RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 FAM231DQ6ZW35 169 aa2.22□□□□□ -2.05
PRKD3-208ENST00000475912 FAM19A5Q7Z5A7 132 aaPredicted RBP2.22□□□□□ -2.05
PRKD3-208ENST00000475912 ZFP82Q8N141 532 aa2.22□□□□□ -2.05
PRKD3-208ENST00000475912 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.22□□□□□ -2.05
PRKD3-208ENST00000475912 TSKUQ8WUA8 353 aa2.22□□□□□ -2.05
PRKD3-208ENST00000475912 MUC21A0A140T8X8 626 aa2.21□□□□□ -2.06
PRKD3-208ENST00000475912 FABP5P3A8MUU1 101 aa2.21□□□□□ -2.06
PRKD3-208ENST00000475912 CCL25O15444 150 aa2.21□□□□□ -2.06
PRKD3-208ENST00000475912 IGKV4-1P06312 121 aa2.21□□□□□ -2.06
PRKD3-208ENST00000475912 RPL12P30050 165 aaKnown RBP2.21□□□□□ -2.06
PRKD3-208ENST00000475912 HBG1P69891 147 aa2.21□□□□□ -2.06
PRKD3-208ENST00000475912 HBG2P69892 147 aa2.21□□□□□ -2.06
PRKD3-208ENST00000475912 STX12Q86Y82 276 aa2.21□□□□□ -2.06
PRKD3-208ENST00000475912 C5orf17Q8NAS9 161 aa2.21□□□□□ -2.06
PRKD3-208ENST00000475912 OR10AG1Q8NH19 301 aa2.21□□□□□ -2.06
PRKD3-208ENST00000475912 SLC25A21Q9BQT8 299 aaPredicted RBP2.21□□□□□ -2.06
PRKD3-208ENST00000475912 ARL2-SNX15V9GYD0 113 aa2.21□□□□□ -2.06
PRKD3-208ENST00000475912 C9JQL5 133 aa2.2□□□□□ -2.06
PRKD3-208ENST00000475912 M0QXV9 152 aa2.2□□□□□ -2.06
PRKD3-208ENST00000475912 M0QY20 66 aa2.2□□□□□ -2.06
PRKD3-208ENST00000475912 UBE2L6O14933 153 aa2.2□□□□□ -2.06
PRKD3-208ENST00000475912 HMGB3O15347 200 aaKnown RBP2.2□□□□□ -2.06
PRKD3-208ENST00000475912 SH2D1AO60880 128 aa2.2□□□□□ -2.06
PRKD3-208ENST00000475912 FAUP35544 74 aaKnown RBP2.2□□□□□ -2.06
PRKD3-208ENST00000475912 NKX2-5P52952 324 aaPredicted RBP2.2□□□□□ -2.06
PRKD3-208ENST00000475912 TAS2R45P59539 299 aa2.2□□□□□ -2.06
PRKD3-208ENST00000475912 UBE2BP63146 152 aa2.2□□□□□ -2.06
PRKD3-208ENST00000475912 SS18Q15532 418 aa2.2□□□□□ -2.06
PRKD3-208ENST00000475912 KRTAP6-3Q3LI67 103 aa2.2□□□□□ -2.06
PRKD3-208ENST00000475912 SAPCD1Q5SSQ6 148 aa2.2□□□□□ -2.06
PRKD3-208ENST00000475912 FP248Q71RG6 208 aaPredicted RBP2.2□□□□□ -2.06
PRKD3-208ENST00000475912 Q86TA4 180 aa2.2□□□□□ -2.06
PRKD3-208ENST00000475912 TOMM5Q8N4H5 51 aa2.2□□□□□ -2.06
PRKD3-208ENST00000475912 OR5A1Q8NGJ0 315 aa2.2□□□□□ -2.06
PRKD3-208ENST00000475912 WDR61Q9GZS3 305 aaKnown RBP2.2□□□□□ -2.06
PRKD3-208ENST00000475912 MED28Q9H204 178 aa2.2□□□□□ -2.06
PRKD3-208ENST00000475912 RSL24D1Q9UHA3 163 aaKnown RBP2.2□□□□□ -2.06
PRKD3-208ENST00000475912 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.19□□□□□ -2.06
PRKD3-208ENST00000475912 LOC389332A0A1B0GUA5 103 aa2.19□□□□□ -2.06
PRKD3-208ENST00000475912 LINC00959A0A1B0GUT2 108 aa2.19□□□□□ -2.06
PRKD3-208ENST00000475912 IGKV2-29A2NJV5 120 aaPredicted RBP2.19□□□□□ -2.06
PRKD3-208ENST00000475912 CXorf1O96002 111 aa2.19□□□□□ -2.06
PRKD3-208ENST00000475912 TMEM136Q6ZRR5 245 aa2.19□□□□□ -2.06
PRKD3-208ENST00000475912 SEC22CQ9BRL7 303 aa2.19□□□□□ -2.06
PRKD3-208ENST00000475912 KCNIP2Q9NS61 270 aa2.19□□□□□ -2.06
PRKD3-208ENST00000475912 EPDR1Q9UM22 224 aa2.19□□□□□ -2.06
PRKD3-208ENST00000475912 C19orf71A6NCJ1 209 aa2.18□□□□□ -2.06
PRKD3-208ENST00000475912 C17orf112F2Z3M2 114 aa2.18□□□□□ -2.06
PRKD3-208ENST00000475912 PFDN1O60925 122 aa2.18□□□□□ -2.06
PRKD3-208ENST00000475912 NDUFB6O95139 128 aa2.18□□□□□ -2.06
PRKD3-208ENST00000475912 ATP6V1G2O95670 118 aa2.18□□□□□ -2.06
PRKD3-208ENST00000475912 ARL14EPLP0DKL9 152 aa2.18□□□□□ -2.06
PRKD3-208ENST00000475912 ESDP10768 282 aa2.18□□□□□ -2.06
PRKD3-208ENST00000475912 PVALBP20472 110 aaPredicted RBP2.18□□□□□ -2.06
PRKD3-208ENST00000475912 IL15RAQ13261 267 aa2.18□□□□□ -2.06
PRKD3-208ENST00000475912 KRTAP20-1Q3LI63 56 aa2.18□□□□□ -2.06
PRKD3-208ENST00000475912 FA2HQ7L5A8 372 aa2.18□□□□□ -2.06
PRKD3-208ENST00000475912 MRPS26Q9BYN8 205 aaKnown RBP2.18□□□□□ -2.06
PRKD3-208ENST00000475912 RBM12B-AS1Q9P1G2 102 aa2.18□□□□□ -2.06
PRKD3-208ENST00000475912 A0A1B0GXF2 115 aa2.17□□□□□ -2.06
PRKD3-208ENST00000475912 MGPP08493 103 aa2.17□□□□□ -2.06
PRKD3-208ENST00000475912 AP3S2P59780 193 aa2.17□□□□□ -2.06
PRKD3-208ENST00000475912 CTAG1AP78358 180 aa2.17□□□□□ -2.06
PRKD3-208ENST00000475912 COTL1Q14019 142 aa2.17□□□□□ -2.06
PRKD3-208ENST00000475912 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
PRKD3-208ENST00000475912 FAM229BQ4G0N7 80 aa2.17□□□□□ -2.06
PRKD3-208ENST00000475912 AMMECR1LQ6DCA0 310 aa2.17□□□□□ -2.06
PRKD3-208ENST00000475912 C1orf64Q8NEQ6 169 aa2.17□□□□□ -2.06
PRKD3-208ENST00000475912 FMC1Q96HJ9 113 aa2.17□□□□□ -2.06
PRKD3-208ENST00000475912 ZNF706Q9Y5V0 76 aaPredicted RBP2.17□□□□□ -2.06
PRKD3-208ENST00000475912 A0A087WXM4 84 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 COX7A2LO14548 114 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 NUPR1O60356 82 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 SMIM17P0DL12 118 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 S100A1P23297 94 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 GCHFRP30047 84 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 RPL28P46779 137 aaKnown RBP2.16□□□□□ -2.06
PRKD3-208ENST00000475912 SPAG11BQ08648 103 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 NDUFA5Q16718 116 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 TMEM241Q24JQ0 296 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 PYDC2Q56P42 97 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 PCOTHQ58A44 107 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 SPANXN1Q5VSR9 72 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 RASL11AQ6T310 242 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 C3orf22Q8N5N4 141 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 OR2D3Q8NGH3 330 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 AP1S3Q96PC3 154 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 SMDT1Q9H4I9 107 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 Q9H521 79 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 MRPL35Q9NZE8 188 aaKnown RBP2.16□□□□□ -2.06
PRKD3-208ENST00000475912 C6orf48Q9UBA6 75 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 V9GYH0 126 aa2.16□□□□□ -2.06
PRKD3-208ENST00000475912 MDN1Q9NU22 5596 aa2.15□□□□□ -2.06
PRKD3-208ENST00000475912 IGKV2D-26A0A0A0MRZ7 120 aa2.15□□□□□ -2.07
PRKD3-208ENST00000475912 G3V3Q6 166 aa2.15□□□□□ -2.07
PRKD3-208ENST00000475912 BCE1O60756 84 aa2.15□□□□□ -2.07
PRKD3-208ENST00000475912 LTAP01374 205 aa2.15□□□□□ -2.07
PRKD3-208ENST00000475912 UNQ6190/PRO20217Q6UXQ8 127 aa2.15□□□□□ -2.07
PRKD3-208ENST00000475912 YPEL4Q96NS1 127 aa2.15□□□□□ -2.07
PRKD3-208ENST00000475912 IMMP2LQ96T52 175 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms