RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 XAGE1AQ9HD64 81 aa4.19□□□□□ -1.74
HDAC3-207ENST00000475549 CDKN2A-AS1Q9UH64 79 aa4.19□□□□□ -1.74
HDAC3-207ENST00000475549 CYSLTR1Q9Y271 337 aa4.19□□□□□ -1.74
HDAC3-207ENST00000475549 C22orf24Q9Y442 160 aa4.19□□□□□ -1.74
HDAC3-207ENST00000475549 IGLV1-50A0A075B6I6 118 aa4.18□□□□□ -1.74
HDAC3-207ENST00000475549 MT-ND4LP03901 98 aa4.18□□□□□ -1.74
HDAC3-207ENST00000475549 ADCYAP1P18509 176 aa4.18□□□□□ -1.74
HDAC3-207ENST00000475549 PNRC1Q12796 327 aaPredicted RBP4.18□□□□□ -1.74
HDAC3-207ENST00000475549 KIAA1644Q3SXP7 199 aa4.18□□□□□ -1.74
HDAC3-207ENST00000475549 ORMDL2Q53FV1 153 aa4.18□□□□□ -1.74
HDAC3-207ENST00000475549 C6orf226Q5I0X4 101 aa4.18□□□□□ -1.74
HDAC3-207ENST00000475549 Q6ZN92 141 aa4.18□□□□□ -1.74
HDAC3-207ENST00000475549 PACRGQ96M98 296 aaPredicted RBP4.18□□□□□ -1.74
HDAC3-207ENST00000475549 TOMM7Q9P0U1 55 aa4.18□□□□□ -1.74
HDAC3-207ENST00000475549 K7EMI3 77 aa4.17□□□□□ -1.74
HDAC3-207ENST00000475549 ZNF861PO60384 105 aa4.17□□□□□ -1.74
HDAC3-207ENST00000475549 NPSP0C0P6 89 aa4.17□□□□□ -1.74
HDAC3-207ENST00000475549 CKS1BP61024 79 aa4.17□□□□□ -1.74
HDAC3-207ENST00000475549 UBE2BP63146 152 aa4.17□□□□□ -1.74
HDAC3-207ENST00000475549 Q8IZM0 81 aa4.17□□□□□ -1.74
HDAC3-207ENST00000475549 TOMM6Q96B49 74 aa4.17□□□□□ -1.74
HDAC3-207ENST00000475549 C2orf88Q9BSF0 95 aa4.17□□□□□ -1.74
HDAC3-207ENST00000475549 ALKBH7Q9BT30 221 aaPredicted RBP4.17□□□□□ -1.74
HDAC3-207ENST00000475549 LINC01546A6NGU7 62 aa4.16□□□□□ -1.74
HDAC3-207ENST00000475549 SMIM1B2RUZ4 78 aa4.16□□□□□ -1.74
HDAC3-207ENST00000475549 PRSS2P07478 247 aa4.16□□□□□ -1.74
HDAC3-207ENST00000475549 TIMM17AQ99595 171 aa4.16□□□□□ -1.74
HDAC3-207ENST00000475549 CTDSP1Q9GZU7 261 aa4.16□□□□□ -1.74
HDAC3-207ENST00000475549 NXT2Q9NPJ8 142 aaKnown RBP4.16□□□□□ -1.74
HDAC3-207ENST00000475549 IGLV5-45A0A087WSX0 123 aa4.15□□□□□ -1.75
HDAC3-207ENST00000475549 A0A087X002 238 aa4.15□□□□□ -1.75
HDAC3-207ENST00000475549 F8VRH5 84 aa4.15□□□□□ -1.75
HDAC3-207ENST00000475549 HERVK_113P63121 156 aa4.15□□□□□ -1.75
HDAC3-207ENST00000475549 ERASQ7Z444 233 aa4.15□□□□□ -1.75
HDAC3-207ENST00000475549 CST9LQ9H4G1 147 aa4.15□□□□□ -1.75
HDAC3-207ENST00000475549 CARHSP1Q9Y2V2 147 aaKnown RBP4.15□□□□□ -1.75
HDAC3-207ENST00000475549 RPL37AP8A6NKH3 93 aa4.14□□□□□ -1.75
HDAC3-207ENST00000475549 SEC11AP67812 179 aa4.14□□□□□ -1.75
HDAC3-207ENST00000475549 IFITM2Q01629 132 aa4.14□□□□□ -1.75
HDAC3-207ENST00000475549 CLLU1Q5K131 121 aa4.14□□□□□ -1.75
HDAC3-207ENST00000475549 MRPL55Q7Z7F7 128 aaKnown RBP4.14□□□□□ -1.75
HDAC3-207ENST00000475549 LINC00167Q96N53 147 aa4.14□□□□□ -1.75
HDAC3-207ENST00000475549 SCGB3A1Q96QR1 104 aa4.14□□□□□ -1.75
HDAC3-207ENST00000475549 KRTAP4-8Q9BYQ9 185 aa4.14□□□□□ -1.75
HDAC3-207ENST00000475549 GEMIN7Q9H840 131 aaKnown RBP4.14□□□□□ -1.75
HDAC3-207ENST00000475549 ANAPC11Q9NYG5 84 aa4.14□□□□□ -1.75
HDAC3-207ENST00000475549 TP73-AS1Q9UF72 201 aa4.14□□□□□ -1.75
HDAC3-207ENST00000475549 TINCRA0A1B0GVN0 87 aa4.13□□□□□ -1.75
HDAC3-207ENST00000475549 TMEM218A2RU14 115 aa4.13□□□□□ -1.75
HDAC3-207ENST00000475549 NUPR1O60356 82 aa4.13□□□□□ -1.75
HDAC3-207ENST00000475549 RPL13AP40429 203 aaKnown RBP4.13□□□□□ -1.75
HDAC3-207ENST00000475549 RAB14P61106 215 aa4.13□□□□□ -1.75
HDAC3-207ENST00000475549 LBHQ53QV2 105 aaPredicted RBP4.13□□□□□ -1.75
HDAC3-207ENST00000475549 PDZD11Q5EBL8 140 aa4.13□□□□□ -1.75
HDAC3-207ENST00000475549 KRTAP13-1Q8IUC0 172 aa4.13□□□□□ -1.75
HDAC3-207ENST00000475549 SVIPQ8NHG7 77 aa4.13□□□□□ -1.75
HDAC3-207ENST00000475549 COX7B2Q8TF08 81 aa4.13□□□□□ -1.75
HDAC3-207ENST00000475549 GAGE10A6NGK3 116 aa4.12□□□□□ -1.75
HDAC3-207ENST00000475549 BCE1O60756 84 aa4.12□□□□□ -1.75
HDAC3-207ENST00000475549 SCO1O75880 301 aa4.12□□□□□ -1.75
HDAC3-207ENST00000475549 TSPAN13O95857 204 aa4.12□□□□□ -1.75
HDAC3-207ENST00000475549 SPINK8P0C7L1 97 aa4.12□□□□□ -1.75
HDAC3-207ENST00000475549 G0S2P27469 103 aa4.12□□□□□ -1.75
HDAC3-207ENST00000475549 RAB5BP61020 215 aa4.12□□□□□ -1.75
HDAC3-207ENST00000475549 PRR4Q16378 134 aa4.12□□□□□ -1.75
HDAC3-207ENST00000475549 PAPPA-AS1Q5QFB9 102 aa4.12□□□□□ -1.75
HDAC3-207ENST00000475549 GNB1LQ9BYB4 327 aa4.12□□□□□ -1.75
HDAC3-207ENST00000475549 IGLV5-37A0A075B6J1 123 aa4.11□□□□□ -1.75
HDAC3-207ENST00000475549 A0A096LNJ9 63 aa4.11□□□□□ -1.75
HDAC3-207ENST00000475549 CXCL5P42830 114 aa4.11□□□□□ -1.75
HDAC3-207ENST00000475549 PMVKQ15126 192 aa4.11□□□□□ -1.75
HDAC3-207ENST00000475549 KRTAP13-2Q52LG2 175 aa4.11□□□□□ -1.75
HDAC3-207ENST00000475549 UQCC3Q6UW78 93 aa4.11□□□□□ -1.75
HDAC3-207ENST00000475549 Q8NDZ9 215 aa4.11□□□□□ -1.75
HDAC3-207ENST00000475549 URB1-AS1Q96HZ7 61 aa4.11□□□□□ -1.75
HDAC3-207ENST00000475549 TRAV9-1A0A075B6T8 112 aa4.1□□□□□ -1.75
HDAC3-207ENST00000475549 IGLV5-39A0A0G2JS06 123 aa4.1□□□□□ -1.75
HDAC3-207ENST00000475549 RPL28P46779 137 aaKnown RBP4.1□□□□□ -1.75
HDAC3-207ENST00000475549 IGLC3P0DOY3 106 aa4.09□□□□□ -1.75
HDAC3-207ENST00000475549 CRYGAP11844 174 aa4.09□□□□□ -1.75
HDAC3-207ENST00000475549 C10orf91Q5T1B1 145 aa4.09□□□□□ -1.75
HDAC3-207ENST00000475549 SEC11CQ9BY50 192 aa4.09□□□□□ -1.75
HDAC3-207ENST00000475549 IGKV2-28A0A075B6P5 120 aa4.08□□□□□ -1.76
HDAC3-207ENST00000475549 TMEM238C9JI98 176 aa4.08□□□□□ -1.76
HDAC3-207ENST00000475549 IGKV2D-28P01615 120 aa4.08□□□□□ -1.76
HDAC3-207ENST00000475549 VPREB1P12018 145 aa4.08□□□□□ -1.76
HDAC3-207ENST00000475549 ZNF22P17026 224 aaPredicted RBP4.08□□□□□ -1.76
HDAC3-207ENST00000475549 PFN2P35080 140 aa4.08□□□□□ -1.76
HDAC3-207ENST00000475549 FABP9Q0Z7S8 132 aa4.08□□□□□ -1.76
HDAC3-207ENST00000475549 PMCHL1Q16048 86 aa4.08□□□□□ -1.76
HDAC3-207ENST00000475549 TYMSOSQ8TAI1 123 aa4.08□□□□□ -1.76
HDAC3-207ENST00000475549 SND1-IT1Q9HBX3 110 aa4.08□□□□□ -1.76
HDAC3-207ENST00000475549 LINC01549A6NIU2 74 aa4.07□□□□□ -1.76
HDAC3-207ENST00000475549 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.07□□□□□ -1.76
HDAC3-207ENST00000475549 ATP5LO75964 103 aa4.07□□□□□ -1.76
HDAC3-207ENST00000475549 LINC00614P0C842 121 aa4.07□□□□□ -1.76
HDAC3-207ENST00000475549 S100PP25815 95 aa4.07□□□□□ -1.76
HDAC3-207ENST00000475549 PRLHP81277 87 aa4.07□□□□□ -1.76
HDAC3-207ENST00000475549 FA2HQ7L5A8 372 aa4.07□□□□□ -1.76
HDAC3-207ENST00000475549 C18orf32Q8TCD1 76 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 188.3 ms