RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 HNRNPA3P51991 378 aaKnown RBP10.35□□□□□ -0.75
CPSF3-203ENST00000475482 RMI2Q96E14 147 aa10.35□□□□□ -0.75
CPSF3-203ENST00000475482 FAT1Q14517 4588 aa10.35□□□□□ -0.75
CPSF3-203ENST00000475482 IGHV3-64A0A075B6Q5 118 aa10.34□□□□□ -0.75
CPSF3-203ENST00000475482 MYMXA0A1B0GTQ4 84 aa10.34□□□□□ -0.75
CPSF3-203ENST00000475482 SMIM1B2RUZ4 78 aa10.34□□□□□ -0.75
CPSF3-203ENST00000475482 MALP21145 153 aa10.34□□□□□ -0.75
CPSF3-203ENST00000475482 XGP55808 180 aa10.34□□□□□ -0.75
CPSF3-203ENST00000475482 KRTAP10-1P60331 282 aa10.34□□□□□ -0.75
CPSF3-203ENST00000475482 PCP2Q8IVA1 136 aa10.34□□□□□ -0.75
CPSF3-203ENST00000475482 IGLV10-54A0A075B6I4 117 aa10.33□□□□□ -0.76
CPSF3-203ENST00000475482 IGLV5-39A0A0G2JS06 123 aa10.33□□□□□ -0.76
CPSF3-203ENST00000475482 ZNF815PA8K554 130 aa10.33□□□□□ -0.76
CPSF3-203ENST00000475482 APOMO95445 188 aa10.33□□□□□ -0.76
CPSF3-203ENST00000475482 C1orf43Q9BWL3 253 aa10.33□□□□□ -0.76
CPSF3-203ENST00000475482 PSCAO43653 123 aa10.32□□□□□ -0.76
CPSF3-203ENST00000475482 SFTA2Q6UW10 78 aa10.32□□□□□ -0.76
CPSF3-203ENST00000475482 C5orf38Q86SI9 138 aa10.32□□□□□ -0.76
CPSF3-203ENST00000475482 NTN5Q8WTR8 489 aaPredicted RBP10.32□□□□□ -0.76
CPSF3-203ENST00000475482 Q9HAA7 133 aa10.32□□□□□ -0.76
CPSF3-203ENST00000475482 GAGE12HA6NDE8 117 aa10.31□□□□□ -0.76
CPSF3-203ENST00000475482 FOXI1Q12951 378 aa10.31□□□□□ -0.76
CPSF3-203ENST00000475482 SCGB1D4Q6XE38 83 aa10.31□□□□□ -0.76
CPSF3-203ENST00000475482 COX11Q9Y6N1 276 aa10.31□□□□□ -0.76
CPSF3-203ENST00000475482 DNAH8Q96JB1 4490 aa10.31□□□□□ -0.76
CPSF3-203ENST00000475482 PRSS2P07478 247 aa10.3□□□□□ -0.76
CPSF3-203ENST00000475482 GCSHP23434 173 aa10.3□□□□□ -0.76
CPSF3-203ENST00000475482 Q8N814 137 aa10.3□□□□□ -0.76
CPSF3-203ENST00000475482 COX7B2Q8TF08 81 aa10.3□□□□□ -0.76
CPSF3-203ENST00000475482 TM2D2Q9BX73 214 aa10.3□□□□□ -0.76
CPSF3-203ENST00000475482 HIGD1BQ9P298 99 aa10.3□□□□□ -0.76
CPSF3-203ENST00000475482 NDUFA12Q9UI09 145 aa10.3□□□□□ -0.76
CPSF3-203ENST00000475482 IGKV2D-24A0A075B6R9 120 aa10.28□□□□□ -0.76
CPSF3-203ENST00000475482 TSPEAR-AS2P59090 65 aa10.28□□□□□ -0.76
CPSF3-203ENST00000475482 HERV-K104P63124 156 aa10.28□□□□□ -0.76
CPSF3-203ENST00000475482 WFDC2Q14508 124 aa10.28□□□□□ -0.76
CPSF3-203ENST00000475482 Q8IZM0 81 aa10.28□□□□□ -0.76
CPSF3-203ENST00000475482 TTTY13Q9BZ97 58 aa10.28□□□□□ -0.76
CPSF3-203ENST00000475482 NDUFA1O15239 70 aa10.27□□□□□ -0.77
CPSF3-203ENST00000475482 CXCL5P42830 114 aa10.27□□□□□ -0.77
CPSF3-203ENST00000475482 C6orf226Q5I0X4 101 aa10.27□□□□□ -0.77
CPSF3-203ENST00000475482 TOMM7Q9P0U1 55 aa10.27□□□□□ -0.77
CPSF3-203ENST00000475482 IGLV5-52A0A0A0MRZ9 124 aa10.26□□□□□ -0.77
CPSF3-203ENST00000475482 LINC00587B1AMM8 73 aa10.26□□□□□ -0.77
CPSF3-203ENST00000475482 CFAP161Q6P656 301 aa10.26□□□□□ -0.77
CPSF3-203ENST00000475482 ORAOV1Q8WV07 137 aa10.26□□□□□ -0.77
CPSF3-203ENST00000475482 CIRBPQ14011 172 aaKnown RBP10.25□□□□□ -0.77
CPSF3-203ENST00000475482 C2orf91Q6ZV80 131 aa10.25□□□□□ -0.77
CPSF3-203ENST00000475482 TMEM238C9JI98 176 aa10.24□□□□□ -0.77
CPSF3-203ENST00000475482 M0R143 59 aa10.24□□□□□ -0.77
CPSF3-203ENST00000475482 CKS1BP61024 79 aa10.24□□□□□ -0.77
CPSF3-203ENST00000475482 CTAG1AP78358 180 aa10.24□□□□□ -0.77
CPSF3-203ENST00000475482 TAL2Q16559 108 aa10.24□□□□□ -0.77
CPSF3-203ENST00000475482 HSD52Q0P140 79 aa10.23□□□□□ -0.77
CPSF3-203ENST00000475482 KRTAP26-1Q6PEX3 210 aa10.23□□□□□ -0.77
CPSF3-203ENST00000475482 TP73-AS1Q9UF72 201 aa10.23□□□□□ -0.77
CPSF3-203ENST00000475482 A0A0J9YXY3 114 aa10.22□□□□□ -0.77
CPSF3-203ENST00000475482 EPM2AB3EWF7 344 aa10.22□□□□□ -0.77
CPSF3-203ENST00000475482 TIMM17BO60830 172 aa10.22□□□□□ -0.77
CPSF3-203ENST00000475482 ZNF625Q96I27 306 aaPredicted RBP10.22□□□□□ -0.77
CPSF3-203ENST00000475482 SPANXB1Q9NS25 103 aaPredicted RBP10.22□□□□□ -0.77
CPSF3-203ENST00000475482 F8WDY8 70 aa10.21□□□□□ -0.77
CPSF3-203ENST00000475482 ZNF561-AS1K7EIQ3 104 aa10.21□□□□□ -0.77
CPSF3-203ENST00000475482 SPAG11BQ08648 103 aa10.21□□□□□ -0.77
CPSF3-203ENST00000475482 SRSF9Q13242 221 aaKnown RBP eCLIP10.21□□□□□ -0.77
CPSF3-203ENST00000475482 HIST1H4GQ99525 98 aa10.21□□□□□ -0.77
CPSF3-203ENST00000475482 MEIG1Q5JSS6 88 aa10.2□□□□□ -0.78
CPSF3-203ENST00000475482 Q6ZSA8 131 aa10.2□□□□□ -0.78
CPSF3-203ENST00000475482 Q6ZVH6 145 aa10.2□□□□□ -0.78
CPSF3-203ENST00000475482 COPS9Q8WXC6 57 aa10.2□□□□□ -0.78
CPSF3-203ENST00000475482 FAM30AQ9NZY2 134 aa10.2□□□□□ -0.78
CPSF3-203ENST00000475482 VPS13BQ7Z7G8 4022 aa10.19□□□□□ -0.78
CPSF3-203ENST00000475482 LECT2O14960 151 aa10.19□□□□□ -0.78
CPSF3-203ENST00000475482 KIAA0087Q14695 138 aa10.18□□□□□ -0.78
CPSF3-203ENST00000475482 Q5VSD8 79 aa10.17□□□□□ -0.78
CPSF3-203ENST00000475482 C2orf48Q96LS8 159 aa10.17□□□□□ -0.78
CPSF3-203ENST00000475482 GVQW2A0A096LPI5 108 aaPredicted RBP10.16□□□□□ -0.78
CPSF3-203ENST00000475482 HINT1P49773 126 aaPredicted RBP10.16□□□□□ -0.78
CPSF3-203ENST00000475482 COX17Q14061 63 aa10.16□□□□□ -0.78
CPSF3-203ENST00000475482 SPANXDQ9BXN6 97 aa10.16□□□□□ -0.78
CPSF3-203ENST00000475482 SPANXCQ9NY87 97 aa10.16□□□□□ -0.78
CPSF3-203ENST00000475482 SRRM2Q9UQ35 2752 aaKnown RBP10.16□□□□□ -0.78
CPSF3-203ENST00000475482 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.15□□□□□ -0.78
CPSF3-203ENST00000475482 TMEM238LA0A1B0GVL6 79 aa10.15□□□□□ -0.78
CPSF3-203ENST00000475482 A6NJY4 79 aa10.15□□□□□ -0.78
CPSF3-203ENST00000475482 SMR3BP02814 79 aaPredicted RBP10.15□□□□□ -0.78
CPSF3-203ENST00000475482 IFITM1P13164 125 aa10.15□□□□□ -0.78
CPSF3-203ENST00000475482 HAMPP81172 84 aa10.15□□□□□ -0.78
CPSF3-203ENST00000475482 CEND1Q8N111 149 aa10.15□□□□□ -0.78
CPSF3-203ENST00000475482 FLG2Q5D862 2391 aaPredicted RBP10.14□□□□□ -0.79
CPSF3-203ENST00000475482 PTTG1IPP53801 180 aa10.14□□□□□ -0.79
CPSF3-203ENST00000475482 C14orf177Q52M58 125 aa10.14□□□□□ -0.79
CPSF3-203ENST00000475482 BVES-AS1Q5T3Y7 98 aa10.14□□□□□ -0.79
CPSF3-203ENST00000475482 C15orf56Q8N910 161 aa10.14□□□□□ -0.79
CPSF3-203ENST00000475482 CAMK2N2Q96S95 79 aa10.14□□□□□ -0.79
CPSF3-203ENST00000475482 ERG28Q9UKR5 140 aa10.14□□□□□ -0.79
CPSF3-203ENST00000475482 TRBV30A0A0K0K1B3 111 aa10.13□□□□□ -0.79
CPSF3-203ENST00000475482 A6NDN8 102 aa10.13□□□□□ -0.79
CPSF3-203ENST00000475482 USP17L23D6RBM5 183 aa10.13□□□□□ -0.79
CPSF3-203ENST00000475482 LINC00158P58513 81 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms