RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 CFAP54Q96N23 3096 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 SETD2Q9BYW2 2564 aaPredicted RBP1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 SLIT1O75093 1534 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 MAP1BP46821 2468 aaKnown RBP1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 JMJD1CQ15652 2540 aa1.9□□□□□ -2.1
SRGAP3-205ENST00000475560 ZFYVE26Q68DK2 2539 aa1.9□□□□□ -2.1
SRGAP3-205ENST00000475560 ALS2Q96Q42 1657 aa1.9□□□□□ -2.1
SRGAP3-205ENST00000475560 FAM208AQ9UK61 1670 aaKnown RBP1.9□□□□□ -2.1
SRGAP3-205ENST00000475560 LAMA4Q16363 1823 aa1.9□□□□□ -2.11
SRGAP3-205ENST00000475560 EDDM3BP56851 147 aa1.9□□□□□ -2.11
SRGAP3-205ENST00000475560 Q0VG73 95 aa1.9□□□□□ -2.11
SRGAP3-205ENST00000475560 PMCHL1Q16048 86 aa1.9□□□□□ -2.11
SRGAP3-205ENST00000475560 TOMM5Q8N4H5 51 aa1.9□□□□□ -2.11
SRGAP3-205ENST00000475560 MON2Q7Z3U7 1717 aa1.9□□□□□ -2.11
SRGAP3-205ENST00000475560 SIPA1L3O60292 1781 aaPredicted RBP1.9□□□□□ -2.11
SRGAP3-205ENST00000475560 ARFGEF2Q9Y6D5 1785 aa1.9□□□□□ -2.11
SRGAP3-205ENST00000475560 C4AP0C0L4 1744 aa1.89□□□□□ -2.11
SRGAP3-205ENST00000475560 C4BP0C0L5 1744 aa1.89□□□□□ -2.11
SRGAP3-205ENST00000475560 GYPAP02724 150 aa1.89□□□□□ -2.11
SRGAP3-205ENST00000475560 BVES-AS1Q5T3Y7 98 aa1.89□□□□□ -2.11
SRGAP3-205ENST00000475560 C10orf99Q6UWK7 81 aa1.89□□□□□ -2.11
SRGAP3-205ENST00000475560 FAM213BQ8TBF2 198 aa1.89□□□□□ -2.11
SRGAP3-205ENST00000475560 PMCHL2Q9BQD1 86 aa1.89□□□□□ -2.11
SRGAP3-205ENST00000475560 TMEM14BQ9NUH8 114 aa1.89□□□□□ -2.11
SRGAP3-205ENST00000475560 RABAC1Q9UI14 185 aa1.89□□□□□ -2.11
SRGAP3-205ENST00000475560 RGPD3A6NKT7 1758 aaPredicted RBP1.89□□□□□ -2.11
SRGAP3-205ENST00000475560 COL14A1Q05707 1796 aaKnown RBP1.89□□□□□ -2.11
SRGAP3-205ENST00000475560 C5orf42Q9H799 3197 aa1.89□□□□□ -2.11
SRGAP3-205ENST00000475560 ARFGEF1Q9Y6D6 1849 aa1.89□□□□□ -2.11
SRGAP3-205ENST00000475560 ZGRF1Q86YA3 2104 aa1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 DNAH12Q6ZR08 3092 aa1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 TRBV7-3A0A075B6L6 115 aa1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 LOC285095A0A1B0GVY8 99 aa1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 FAUP35544 74 aaKnown RBP1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 ASIPP42127 132 aa1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 S100A16Q96FQ6 103 aaKnown RBP1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 LENEPQ9Y5L5 61 aa1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 SPCS1Q9Y6A9 102 aa1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 V9GYV3 84 aa1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 BTAF1O14981 1849 aa1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 NCOR1O75376 2440 aa1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 CEP250Q9BV73 2442 aa1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 BRCA2P51587 3418 aa1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 PAPPAQ13219 1627 aa1.88□□□□□ -2.11
SRGAP3-205ENST00000475560 hADV29S1A0JD25 119 aa1.87□□□□□ -2.11
SRGAP3-205ENST00000475560 GNGT2O14610 69 aa1.87□□□□□ -2.11
SRGAP3-205ENST00000475560 TJP1Q07157 1748 aa1.87□□□□□ -2.11
SRGAP3-205ENST00000475560 DDX60LQ5H9U9 1706 aaKnown RBP1.87□□□□□ -2.11
SRGAP3-205ENST00000475560 SMIM4Q8WVI0 70 aa1.87□□□□□ -2.11
SRGAP3-205ENST00000475560 DLG5Q8TDM6 1919 aa1.87□□□□□ -2.11
SRGAP3-205ENST00000475560 LOC285556D6RIA3 1793 aa1.87□□□□□ -2.11
SRGAP3-205ENST00000475560 CFAP46Q8IYW2 2715 aa1.87□□□□□ -2.11
SRGAP3-205ENST00000475560 TSC2P49815 1807 aa1.87□□□□□ -2.11
SRGAP3-205ENST00000475560 LAMA3Q16787 3333 aa1.86□□□□□ -2.11
SRGAP3-205ENST00000475560 RICTORQ6R327 1708 aa1.86□□□□□ -2.11
SRGAP3-205ENST00000475560 SDK1Q7Z5N4 2213 aa1.86□□□□□ -2.11
SRGAP3-205ENST00000475560 SPG11Q96JI7 2443 aa1.86□□□□□ -2.11
SRGAP3-205ENST00000475560 PRB1P04280 392 aa1.86□□□□□ -2.11
SRGAP3-205ENST00000475560 KRTDAPP60985 99 aa1.86□□□□□ -2.11
SRGAP3-205ENST00000475560 MGST2Q99735 147 aa1.86□□□□□ -2.11
SRGAP3-205ENST00000475560 NDUFA4L2Q9NRX3 87 aa1.86□□□□□ -2.11
SRGAP3-205ENST00000475560 WDFY4Q6ZS81 3184 aa1.86□□□□□ -2.11
SRGAP3-205ENST00000475560 HELZ2Q9BYK8 2649 aaKnown RBP1.86□□□□□ -2.11
SRGAP3-205ENST00000475560 POLQO75417 2590 aa1.85□□□□□ -2.11
SRGAP3-205ENST00000475560 DEPDC5O75140 1603 aa1.85□□□□□ -2.11
SRGAP3-205ENST00000475560 DNHD1Q96M86 4753 aa1.85□□□□□ -2.11
SRGAP3-205ENST00000475560 SYS1-DBNDD2H3BUS1 97 aa1.85□□□□□ -2.11
SRGAP3-205ENST00000475560 H3BUT2 72 aa1.85□□□□□ -2.11
SRGAP3-205ENST00000475560 C18orf32Q8TCD1 76 aa1.85□□□□□ -2.11
SRGAP3-205ENST00000475560 PTPRZ1P23471 2315 aaPredicted RBP1.85□□□□□ -2.11
SRGAP3-205ENST00000475560 LY75O60449 1722 aa1.85□□□□□ -2.11
SRGAP3-205ENST00000475560 TOGARAM1Q9Y4F4 1720 aa1.85□□□□□ -2.11
SRGAP3-205ENST00000475560 KCPQ6ZWJ8 1503 aa1.85□□□□□ -2.11
SRGAP3-205ENST00000475560 PCLOQ9Y6V0 5065 aa1.85□□□□□ -2.11
SRGAP3-205ENST00000475560 LMO7Q8WWI1 1683 aa1.84□□□□□ -2.11
SRGAP3-205ENST00000475560 CRYM-AS1A6NIL9 109 aa1.84□□□□□ -2.11
SRGAP3-205ENST00000475560 PPP1R17O96001 155 aa1.84□□□□□ -2.11
SRGAP3-205ENST00000475560 FAM167A-AS1Q96KT0 104 aa1.84□□□□□ -2.11
SRGAP3-205ENST00000475560 C20orf78Q9BR46 151 aa1.84□□□□□ -2.11
SRGAP3-205ENST00000475560 ABRACLQ9P1F3 81 aa1.84□□□□□ -2.11
SRGAP3-205ENST00000475560 KALRNO60229 2985 aa1.84□□□□□ -2.12
SRGAP3-205ENST00000475560 SPTA1P02549 2419 aa1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 SCN7AQ01118 1682 aa1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 TNRC6CQ9HCJ0 1690 aaKnown RBP1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 A0A0G2JMZ2 1700 aa1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 LRRC37A2A6NM11 1700 aa1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 LRRC37AA6NMS7 1700 aa1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 DOT1LQ8TEK3 1739 aa1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 PRUNE2Q8WUY3 3088 aa1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 UBR4Q5T4S7 5183 aa1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 TRBV7-7A0A0K0K1E9 115 aa1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 ANGP03950 147 aaKnown RBP1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 CCL18P55774 89 aa1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 ETDBQ3ZM63 59 aa1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 PSMG4Q5JS54 123 aa1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 Q5VV11 94 aa1.83□□□□□ -2.12
SRGAP3-205ENST00000475560 Q6ZSA8 131 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms