RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 NUP188Q5SRE5 1749 aa-0.46□□□□□ -2.48
LTN1-204ENST00000475344 S100A1P23297 94 aa-0.46□□□□□ -2.48
LTN1-204ENST00000475344 FXYD6Q9H0Q3 95 aa-0.46□□□□□ -2.48
LTN1-204ENST00000475344 STARD9Q9P2P6 4700 aa-0.46□□□□□ -2.48
LTN1-204ENST00000475344 NF1P21359 2839 aa-0.46□□□□□ -2.48
LTN1-204ENST00000475344 FMN2Q9NZ56 1722 aa-0.47□□□□□ -2.48
LTN1-204ENST00000475344 ADGRL2O95490 1459 aa-0.47□□□□□ -2.48
LTN1-204ENST00000475344 FAM223BA6NKX1 122 aa-0.47□□□□□ -2.48
LTN1-204ENST00000475344 LINC00587B1AMM8 73 aa-0.47□□□□□ -2.48
LTN1-204ENST00000475344 LOC730098B7Z3J9 87 aa-0.47□□□□□ -2.48
LTN1-204ENST00000475344 TRAPPC2P0DI81 140 aa-0.47□□□□□ -2.48
LTN1-204ENST00000475344 TRAPPC2BP0DI82 140 aa-0.47□□□□□ -2.48
LTN1-204ENST00000475344 KLK9Q2XQG4 91 aa-0.47□□□□□ -2.48
LTN1-204ENST00000475344 PRO1854Q9UHT4 67 aa-0.47□□□□□ -2.48
LTN1-204ENST00000475344 TOP2BQ02880 1626 aa-0.47□□□□□ -2.48
LTN1-204ENST00000475344 C1orf167Q5SNV9 1468 aa-0.48□□□□□ -2.49
LTN1-204ENST00000475344 PKHD1P08F94 4074 aa-0.48□□□□□ -2.49
LTN1-204ENST00000475344 NRKQ7Z2Y5 1582 aa-0.48□□□□□ -2.49
LTN1-204ENST00000475344 SVEP1Q4LDE5 3571 aa-0.48□□□□□ -2.49
LTN1-204ENST00000475344 CC2D2AQ9P2K1 1620 aa-0.48□□□□□ -2.49
LTN1-204ENST00000475344 FLGP20930 4061 aaPredicted RBP-0.48□□□□□ -2.49
LTN1-204ENST00000475344 COX6CP09669 75 aa-0.48□□□□□ -2.49
LTN1-204ENST00000475344 C2orf88Q9BSF0 95 aa-0.48□□□□□ -2.49
LTN1-204ENST00000475344 GNG8Q9UK08 70 aa-0.48□□□□□ -2.49
LTN1-204ENST00000475344 SPHKAPQ2M3C7 1700 aa-0.48□□□□□ -2.49
LTN1-204ENST00000475344 PZPP20742 1482 aa-0.48□□□□□ -2.49
LTN1-204ENST00000475344 CHD1O14646 1710 aa-0.49□□□□□ -2.49
LTN1-204ENST00000475344 LAMA5O15230 3695 aa-0.49□□□□□ -2.49
LTN1-204ENST00000475344 A0A1B0GWA3 101 aa-0.49□□□□□ -2.49
LTN1-204ENST00000475344 NAP1L6A6NFF2 107 aa-0.49□□□□□ -2.49
LTN1-204ENST00000475344 SPRR2BP35325 72 aa-0.49□□□□□ -2.49
LTN1-204ENST00000475344 SNCAP37840 140 aa-0.49□□□□□ -2.49
LTN1-204ENST00000475344 KRTAP19-8Q3LI54 63 aa-0.49□□□□□ -2.49
LTN1-204ENST00000475344 DIP2CQ9Y2E4 1556 aa-0.49□□□□□ -2.49
LTN1-204ENST00000475344 KIAA0556O60303 1618 aa-0.49□□□□□ -2.49
LTN1-204ENST00000475344 COL4A6Q14031 1691 aa-0.49□□□□□ -2.49
LTN1-204ENST00000475344 XRN1Q8IZH2 1706 aaKnown RBP-0.5□□□□□ -2.49
LTN1-204ENST00000475344 ABCA3Q99758 1704 aa-0.5□□□□□ -2.49
LTN1-204ENST00000475344 DOPEY1Q5JWR5 2465 aa-0.5□□□□□ -2.49
LTN1-204ENST00000475344 RYR2Q92736 4967 aa-0.5□□□□□ -2.49
LTN1-204ENST00000475344 SPINK4O60575 86 aa-0.5□□□□□ -2.49
LTN1-204ENST00000475344 DEFB105AQ8NG35 78 aa-0.5□□□□□ -2.49
LTN1-204ENST00000475344 C12orf57Q99622 126 aa-0.5□□□□□ -2.49
LTN1-204ENST00000475344 PRO1933Q9H354 126 aa-0.5□□□□□ -2.49
LTN1-204ENST00000475344 ARHGAP5Q13017 1502 aa-0.5□□□□□ -2.49
LTN1-204ENST00000475344 EIF4G3O43432 1585 aaKnown RBP-0.5□□□□□ -2.49
LTN1-204ENST00000475344 MARF1Q9Y4F3 1742 aaKnown RBP-0.5□□□□□ -2.49
LTN1-204ENST00000475344 CRYM-AS1A6NIL9 109 aa-0.51□□□□□ -2.49
LTN1-204ENST00000475344 SARNPP82979 210 aaKnown RBP-0.51□□□□□ -2.49
LTN1-204ENST00000475344 LAMA2P24043 3122 aaKnown RBP-0.51□□□□□ -2.49
LTN1-204ENST00000475344 PAPPA2Q9BXP8 1791 aa-0.52□□□□□ -2.49
LTN1-204ENST00000475344 SETBP1Q9Y6X0 1596 aa-0.52□□□□□ -2.49
LTN1-204ENST00000475344 NLRP1Q9C000 1473 aa-0.52□□□□□ -2.49
LTN1-204ENST00000475344 TMEM203Q969S6 136 aa-0.52□□□□□ -2.49
LTN1-204ENST00000475344 A0A0G2JMZ2 1700 aa-0.52□□□□□ -2.49
LTN1-204ENST00000475344 PCNX1Q96RV3 2341 aa-0.53□□□□□ -2.49
LTN1-204ENST00000475344 MAPKBP1O60336 1514 aa-0.53□□□□□ -2.49
LTN1-204ENST00000475344 MRC2Q9UBG0 1479 aa-0.53□□□□□ -2.49
LTN1-204ENST00000475344 hADV29S1A0JD25 119 aa-0.53□□□□□ -2.49
LTN1-204ENST00000475344 H3BQ15 152 aa-0.53□□□□□ -2.49
LTN1-204ENST00000475344 SYS1-DBNDD2H3BUS1 97 aa-0.53□□□□□ -2.49
LTN1-204ENST00000475344 SAA2P0DJI9 122 aaPredicted RBP-0.53□□□□□ -2.49
LTN1-204ENST00000475344 LINC00846Q9NV44 126 aa-0.53□□□□□ -2.49
LTN1-204ENST00000475344 KNL1Q8NG31 2342 aa-0.53□□□□□ -2.49
LTN1-204ENST00000475344 PRRC2CQ9Y520 2896 aaKnown RBP-0.53□□□□□ -2.49
LTN1-204ENST00000475344 HIVEP1P15822 2718 aa-0.53□□□□□ -2.49
LTN1-204ENST00000475344 PLEKHH2Q8IVE3 1493 aa-0.54□□□□□ -2.5
LTN1-204ENST00000475344 ABCA13Q86UQ4 5058 aa-0.54□□□□□ -2.5
LTN1-204ENST00000475344 A0A087WVE0 104 aa-0.54□□□□□ -2.5
LTN1-204ENST00000475344 SEC11AP67812 179 aa-0.54□□□□□ -2.5
LTN1-204ENST00000475344 APLNQ9ULZ1 77 aa-0.54□□□□□ -2.5
LTN1-204ENST00000475344 TOPAZ1Q8N9V7 1692 aa-0.54□□□□□ -2.5
LTN1-204ENST00000475344 SONP18583 2426 aaKnown RBP-0.54□□□□□ -2.5
LTN1-204ENST00000475344 TRANK1O15050 2925 aa-0.54□□□□□ -2.5
LTN1-204ENST00000475344 FAT3Q8TDW7 4589 aa-0.55□□□□□ -2.5
LTN1-204ENST00000475344 BIRC6Q9NR09 4857 aa-0.55□□□□□ -2.5
LTN1-204ENST00000475344 NBPF19A0A087WUL8 3843 aa-0.55□□□□□ -2.5
LTN1-204ENST00000475344 COX8AP10176 69 aa-0.55□□□□□ -2.5
LTN1-204ENST00000475344 MRPS10P82664 201 aaKnown RBP-0.55□□□□□ -2.5
LTN1-204ENST00000475344 GTF2H5Q6ZYL4 71 aa-0.55□□□□□ -2.5
LTN1-204ENST00000475344 USMG5Q96IX5 58 aa-0.55□□□□□ -2.5
LTN1-204ENST00000475344 CRIPTQ9P021 101 aa-0.55□□□□□ -2.5
LTN1-204ENST00000475344 NBASA2RRP1 2371 aa-0.55□□□□□ -2.5
LTN1-204ENST00000475344 SETD2Q9BYW2 2564 aaPredicted RBP-0.55□□□□□ -2.5
LTN1-204ENST00000475344 TEP1Q99973 2627 aaKnown RBP-0.56□□□□□ -2.5
LTN1-204ENST00000475344 M0R2T5 61 aa-0.56□□□□□ -2.5
LTN1-204ENST00000475344 KRTDAPP60985 99 aa-0.56□□□□□ -2.5
LTN1-204ENST00000475344 HSD52Q0P140 79 aa-0.56□□□□□ -2.5
LTN1-204ENST00000475344 KNDC1Q76NI1 1749 aa-0.56□□□□□ -2.5
LTN1-204ENST00000475344 CREBBPQ92793 2442 aa-0.56□□□□□ -2.5
LTN1-204ENST00000475344 ABCC5O15440 1437 aa-0.56□□□□□ -2.5
LTN1-204ENST00000475344 C7orf77A4D0Y5 90 aa-0.57□□□□□ -2.5
LTN1-204ENST00000475344 CPSF4LA6NMK7 179 aaKnown RBP-0.57□□□□□ -2.5
LTN1-204ENST00000475344 TMEM262E9PQX1 116 aa-0.57□□□□□ -2.5
LTN1-204ENST00000475344 CGREF1Q99674 301 aa-0.57□□□□□ -2.5
LTN1-204ENST00000475344 MXRA5Q9NR99 2828 aa-0.58□□□□□ -2.5
LTN1-204ENST00000475344 IQSEC2Q5JU85 1478 aa-0.58□□□□□ -2.5
LTN1-204ENST00000475344 A0A1B0GU69 56 aa-0.58□□□□□ -2.5
LTN1-204ENST00000475344 ASIPP42127 132 aa-0.58□□□□□ -2.5
LTN1-204ENST00000475344 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms