RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 LINC00469Q8N7U9 141 aa7.36□□□□□ -1.23
SKA3-206ENST00000475251 TOMM7Q9P0U1 55 aa7.36□□□□□ -1.23
SKA3-206ENST00000475251 IGLV4-3A0A075B6K6 122 aa7.35□□□□□ -1.23
SKA3-206ENST00000475251 NPYP01303 97 aa7.35□□□□□ -1.23
SKA3-206ENST00000475251 Q8IZM0 81 aa7.35□□□□□ -1.23
SKA3-206ENST00000475251 LINC00304Q8N9R0 145 aa7.35□□□□□ -1.23
SKA3-206ENST00000475251 RETNLBQ9BQ08 111 aa7.35□□□□□ -1.23
SKA3-206ENST00000475251 XAGE1AQ9HD64 81 aa7.35□□□□□ -1.23
SKA3-206ENST00000475251 IGLV7-46A0A075B6I9 117 aa7.34□□□□□ -1.23
SKA3-206ENST00000475251 SMIM27A0A1W2PRY6 76 aa7.34□□□□□ -1.23
SKA3-206ENST00000475251 FAM229BQ4G0N7 80 aa7.34□□□□□ -1.23
SKA3-206ENST00000475251 ALKAL2Q6UX46 152 aa7.34□□□□□ -1.23
SKA3-206ENST00000475251 LINC00173Q6ZV60 143 aa7.34□□□□□ -1.23
SKA3-206ENST00000475251 ORMDL3Q8N138 153 aa7.33□□□□□ -1.24
SKA3-206ENST00000475251 ALKBH7Q9BT30 221 aaPredicted RBP7.33□□□□□ -1.24
SKA3-206ENST00000475251 F8VRH5 84 aa7.32□□□□□ -1.24
SKA3-206ENST00000475251 SRP19P09132 144 aaKnown RBP7.32□□□□□ -1.24
SKA3-206ENST00000475251 UBE2AP49459 152 aa7.32□□□□□ -1.24
SKA3-206ENST00000475251 MUC17Q685J3 4493 aa7.32□□□□□ -1.24
SKA3-206ENST00000475251 IGKV2D-26A0A0A0MRZ7 120 aa7.31□□□□□ -1.24
SKA3-206ENST00000475251 CXCL5P42830 114 aa7.31□□□□□ -1.24
SKA3-206ENST00000475251 RPL23P62829 140 aaKnown RBP7.31□□□□□ -1.24
SKA3-206ENST00000475251 SEC11AP67812 179 aa7.31□□□□□ -1.24
SKA3-206ENST00000475251 ADIRFQ15847 76 aa7.31□□□□□ -1.24
SKA3-206ENST00000475251 KRTAP13-2Q52LG2 175 aa7.31□□□□□ -1.24
SKA3-206ENST00000475251 VCX2Q9H322 139 aa7.31□□□□□ -1.24
SKA3-206ENST00000475251 NPSP0C0P6 89 aa7.3□□□□□ -1.24
SKA3-206ENST00000475251 HERVK_113P63121 156 aa7.3□□□□□ -1.24
SKA3-206ENST00000475251 MRPL54Q6P161 138 aaKnown RBP7.3□□□□□ -1.24
SKA3-206ENST00000475251 TMEM136Q6ZRR5 245 aa7.3□□□□□ -1.24
SKA3-206ENST00000475251 LINC00167Q96N53 147 aa7.3□□□□□ -1.24
SKA3-206ENST00000475251 ANAPC11Q9NYG5 84 aa7.3□□□□□ -1.24
SKA3-206ENST00000475251 NAT8Q9UHE5 227 aa7.3□□□□□ -1.24
SKA3-206ENST00000475251 CYSLTR1Q9Y271 337 aa7.3□□□□□ -1.24
SKA3-206ENST00000475251 RPL37AP8A6NKH3 93 aa7.29□□□□□ -1.24
SKA3-206ENST00000475251 H3BS24 57 aa7.29□□□□□ -1.24
SKA3-206ENST00000475251 PAPPA-AS1Q5QFB9 102 aa7.29□□□□□ -1.24
SKA3-206ENST00000475251 FAM19A3Q7Z5A8 133 aa7.29□□□□□ -1.24
SKA3-206ENST00000475251 PRELID3AQ96N28 172 aa7.29□□□□□ -1.24
SKA3-206ENST00000475251 AMELXQ99217 191 aa7.29□□□□□ -1.24
SKA3-206ENST00000475251 LAMTOR2Q9Y2Q5 125 aa7.29□□□□□ -1.24
SKA3-206ENST00000475251 A0A1B0GXF2 115 aa7.28□□□□□ -1.24
SKA3-206ENST00000475251 PRSS47A8MTI9 375 aa7.28□□□□□ -1.24
SKA3-206ENST00000475251 C2orf66Q6UXQ4 117 aa7.28□□□□□ -1.24
SKA3-206ENST00000475251 PPDPFQ9H3Y8 114 aa7.28□□□□□ -1.24
SKA3-206ENST00000475251 MAP1LC3AQ9H492 121 aa7.28□□□□□ -1.24
SKA3-206ENST00000475251 LINC01547P58512 204 aaPredicted RBP7.27□□□□□ -1.25
SKA3-206ENST00000475251 ATP5L2Q7Z4Y8 100 aa7.27□□□□□ -1.25
SKA3-206ENST00000475251 KRTAP13-1Q8IUC0 172 aa7.27□□□□□ -1.25
SKA3-206ENST00000475251 NKAPP1Q8N9T2 125 aa7.27□□□□□ -1.25
SKA3-206ENST00000475251 GEMIN7Q9H840 131 aaKnown RBP7.27□□□□□ -1.25
SKA3-206ENST00000475251 GAGE10A6NGK3 116 aa7.26□□□□□ -1.25
SKA3-206ENST00000475251 K7EMI3 77 aa7.26□□□□□ -1.25
SKA3-206ENST00000475251 PNRC1Q12796 327 aaPredicted RBP7.26□□□□□ -1.25
SKA3-206ENST00000475251 ORMDL2Q53FV1 153 aa7.26□□□□□ -1.25
SKA3-206ENST00000475251 IGLV5-37A0A075B6J1 123 aa7.25□□□□□ -1.25
SKA3-206ENST00000475251 LOC389332A0A1B0GUA5 103 aa7.25□□□□□ -1.25
SKA3-206ENST00000475251 G0S2P27469 103 aa7.25□□□□□ -1.25
SKA3-206ENST00000475251 ZC2HC1BQ5TFG8 222 aa7.25□□□□□ -1.25
SKA3-206ENST00000475251 SPAG11AQ6PDA7 123 aa7.25□□□□□ -1.25
SKA3-206ENST00000475251 Q8N8P6 123 aa7.25□□□□□ -1.25
SKA3-206ENST00000475251 CDKN2A-AS1Q9UH64 79 aa7.25□□□□□ -1.25
SKA3-206ENST00000475251 FP248Q71RG6 208 aaPredicted RBP7.24□□□□□ -1.25
SKA3-206ENST00000475251 LINC00337Q8N6G1 96 aa7.24□□□□□ -1.25
SKA3-206ENST00000475251 IGIPA6NJ69 53 aa7.23□□□□□ -1.25
SKA3-206ENST00000475251 PDZD11Q5EBL8 140 aa7.22□□□□□ -1.25
SKA3-206ENST00000475251 FSIP2Q5CZC0 6907 aa7.21□□□□□ -1.25
SKA3-206ENST00000475251 IGKV2-28A0A075B6P5 120 aa7.21□□□□□ -1.26
SKA3-206ENST00000475251 IGKV2D-28P01615 120 aa7.21□□□□□ -1.26
SKA3-206ENST00000475251 PRLHP81277 87 aa7.21□□□□□ -1.26
SKA3-206ENST00000475251 PEA15Q15121 130 aa7.21□□□□□ -1.26
SKA3-206ENST00000475251 FAM19A1Q7Z5A9 133 aa7.21□□□□□ -1.26
SKA3-206ENST00000475251 AKAP14Q86UN6 197 aa7.21□□□□□ -1.26
SKA3-206ENST00000475251 COX7B2Q8TF08 81 aa7.21□□□□□ -1.26
SKA3-206ENST00000475251 TIMM17AQ99595 171 aa7.21□□□□□ -1.26
SKA3-206ENST00000475251 SMIM1B2RUZ4 78 aa7.2□□□□□ -1.26
SKA3-206ENST00000475251 ASB16-AS1Q495Z4 193 aa7.2□□□□□ -1.26
SKA3-206ENST00000475251 GNB1LQ9BYB4 327 aa7.2□□□□□ -1.26
SKA3-206ENST00000475251 NXT2Q9NPJ8 142 aaKnown RBP7.2□□□□□ -1.26
SKA3-206ENST00000475251 CRCT1Q9UGL9 99 aa7.2□□□□□ -1.26
SKA3-206ENST00000475251 RAB5BP61020 215 aa7.19□□□□□ -1.26
SKA3-206ENST00000475251 LCE1DQ5T752 114 aa7.19□□□□□ -1.26
SKA3-206ENST00000475251 TMEM126AQ9H061 195 aa7.19□□□□□ -1.26
SKA3-206ENST00000475251 TINCRA0A1B0GVN0 87 aa7.18□□□□□ -1.26
SKA3-206ENST00000475251 ATP5LO75964 103 aa7.18□□□□□ -1.26
SKA3-206ENST00000475251 SEC61BP60468 96 aaKnown RBP7.18□□□□□ -1.26
SKA3-206ENST00000475251 LCE4AQ5TA78 99 aa7.18□□□□□ -1.26
SKA3-206ENST00000475251 C9JQL5 133 aa7.17□□□□□ -1.26
SKA3-206ENST00000475251 CBLN2Q8IUK8 224 aa7.17□□□□□ -1.26
SKA3-206ENST00000475251 C3orf22Q8N5N4 141 aa7.17□□□□□ -1.26
SKA3-206ENST00000475251 PLEKHB2Q96CS7 222 aa7.17□□□□□ -1.26
SKA3-206ENST00000475251 IGLV5-45A0A087WSX0 123 aa7.16□□□□□ -1.26
SKA3-206ENST00000475251 RPL24P83731 157 aaKnown RBP7.16□□□□□ -1.26
SKA3-206ENST00000475251 KRTAP13-3Q3SY46 172 aa7.16□□□□□ -1.26
SKA3-206ENST00000475251 ERASQ7Z444 233 aa7.16□□□□□ -1.26
SKA3-206ENST00000475251 TOMM6Q96B49 74 aa7.16□□□□□ -1.26
SKA3-206ENST00000475251 LINC01549A6NIU2 74 aa7.15□□□□□ -1.26
SKA3-206ENST00000475251 SCGB3A1Q96QR1 104 aa7.15□□□□□ -1.26
SKA3-206ENST00000475251 ZNF706Q9Y5V0 76 aaPredicted RBP7.15□□□□□ -1.26
SKA3-206ENST00000475251 TMEM238C9JI98 176 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms