RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 TAX1BP3O14907 124 aa3.74□□□□□ -1.81
CPSF7-210ENST00000474684 UBE2L6O14933 153 aa3.74□□□□□ -1.81
CPSF7-210ENST00000474684 NCR2O95944 276 aa3.74□□□□□ -1.81
CPSF7-210ENST00000474684 FGF6P10767 208 aa3.74□□□□□ -1.81
CPSF7-210ENST00000474684 RPL24P83731 157 aaKnown RBP3.74□□□□□ -1.81
CPSF7-210ENST00000474684 HSD52Q0P140 79 aa3.74□□□□□ -1.81
CPSF7-210ENST00000474684 CT83Q5H943 113 aa3.74□□□□□ -1.81
CPSF7-210ENST00000474684 PRSS3P2Q8NHM4 247 aa3.74□□□□□ -1.81
CPSF7-210ENST00000474684 CHCHD10Q8WYQ3 142 aaPredicted RBP3.74□□□□□ -1.81
CPSF7-210ENST00000474684 LINC00526Q96FQ7 95 aa3.74□□□□□ -1.81
CPSF7-210ENST00000474684 RNF185Q96GF1 192 aa3.74□□□□□ -1.81
CPSF7-210ENST00000474684 MAP1LC3CQ9BXW4 147 aa3.74□□□□□ -1.81
CPSF7-210ENST00000474684 SPANXCQ9NY87 97 aa3.74□□□□□ -1.81
CPSF7-210ENST00000474684 IGHV3-64A0A075B6Q5 118 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 A0A096LNI7 61 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 GVQW2A0A096LPI5 108 aaPredicted RBP3.73□□□□□ -1.81
CPSF7-210ENST00000474684 IGKV2-24A0A0C4DH68 120 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 C9orf118A6NHY6 69 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 F8W1H4 67 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 SMKR1H3BMG3 65 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 OXTP01178 125 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 TSHBP01222 138 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 FABP2P12104 132 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 COX6A2Q02221 97 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 FOXI1Q12951 378 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 LYRM7Q5U5X0 104 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 RNASEKQ6P5S7 137 aaKnown RBP3.73□□□□□ -1.81
CPSF7-210ENST00000474684 TMEM136Q6ZRR5 245 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 ERASQ7Z444 233 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 C18orf32Q8TCD1 76 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 TSKUQ8WUA8 353 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 MRAP2Q96G30 205 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 V9GYV3 84 aa3.73□□□□□ -1.81
CPSF7-210ENST00000474684 TRBV6-5A0A0K0K1A5 114 aa3.72□□□□□ -1.81
CPSF7-210ENST00000474684 HIGD1CA8MV81 97 aa3.72□□□□□ -1.81
CPSF7-210ENST00000474684 LEPROTL1O95214 131 aa3.72□□□□□ -1.81
CPSF7-210ENST00000474684 COX8AP10176 69 aa3.72□□□□□ -1.81
CPSF7-210ENST00000474684 XCL1P47992 114 aa3.72□□□□□ -1.81
CPSF7-210ENST00000474684 RNASE13Q5GAN3 156 aaKnown RBP3.72□□□□□ -1.81
CPSF7-210ENST00000474684 AMMECR1LQ6DCA0 310 aa3.72□□□□□ -1.81
CPSF7-210ENST00000474684 AMN1Q8IY45 258 aa3.72□□□□□ -1.81
CPSF7-210ENST00000474684 AP5S1Q9NUS5 200 aa3.72□□□□□ -1.81
CPSF7-210ENST00000474684 PLA2G2DQ9UNK4 145 aa3.72□□□□□ -1.81
CPSF7-210ENST00000474684 RNF213Q63HN8 5207 aa3.72□□□□□ -1.81
CPSF7-210ENST00000474684 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.71□□□□□ -1.82
CPSF7-210ENST00000474684 A8MWL6 223 aa3.71□□□□□ -1.82
CPSF7-210ENST00000474684 SYS1-DBNDD2H3BUS1 97 aa3.71□□□□□ -1.82
CPSF7-210ENST00000474684 NUPR1O60356 82 aa3.71□□□□□ -1.82
CPSF7-210ENST00000474684 PRR3P79522 188 aaKnown RBP3.71□□□□□ -1.82
CPSF7-210ENST00000474684 KRTAP3-1Q9BYR8 98 aa3.71□□□□□ -1.82
CPSF7-210ENST00000474684 PLAC8Q9NZF1 115 aa3.71□□□□□ -1.82
CPSF7-210ENST00000474684 HIGD1BQ9P298 99 aa3.71□□□□□ -1.82
CPSF7-210ENST00000474684 LINC00959A0A1B0GUT2 108 aa3.7□□□□□ -1.82
CPSF7-210ENST00000474684 A0A1B0GUT8 65 aa3.7□□□□□ -1.82
CPSF7-210ENST00000474684 A0A1W2PPM0 123 aa3.7□□□□□ -1.82
CPSF7-210ENST00000474684 I3L3M4 83 aa3.7□□□□□ -1.82
CPSF7-210ENST00000474684 POLR2KP53803 58 aaKnown RBP3.7□□□□□ -1.82
CPSF7-210ENST00000474684 HBBP68871 147 aa3.7□□□□□ -1.82
CPSF7-210ENST00000474684 TAL2Q16559 108 aa3.7□□□□□ -1.82
CPSF7-210ENST00000474684 LINC01545Q5VT33 79 aa3.7□□□□□ -1.82
CPSF7-210ENST00000474684 Q6ZUT4 128 aa3.7□□□□□ -1.82
CPSF7-210ENST00000474684 NRACQ8N912 160 aa3.7□□□□□ -1.82
CPSF7-210ENST00000474684 NUP35Q8NFH5 326 aa3.7□□□□□ -1.82
CPSF7-210ENST00000474684 CARD19Q96LW7 228 aa3.7□□□□□ -1.82
CPSF7-210ENST00000474684 SPCS1Q9Y6A9 102 aa3.7□□□□□ -1.82
CPSF7-210ENST00000474684 TRBV27A0A0K0K1C4 114 aa3.69□□□□□ -1.82
CPSF7-210ENST00000474684 H7C423 109 aa3.69□□□□□ -1.82
CPSF7-210ENST00000474684 CKS1BP61024 79 aa3.69□□□□□ -1.82
CPSF7-210ENST00000474684 SERTAD4-AS1Q5TG53 156 aa3.69□□□□□ -1.82
CPSF7-210ENST00000474684 CDC42SE2Q9NRR3 84 aa3.69□□□□□ -1.82
CPSF7-210ENST00000474684 CYSLTR1Q9Y271 337 aa3.69□□□□□ -1.82
CPSF7-210ENST00000474684 LPAP08519 4548 aa3.69□□□□□ -1.82
CPSF7-210ENST00000474684 IGHV1-58A0A0C4DH39 117 aa3.68□□□□□ -1.82
CPSF7-210ENST00000474684 SMIM13P0DJ93 91 aa3.68□□□□□ -1.82
CPSF7-210ENST00000474684 MRPL51Q4U2R6 128 aaKnown RBP3.68□□□□□ -1.82
CPSF7-210ENST00000474684 Q6ZRU5 148 aa3.68□□□□□ -1.82
CPSF7-210ENST00000474684 FAM104AQ969W3 186 aa3.68□□□□□ -1.82
CPSF7-210ENST00000474684 UBE2D4Q9Y2X8 147 aa3.68□□□□□ -1.82
CPSF7-210ENST00000474684 IGLV4-69A0A075B6H9 119 aa3.67□□□□□ -1.82
CPSF7-210ENST00000474684 A0A1B0GXF2 115 aa3.67□□□□□ -1.82
CPSF7-210ENST00000474684 TSPAN13O95857 204 aa3.67□□□□□ -1.82
CPSF7-210ENST00000474684 CAMPP49913 170 aa3.67□□□□□ -1.82
CPSF7-210ENST00000474684 SUMO2P61956 95 aaKnown RBP3.67□□□□□ -1.82
CPSF7-210ENST00000474684 RPL39P62891 51 aaKnown RBP3.67□□□□□ -1.82
CPSF7-210ENST00000474684 CD164L2Q6UWJ8 174 aa3.67□□□□□ -1.82
CPSF7-210ENST00000474684 C7orf33Q8WU49 177 aa3.67□□□□□ -1.82
CPSF7-210ENST00000474684 DPH3Q96FX2 82 aa3.67□□□□□ -1.82
CPSF7-210ENST00000474684 TMEM101Q96IK0 257 aa3.67□□□□□ -1.82
CPSF7-210ENST00000474684 TRAV13-1A0A0B4J241 112 aa3.66□□□□□ -1.82
CPSF7-210ENST00000474684 A0A0J9YXV3 536 aa3.66□□□□□ -1.82
CPSF7-210ENST00000474684 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.66□□□□□ -1.82
CPSF7-210ENST00000474684 H3BUT2 72 aa3.66□□□□□ -1.82
CPSF7-210ENST00000474684 M0QXV9 152 aa3.66□□□□□ -1.82
CPSF7-210ENST00000474684 NPYP01303 97 aa3.66□□□□□ -1.82
CPSF7-210ENST00000474684 FCER1GP30273 86 aa3.66□□□□□ -1.82
CPSF7-210ENST00000474684 SYCNQ0VAF6 134 aa3.66□□□□□ -1.82
CPSF7-210ENST00000474684 RIGQ13278 110 aa3.66□□□□□ -1.82
CPSF7-210ENST00000474684 SS18Q15532 418 aa3.66□□□□□ -1.82
CPSF7-210ENST00000474684 FAM104BQ5XKR9 115 aa3.66□□□□□ -1.82
CPSF7-210ENST00000474684 C5orf38Q86SI9 138 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms