223A0PJW6 202 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 F8W1H4 67 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 H7C2G1 150 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 I3L3M4 83 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 J3QQQ9 107 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 RTL8CO15255 209 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 SCGB1C2P0DMR2 95 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 HTN3P15516 51 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 UBE2D1P51668 147 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 RNASE13Q5GAN3 156 aaKnown RBP2.92□□□□□ -1.94
VPS13D-206ENST00000476045 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 LINC00612Q8N6U2 182 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 C20orf203Q8NBC4 194 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 LINC01587Q99440 93 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 LINC00467Q9BRT7 94 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 UPK3BQ9BT76 320 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 GTSF1LQ9H1H1 148 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 VCX2Q9H322 139 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 ABCA13Q86UQ4 5058 aa2.92□□□□□ -1.94
VPS13D-206ENST00000476045 IGLV4-3A0A075B6K6 122 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.91□□□□□ -1.94
VPS13D-206ENST00000476045 IGHV3-38A0A0C4DH36 116 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 PLAC8L1A1L4L8 177 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 IGKV2-29A2NJV5 120 aaPredicted RBP2.91□□□□□ -1.94
VPS13D-206ENST00000476045 TMEM238C9JI98 176 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 F5H768 121 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 J3QR89 54 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 CDK2AP2O75956 126 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 GAGE7O76087 117 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 IGHV3-30P01768 117 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 CFC1BP0CG36 223 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 CFC1P0CG37 223 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 GAGE12FP0CL80 117 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 GAGE12GP0CL81 117 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 GAGE12IP0CL82 117 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 IGHV3-30-5P0DP03 117 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 AZU1P20160 251 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 ZNF415Q09FC8 603 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 GAGE4Q13068 117 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 DAZ2Q13117 558 aaKnown RBP2.91□□□□□ -1.94
VPS13D-206ENST00000476045 NFE4Q86UQ8 179 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 MUSTN1Q8IVN3 82 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 C6orf223Q8N319 242 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 SLC25A29Q8N8R3 303 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 PTH2Q96A98 100 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 AMELXQ99217 191 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 SIGMAR1Q99720 223 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 Q9H8V8 135 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 Q9UF83 564 aa2.91□□□□□ -1.94
VPS13D-206ENST00000476045 APOBP04114 4563 aaKnown RBP2.91□□□□□ -1.94
VPS13D-206ENST00000476045 C16orf90A8MZG2 172 aa2.9□□□□□ -1.95
VPS13D-206ENST00000476045 M0R2P5 195 aa2.9□□□□□ -1.95
VPS13D-206ENST00000476045 TCL1BO95988 128 aa2.9□□□□□ -1.95
VPS13D-206ENST00000476045 SPINK8P0C7L1 97 aa2.9□□□□□ -1.95
VPS13D-206ENST00000476045 DEFB130BP0DP73 79 aa2.9□□□□□ -1.95
VPS13D-206ENST00000476045 DEFB130AP0DP74 79 aa2.9□□□□□ -1.95
VPS13D-206ENST00000476045 NPC2P61916 151 aa2.9□□□□□ -1.95
VPS13D-206ENST00000476045 SMAGPQ0VAQ4 97 aa2.9□□□□□ -1.95
VPS13D-206ENST00000476045 Q1RN00 199 aa2.9□□□□□ -1.95
VPS13D-206ENST00000476045 CFAP126Q5VTH2 177 aa2.9□□□□□ -1.95
VPS13D-206ENST00000476045 Q6ZUT4 128 aa2.9□□□□□ -1.95
VPS13D-206ENST00000476045 CARD19Q96LW7 228 aa2.9□□□□□ -1.95
VPS13D-206ENST00000476045 PRO1854Q9UHT4 67 aa2.9□□□□□ -1.95
VPS13D-206ENST00000476045 ERG28Q9UKR5 140 aa2.9□□□□□ -1.95
VPS13D-206ENST00000476045 DNAH5Q8TE73 4624 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 TRGV2A0A075B6R0 118 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 TRAV26-1A0A087WT03 109 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 TRAV8-3A0A0A6YYJ7 113 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 A0A0J9YXY3 114 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 A8MWV9 139 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 M0R2N4 97 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 RS1O15537 224 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 IGHV3-53P01767 116 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 IGHV3-33P01772 117 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 IGHV3-30-3P0DP02 117 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 UBE2D3P61077 147 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 UBE2D2P62837 147 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 LYRM7Q5U5X0 104 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 C10orf126Q8N4M7 172 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 PRR26Q8N8Z3 221 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 FAM104AQ969W3 186 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 CHCHD7Q9BUK0 85 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 TIMM21Q9BVV7 248 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 NOP10Q9NPE3 64 aaKnown RBP2.89□□□□□ -1.95
VPS13D-206ENST00000476045 ICOSQ9Y6W8 199 aa2.89□□□□□ -1.95
VPS13D-206ENST00000476045 TRGV1A0A0A0MS02 117 aa2.88□□□□□ -1.95
VPS13D-206ENST00000476045 C9JAW5 83 aa2.88□□□□□ -1.95
VPS13D-206ENST00000476045 PRSS2P07478 247 aa2.88□□□□□ -1.95
VPS13D-206ENST00000476045 ANKRD29Q8N6D5 301 aa2.88□□□□□ -1.95
VPS13D-206ENST00000476045 C11orf72Q8NBR9 251 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms