RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 STHQ8IWL8 128 aa12.43□□□□□ -0.42
CCM2-207ENST00000475551 NDUFC2-KCTD14E9PQ53 114 aa12.42□□□□□ -0.42
CCM2-207ENST00000475551 LINC01356Q8N9X3 169 aa12.42□□□□□ -0.42
CCM2-207ENST00000475551 CREBBPQ92793 2442 aa12.42□□□□□ -0.42
CCM2-207ENST00000475551 FLNBO75369 2602 aaKnown RBP12.42□□□□□ -0.42
CCM2-207ENST00000475551 ODF3L2Q3SX64 289 aa12.42□□□□□ -0.42
CCM2-207ENST00000475551 LYPD5Q6UWN5 251 aa12.42□□□□□ -0.42
CCM2-207ENST00000475551 Q6YL49 198 aa12.41□□□□□ -0.42
CCM2-207ENST00000475551 C4orf3Q8WVX3 66 aa12.41□□□□□ -0.42
CCM2-207ENST00000475551 CR1P17927 2039 aa12.41□□□□□ -0.42
CCM2-207ENST00000475551 J3QLI3 93 aa12.4□□□□□ -0.42
CCM2-207ENST00000475551 IGKV3OR2-268A0A0C4DH90 116 aa12.4□□□□□ -0.42
CCM2-207ENST00000475551 NDUFC2O95298 119 aa12.4□□□□□ -0.42
CCM2-207ENST00000475551 FHL2Q14192 279 aa12.4□□□□□ -0.42
CCM2-207ENST00000475551 IGLV4-60A0A075B6I1 120 aa12.39□□□□□ -0.43
CCM2-207ENST00000475551 GHRHP01286 108 aa12.39□□□□□ -0.43
CCM2-207ENST00000475551 HILS1P60008 231 aa12.39□□□□□ -0.43
CCM2-207ENST00000475551 CSPG4Q6UVK1 2322 aa12.39□□□□□ -0.43
CCM2-207ENST00000475551 NOTCH2Q04721 2471 aa12.39□□□□□ -0.43
CCM2-207ENST00000475551 ITPR3Q14573 2671 aa12.39□□□□□ -0.43
CCM2-207ENST00000475551 TRBV10-3A0A0K0K1G6 114 aa12.38□□□□□ -0.43
CCM2-207ENST00000475551 IGHV4-31P0DP07 118 aa12.38□□□□□ -0.43
CCM2-207ENST00000475551 NOP10Q9NPE3 64 aaKnown RBP12.38□□□□□ -0.43
CCM2-207ENST00000475551 Q5XG85 94 aa12.38□□□□□ -0.43
CCM2-207ENST00000475551 LOC100131303A0A0U1RQF7 123 aa12.37□□□□□ -0.43
CCM2-207ENST00000475551 TMEM256-PLSCR3K7ERE1 68 aa12.37□□□□□ -0.43
CCM2-207ENST00000475551 ZANQ9Y493 2812 aa12.37□□□□□ -0.43
CCM2-207ENST00000475551 Q8N814 137 aa12.37□□□□□ -0.43
CCM2-207ENST00000475551 OTOGQ6ZRI0 2925 aa12.36□□□□□ -0.43
CCM2-207ENST00000475551 TRAV25A0A0B4J276 109 aa12.36□□□□□ -0.43
CCM2-207ENST00000475551 CYSRT1A8MQ03 144 aa12.36□□□□□ -0.43
CCM2-207ENST00000475551 TRBV6-8A0A0A6YYG3 113 aa12.35□□□□□ -0.43
CCM2-207ENST00000475551 C4orf26Q17RF5 130 aa12.35□□□□□ -0.43
CCM2-207ENST00000475551 C6orf226Q5I0X4 101 aa12.35□□□□□ -0.43
CCM2-207ENST00000475551 TMEM86BQ8N661 226 aa12.35□□□□□ -0.43
CCM2-207ENST00000475551 SETXQ7Z333 2677 aaKnown RBP12.34□□□□□ -0.43
CCM2-207ENST00000475551 TRAV23DV6A0A075B6W5 121 aa12.34□□□□□ -0.43
CCM2-207ENST00000475551 MYO9AB2RTY4 2548 aa12.34□□□□□ -0.43
CCM2-207ENST00000475551 FSHBP01225 129 aa12.34□□□□□ -0.43
CCM2-207ENST00000475551 NANOS2P60321 138 aaKnown RBP12.34□□□□□ -0.43
CCM2-207ENST00000475551 ENHOQ6UWT2 76 aa12.34□□□□□ -0.43
CCM2-207ENST00000475551 FAM19A1Q7Z5A9 133 aa12.34□□□□□ -0.43
CCM2-207ENST00000475551 WFDC9Q8NEX5 89 aa12.34□□□□□ -0.43
CCM2-207ENST00000475551 TRGV2A0A075B6R0 118 aa12.33□□□□□ -0.44
CCM2-207ENST00000475551 PLAC8L1A1L4L8 177 aa12.33□□□□□ -0.44
CCM2-207ENST00000475551 UBL5Q9BZL1 73 aa12.33□□□□□ -0.44
CCM2-207ENST00000475551 FLNAP21333 2647 aaKnown RBP12.32□□□□□ -0.44
CCM2-207ENST00000475551 LINC00959A0A1B0GUT2 108 aa12.32□□□□□ -0.44
CCM2-207ENST00000475551 KHDC1LQ5JSQ8 128 aa12.32□□□□□ -0.44
CCM2-207ENST00000475551 C16orf74Q96GX8 76 aa12.32□□□□□ -0.44
CCM2-207ENST00000475551 C11orf44Q8N8P7 122 aa12.31□□□□□ -0.44
CCM2-207ENST00000475551 A0A1W2PRX2 142 aa12.31□□□□□ -0.44
CCM2-207ENST00000475551 BCE1O60756 84 aa12.31□□□□□ -0.44
CCM2-207ENST00000475551 TRGV4A0A0C4DH28 118 aa12.3□□□□□ -0.44
CCM2-207ENST00000475551 Q8IZM0 81 aa12.3□□□□□ -0.44
CCM2-207ENST00000475551 TEX15Q9BXT5 2789 aa12.3□□□□□ -0.44
CCM2-207ENST00000475551 HRCT1Q6UXD1 115 aa12.3□□□□□ -0.44
CCM2-207ENST00000475551 C11orf68Q9H3H3 251 aaKnown RBP12.29□□□□□ -0.44
CCM2-207ENST00000475551 XCL1P47992 114 aa12.29□□□□□ -0.44
CCM2-207ENST00000475551 KRTAP1-1Q07627 177 aa12.29□□□□□ -0.44
CCM2-207ENST00000475551 C20orf197Q8N268 126 aa12.29□□□□□ -0.44
CCM2-207ENST00000475551 SMR3AQ99954 134 aa12.29□□□□□ -0.44
CCM2-207ENST00000475551 GIG44P09565 113 aaPredicted RBP12.28□□□□□ -0.44
CCM2-207ENST00000475551 FAM236DA0A1B0GTK5 79 aa12.27□□□□□ -0.45
CCM2-207ENST00000475551 FAM236CP0DP71 79 aa12.27□□□□□ -0.45
CCM2-207ENST00000475551 EPM2AB3EWF7 344 aa12.26□□□□□ -0.45
CCM2-207ENST00000475551 PRR3P79522 188 aaKnown RBP12.26□□□□□ -0.45
CCM2-207ENST00000475551 ACANP16112 2415 aa12.25□□□□□ -0.45
CCM2-207ENST00000475551 TRAV7A0A075B6U4 112 aa12.25□□□□□ -0.45
CCM2-207ENST00000475551 Q6ZQT0 140 aa12.23□□□□□ -0.45
CCM2-207ENST00000475551 COX17Q14061 63 aa12.23□□□□□ -0.45
CCM2-207ENST00000475551 LOC110117498A0A087WWA1 95 aa12.22□□□□□ -0.45
CCM2-207ENST00000475551 H7BZZ5 65 aa12.22□□□□□ -0.45
CCM2-207ENST00000475551 SERP1Q9Y6X1 66 aa12.22□□□□□ -0.45
CCM2-207ENST00000475551 RBM3P98179 157 aaKnown RBP12.21□□□□□ -0.45
CCM2-207ENST00000475551 A0A1B0GUV1 79 aa12.21□□□□□ -0.45
CCM2-207ENST00000475551 CMC4P56277 68 aaPredicted RBP12.21□□□□□ -0.45
CCM2-207ENST00000475551 LINC00575Q6W349 94 aa12.21□□□□□ -0.45
CCM2-207ENST00000475551 C6orf99Q4VX62 202 aa12.2□□□□□ -0.46
CCM2-207ENST00000475551 C2CD3Q4AC94 2353 aa12.2□□□□□ -0.46
CCM2-207ENST00000475551 TLN2Q9Y4G6 2542 aa12.19□□□□□ -0.46
CCM2-207ENST00000475551 ZNF561-AS1K7EIQ3 104 aa12.19□□□□□ -0.46
CCM2-207ENST00000475551 KLKP1Q107X0 134 aa12.19□□□□□ -0.46
CCM2-207ENST00000475551 LINC00482Q8N8I6 264 aa12.19□□□□□ -0.46
CCM2-207ENST00000475551 RNASE1P07998 156 aaKnown RBP12.19□□□□□ -0.46
CCM2-207ENST00000475551 C6orf223Q8N319 242 aa12.19□□□□□ -0.46
CCM2-207ENST00000475551 KIAA0087Q14695 138 aa12.18□□□□□ -0.46
CCM2-207ENST00000475551 CSNK1G2-AS1Q8NCQ2 148 aa12.18□□□□□ -0.46
CCM2-207ENST00000475551 MRAPQ8TCY5 172 aa12.18□□□□□ -0.46
CCM2-207ENST00000475551 HIVEP1P15822 2718 aa12.18□□□□□ -0.46
CCM2-207ENST00000475551 LINC01547P58512 204 aaPredicted RBP12.18□□□□□ -0.46
CCM2-207ENST00000475551 ANK3Q12955 4377 aaKnown RBP12.17□□□□□ -0.46
CCM2-207ENST00000475551 IGHV4-28A0A0C4DH34 117 aa12.16□□□□□ -0.46
CCM2-207ENST00000475551 CCL24O00175 119 aa12.16□□□□□ -0.46
CCM2-207ENST00000475551 RPL35AP18077 110 aaKnown RBP12.15□□□□□ -0.46
CCM2-207ENST00000475551 MXRA5Q9NR99 2828 aa12.15□□□□□ -0.46
CCM2-207ENST00000475551 Q6ZVQ6 151 aa12.15□□□□□ -0.46
CCM2-207ENST00000475551 CXCL6P80162 114 aa12.14□□□□□ -0.47
CCM2-207ENST00000475551 LAMTOR3Q9UHA4 124 aa12.14□□□□□ -0.47
CCM2-207ENST00000475551 SONP18583 2426 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms