RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 TM2D2Q9BX73 214 aa8.23□□□□□ -1.09
MRPL55-227ENST00000475832 FRAS1Q86XX4 4008 aa8.23□□□□□ -1.09
MRPL55-227ENST00000475832 KMT2AQ03164 3969 aa8.22□□□□□ -1.09
MRPL55-227ENST00000475832 SRSF9Q13242 221 aaKnown RBP eCLIP8.22□□□□□ -1.09
MRPL55-227ENST00000475832 C2orf91Q6ZV80 131 aa8.22□□□□□ -1.09
MRPL55-227ENST00000475832 HIST1H4GQ99525 98 aa8.22□□□□□ -1.09
MRPL55-227ENST00000475832 GCSHP23434 173 aa8.21□□□□□ -1.1
MRPL55-227ENST00000475832 MEIG1Q5JSS6 88 aa8.21□□□□□ -1.1
MRPL55-227ENST00000475832 TP73-AS1Q9UF72 201 aa8.21□□□□□ -1.1
MRPL55-227ENST00000475832 A0A0J9YXY3 114 aa8.2□□□□□ -1.1
MRPL55-227ENST00000475832 SPAG11BQ08648 103 aa8.2□□□□□ -1.1
MRPL55-227ENST00000475832 COPS9Q8WXC6 57 aa8.2□□□□□ -1.1
MRPL55-227ENST00000475832 ZNF561-AS1K7EIQ3 104 aa8.19□□□□□ -1.1
MRPL55-227ENST00000475832 TIMM17BO60830 172 aa8.19□□□□□ -1.1
MRPL55-227ENST00000475832 BATFQ16520 125 aa8.19□□□□□ -1.1
MRPL55-227ENST00000475832 Q6ZVH6 145 aa8.19□□□□□ -1.1
MRPL55-227ENST00000475832 LINC00476Q8WZB0 136 aa8.19□□□□□ -1.1
MRPL55-227ENST00000475832 SPANXB1Q9NS25 103 aaPredicted RBP8.19□□□□□ -1.1
MRPL55-227ENST00000475832 HINT1P49773 126 aaPredicted RBP8.18□□□□□ -1.1
MRPL55-227ENST00000475832 PTTG1IPP53801 180 aa8.18□□□□□ -1.1
MRPL55-227ENST00000475832 ZNF625Q96I27 306 aaPredicted RBP8.18□□□□□ -1.1
MRPL55-227ENST00000475832 NBDYA0A0U1RRE5 68 aa8.17□□□□□ -1.1
MRPL55-227ENST00000475832 TMEM238LA0A1B0GVL6 79 aa8.17□□□□□ -1.1
MRPL55-227ENST00000475832 A6NJY4 79 aa8.17□□□□□ -1.1
MRPL55-227ENST00000475832 F8WDY8 70 aa8.17□□□□□ -1.1
MRPL55-227ENST00000475832 PSCAO43653 123 aa8.17□□□□□ -1.1
MRPL55-227ENST00000475832 A6NDN8 102 aa8.16□□□□□ -1.1
MRPL55-227ENST00000475832 KRTAP26-1Q6PEX3 210 aa8.16□□□□□ -1.1
MRPL55-227ENST00000475832 CEND1Q8N111 149 aa8.16□□□□□ -1.1
MRPL55-227ENST00000475832 DNAH6Q9C0G6 4158 aa8.15□□□□□ -1.1
MRPL55-227ENST00000475832 IFITM1P13164 125 aa8.15□□□□□ -1.1
MRPL55-227ENST00000475832 LBHQ53QV2 105 aaPredicted RBP8.15□□□□□ -1.1
MRPL55-227ENST00000475832 BVES-AS1Q5T3Y7 98 aa8.15□□□□□ -1.1
MRPL55-227ENST00000475832 SPANXDQ9BXN6 97 aa8.15□□□□□ -1.1
MRPL55-227ENST00000475832 SPANXCQ9NY87 97 aa8.15□□□□□ -1.1
MRPL55-227ENST00000475832 KIAA1109Q2LD37 5005 aa8.15□□□□□ -1.1
MRPL55-227ENST00000475832 LINC00158P58513 81 aa8.14□□□□□ -1.11
MRPL55-227ENST00000475832 RPL24P83731 157 aaKnown RBP8.14□□□□□ -1.11
MRPL55-227ENST00000475832 KIAA0087Q14695 138 aa8.14□□□□□ -1.11
MRPL55-227ENST00000475832 C2orf48Q96LS8 159 aa8.14□□□□□ -1.11
MRPL55-227ENST00000475832 LY6G6CO95867 125 aa8.13□□□□□ -1.11
MRPL55-227ENST00000475832 COX17Q14061 63 aa8.13□□□□□ -1.11
MRPL55-227ENST00000475832 COL5A1-AS1Q5SY13 56 aa8.13□□□□□ -1.11
MRPL55-227ENST00000475832 NTN5Q8WTR8 489 aaPredicted RBP8.13□□□□□ -1.11
MRPL55-227ENST00000475832 CAMK2N2Q96S95 79 aa8.13□□□□□ -1.11
MRPL55-227ENST00000475832 SNHG12Q9BXW3 62 aa8.13□□□□□ -1.11
MRPL55-227ENST00000475832 ERG28Q9UKR5 140 aa8.13□□□□□ -1.11
MRPL55-227ENST00000475832 HECTD4Q9Y4D8 3996 aa8.13□□□□□ -1.11
MRPL55-227ENST00000475832 GVQW2A0A096LPI5 108 aaPredicted RBP8.12□□□□□ -1.11
MRPL55-227ENST00000475832 SMIM13P0DJ93 91 aa8.12□□□□□ -1.11
MRPL55-227ENST00000475832 HIGD2BQ4VC39 106 aa8.12□□□□□ -1.11
MRPL55-227ENST00000475832 C14orf177Q52M58 125 aa8.12□□□□□ -1.11
MRPL55-227ENST00000475832 C2orf82Q6UX34 121 aa8.12□□□□□ -1.11
MRPL55-227ENST00000475832 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.11□□□□□ -1.11
MRPL55-227ENST00000475832 TRBV30A0A0K0K1B3 111 aa8.11□□□□□ -1.11
MRPL55-227ENST00000475832 A0A0U1RRA0 63 aa8.11□□□□□ -1.11
MRPL55-227ENST00000475832 USP17L23D6RBM5 183 aa8.11□□□□□ -1.11
MRPL55-227ENST00000475832 PFN2P35080 140 aa8.11□□□□□ -1.11
MRPL55-227ENST00000475832 C15orf56Q8N910 161 aa8.11□□□□□ -1.11
MRPL55-227ENST00000475832 LITAFQ99732 161 aa8.11□□□□□ -1.11
MRPL55-227ENST00000475832 KRTAP1-5Q9BYS1 174 aa8.11□□□□□ -1.11
MRPL55-227ENST00000475832 DNAH10Q8IVF4 4471 aa8.1□□□□□ -1.11
MRPL55-227ENST00000475832 EREGO14944 169 aa8.1□□□□□ -1.11
MRPL55-227ENST00000475832 MUSTN1Q8IVN3 82 aa8.1□□□□□ -1.11
MRPL55-227ENST00000475832 DNAH2Q9P225 4427 aa8.1□□□□□ -1.11
MRPL55-227ENST00000475832 FXYD2P54710 66 aa8.09□□□□□ -1.11
MRPL55-227ENST00000475832 ADAMTSL4-AS1Q5T5F5 129 aa8.09□□□□□ -1.11
MRPL55-227ENST00000475832 UNQ6190/PRO20217Q6UXQ8 127 aa8.09□□□□□ -1.11
MRPL55-227ENST00000475832 C6orf223Q8N319 242 aa8.09□□□□□ -1.11
MRPL55-227ENST00000475832 PPDPFQ9H3Y8 114 aa8.09□□□□□ -1.11
MRPL55-227ENST00000475832 M0R2N4 97 aa8.08□□□□□ -1.12
MRPL55-227ENST00000475832 SYCNQ0VAF6 134 aa8.08□□□□□ -1.12
MRPL55-227ENST00000475832 MIR7-3HGQ8N6C7 128 aa8.08□□□□□ -1.12
MRPL55-227ENST00000475832 LINC00308Q8TCZ7 52 aa8.08□□□□□ -1.12
MRPL55-227ENST00000475832 LINC00526Q96FQ7 95 aa8.08□□□□□ -1.12
MRPL55-227ENST00000475832 NHP2Q9NX24 153 aaKnown RBP8.08□□□□□ -1.12
MRPL55-227ENST00000475832 NPC2P61916 151 aa8.07□□□□□ -1.12
MRPL55-227ENST00000475832 DAND5Q8N907 189 aa8.07□□□□□ -1.12
MRPL55-227ENST00000475832 RAB37Q96AX2 223 aa8.07□□□□□ -1.12
MRPL55-227ENST00000475832 CARD19Q96LW7 228 aa8.07□□□□□ -1.12
MRPL55-227ENST00000475832 A4D1N5 150 aa8.06□□□□□ -1.12
MRPL55-227ENST00000475832 RNF151Q2KHN1 245 aa8.06□□□□□ -1.12
MRPL55-227ENST00000475832 LECT2O14960 151 aa8.05□□□□□ -1.12
MRPL55-227ENST00000475832 C10orf25Q5T742 122 aa8.05□□□□□ -1.12
MRPL55-227ENST00000475832 Q6ZRU5 148 aa8.05□□□□□ -1.12
MRPL55-227ENST00000475832 C6orf48Q9UBA6 75 aa8.05□□□□□ -1.12
MRPL55-227ENST00000475832 PKIGQ9Y2B9 76 aa8.05□□□□□ -1.12
MRPL55-227ENST00000475832 C1orf134Q5TEV5 83 aa8.04□□□□□ -1.12
MRPL55-227ENST00000475832 Q6ZR54 194 aa8.04□□□□□ -1.12
MRPL55-227ENST00000475832 FAT2Q9NYQ8 4349 aa8.03□□□□□ -1.12
MRPL55-227ENST00000475832 A0A0B4J2C4 111 aa8.03□□□□□ -1.12
MRPL55-227ENST00000475832 A0A1B0GWB2 263 aa8.03□□□□□ -1.12
MRPL55-227ENST00000475832 C9orf116Q5BN46 136 aaPredicted RBP8.03□□□□□ -1.12
MRPL55-227ENST00000475832 SND1-IT1Q9HBX3 110 aa8.03□□□□□ -1.12
MRPL55-227ENST00000475832 ABCA13Q86UQ4 5058 aa8.03□□□□□ -1.12
MRPL55-227ENST00000475832 NDUFC2-KCTD14E9PQ53 114 aa8.02□□□□□ -1.13
MRPL55-227ENST00000475832 PRO1854Q9UHT4 67 aa8.02□□□□□ -1.13
MRPL55-227ENST00000475832 DNAH17Q9UFH2 4485 aa8.02□□□□□ -1.13
MRPL55-227ENST00000475832 CFC1BP0CG36 223 aa8.01□□□□□ -1.13
MRPL55-227ENST00000475832 CFC1P0CG37 223 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms