RNA–Protein interactions for RNA: ENST00000474326.1

PFDN4-203, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 191 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-203ENST00000474326 GAGE2DQ9UEU5 116 aa10.47□□□□□ -0.73
PFDN4-203ENST00000474326 HBDP02042 147 aa10.46□□□□□ -0.73
PFDN4-203ENST00000474326 CXCL5P42830 114 aa10.46□□□□□ -0.73
PFDN4-203ENST00000474326 HNRNPA3P51991 378 aaKnown RBP10.46□□□□□ -0.73
PFDN4-203ENST00000474326 NDUFA6P56556 154 aa10.46□□□□□ -0.73
PFDN4-203ENST00000474326 CST9LQ9H4G1 147 aa10.46□□□□□ -0.73
PFDN4-203ENST00000474326 NDUFC2-KCTD14E9PQ53 114 aa10.45□□□□□ -0.74
PFDN4-203ENST00000474326 H3BRM9 83 aa10.45□□□□□ -0.74
PFDN4-203ENST00000474326 A0A1W2PNN7 141 aa10.44□□□□□ -0.74
PFDN4-203ENST00000474326 F8VRH5 84 aa10.43□□□□□ -0.74
PFDN4-203ENST00000474326 PDZD11Q5EBL8 140 aa10.43□□□□□ -0.74
PFDN4-203ENST00000474326 FAM19A5Q7Z5A7 132 aaPredicted RBP10.43□□□□□ -0.74
PFDN4-203ENST00000474326 ATP5LO75964 103 aa10.42□□□□□ -0.74
PFDN4-203ENST00000474326 SMIM1B2RUZ4 78 aa10.41□□□□□ -0.74
PFDN4-203ENST00000474326 COX7B2Q8TF08 81 aa10.41□□□□□ -0.74
PFDN4-203ENST00000474326 IGLV5-45A0A087WSX0 123 aa10.4□□□□□ -0.74
PFDN4-203ENST00000474326 SPINK6Q6UWN8 80 aa10.4□□□□□ -0.74
PFDN4-203ENST00000474326 PHF5AQ7RTV0 110 aaKnown RBP10.4□□□□□ -0.74
PFDN4-203ENST00000474326 SPINK8P0C7L1 97 aa10.39□□□□□ -0.75
PFDN4-203ENST00000474326 UBE2BP63146 152 aa10.39□□□□□ -0.75
PFDN4-203ENST00000474326 PMCHL1Q16048 86 aa10.39□□□□□ -0.75
PFDN4-203ENST00000474326 REG3GQ6UW15 175 aa10.39□□□□□ -0.75
PFDN4-203ENST00000474326 CBLN2Q8IUK8 224 aa10.39□□□□□ -0.75
PFDN4-203ENST00000474326 CHCHD1Q96BP2 118 aaKnown RBP10.39□□□□□ -0.75
PFDN4-203ENST00000474326 FAM168BA1KXE4 195 aa10.38□□□□□ -0.75
PFDN4-203ENST00000474326 M0QXV9 152 aa10.38□□□□□ -0.75
PFDN4-203ENST00000474326 IGLC3P0DOY3 106 aa10.37□□□□□ -0.75
PFDN4-203ENST00000474326 HERC1Q15751 4861 aa10.37□□□□□ -0.75
PFDN4-203ENST00000474326 C1orf137Q5JT78 98 aa10.37□□□□□ -0.75
PFDN4-203ENST00000474326 SERTAD4-AS1Q5TG53 156 aa10.37□□□□□ -0.75
PFDN4-203ENST00000474326 URB1-AS1Q96HZ7 61 aa10.37□□□□□ -0.75
PFDN4-203ENST00000474326 YPEL4Q96NS1 127 aa10.37□□□□□ -0.75
PFDN4-203ENST00000474326 PSORS1C2Q9UIG4 136 aa10.37□□□□□ -0.75
PFDN4-203ENST00000474326 A0A096LNJ9 63 aa10.36□□□□□ -0.75
PFDN4-203ENST00000474326 BAGE3Q86Y29 109 aa10.36□□□□□ -0.75
PFDN4-203ENST00000474326 HSBP1O75506 76 aa10.35□□□□□ -0.75
PFDN4-203ENST00000474326 C9orf129Q5T035 196 aaKnown RBP10.34□□□□□ -0.75
PFDN4-203ENST00000474326 SLC7A5P1Q8MH63 180 aa10.34□□□□□ -0.75
PFDN4-203ENST00000474326 TMEM170BQ5T4T1 132 aa10.33□□□□□ -0.76
PFDN4-203ENST00000474326 XAGE1AQ9HD64 81 aa10.33□□□□□ -0.76
PFDN4-203ENST00000474326 LBHQ53QV2 105 aaPredicted RBP10.32□□□□□ -0.76
PFDN4-203ENST00000474326 SFTA2Q6UW10 78 aa10.32□□□□□ -0.76
PFDN4-203ENST00000474326 CHTOPQ9Y3Y2 248 aaKnown RBP10.32□□□□□ -0.76
PFDN4-203ENST00000474326 ZNF22P17026 224 aaPredicted RBP10.31□□□□□ -0.76
PFDN4-203ENST00000474326 IFI27L1Q96BM0 104 aa10.31□□□□□ -0.76
PFDN4-203ENST00000474326 PKHD1L1Q86WI1 4243 aa10.31□□□□□ -0.76
PFDN4-203ENST00000474326 TRGC2P03986 189 aa10.3□□□□□ -0.76
PFDN4-203ENST00000474326 IGLV7-43P04211 117 aa10.29□□□□□ -0.76
PFDN4-203ENST00000474326 SRSF9Q13242 221 aaKnown RBP eCLIP10.29□□□□□ -0.76
PFDN4-203ENST00000474326 DIRC1Q969H9 104 aa10.29□□□□□ -0.76
PFDN4-203ENST00000474326 LINC01600Q96MT4 127 aa10.29□□□□□ -0.76
PFDN4-203ENST00000474326 TRAV12-1A0A0B4J245 112 aa10.28□□□□□ -0.76
PFDN4-203ENST00000474326 IGLV5-39A0A0G2JS06 123 aa10.28□□□□□ -0.76
PFDN4-203ENST00000474326 C11orf86A6NJI1 115 aa10.28□□□□□ -0.76
PFDN4-203ENST00000474326 C22orf24Q9Y442 160 aa10.28□□□□□ -0.76
PFDN4-203ENST00000474326 LRP1Q07954 4544 aaKnown RBP10.28□□□□□ -0.76
PFDN4-203ENST00000474326 PFN2P35080 140 aa10.27□□□□□ -0.77
PFDN4-203ENST00000474326 FAT3Q8TDW7 4589 aa10.26□□□□□ -0.77
PFDN4-203ENST00000474326 NKAPP1Q8N9T2 125 aa10.26□□□□□ -0.77
PFDN4-203ENST00000474326 TP73-AS1Q9UF72 201 aa10.26□□□□□ -0.77
PFDN4-203ENST00000474326 H0Y8G0 127 aa10.25□□□□□ -0.77
PFDN4-203ENST00000474326 LEPROTL1O95214 131 aa10.25□□□□□ -0.77
PFDN4-203ENST00000474326 MRPL55Q7Z7F7 128 aaKnown RBP10.25□□□□□ -0.77
PFDN4-203ENST00000474326 KRTAP7-1Q8IUC3 87 aa10.25□□□□□ -0.77
PFDN4-203ENST00000474326 FAM19A2Q8N3H0 131 aa10.25□□□□□ -0.77
PFDN4-203ENST00000474326 ERG28Q9UKR5 140 aa10.25□□□□□ -0.77
PFDN4-203ENST00000474326 NUPR1O60356 82 aa10.24□□□□□ -0.77
PFDN4-203ENST00000474326 MT1HL1P0DM35 61 aa10.24□□□□□ -0.77
PFDN4-203ENST00000474326 COX17Q14061 63 aa10.24□□□□□ -0.77
PFDN4-203ENST00000474326 ODF1Q14990 250 aa10.24□□□□□ -0.77
PFDN4-203ENST00000474326 PLA2G2DQ9UNK4 145 aa10.24□□□□□ -0.77
PFDN4-203ENST00000474326 HSPB8Q9UJY1 196 aa10.23□□□□□ -0.77
PFDN4-203ENST00000474326 SERF1AO75920 110 aa10.22□□□□□ -0.77
PFDN4-203ENST00000474326 ZNF625Q96I27 306 aaPredicted RBP10.22□□□□□ -0.77
PFDN4-203ENST00000474326 COLCA2A8K830 154 aa10.21□□□□□ -0.77
PFDN4-203ENST00000474326 H0Y9J4 135 aa10.21□□□□□ -0.77
PFDN4-203ENST00000474326 KRTAP11-1Q8IUC1 163 aa10.21□□□□□ -0.77
PFDN4-203ENST00000474326 TMEM223A0PJW6 202 aa10.2□□□□□ -0.78
PFDN4-203ENST00000474326 ATP6V1G1O75348 118 aa10.2□□□□□ -0.78
PFDN4-203ENST00000474326 RPL24P83731 157 aaKnown RBP10.2□□□□□ -0.78
PFDN4-203ENST00000474326 GAGE10A6NGK3 116 aa10.18□□□□□ -0.78
PFDN4-203ENST00000474326 FABP4P15090 132 aa10.18□□□□□ -0.78
PFDN4-203ENST00000474326 PLNP26678 52 aa10.18□□□□□ -0.78
PFDN4-203ENST00000474326 LINC00158P58513 81 aa10.18□□□□□ -0.78
PFDN4-203ENST00000474326 LINC00167Q96N53 147 aa10.18□□□□□ -0.78
PFDN4-203ENST00000474326 SND1-IT1Q9HBX3 110 aa10.18□□□□□ -0.78
PFDN4-203ENST00000474326 IGLV5-37A0A075B6J1 123 aa10.17□□□□□ -0.78
PFDN4-203ENST00000474326 RPL37AP8A6NKH3 93 aa10.17□□□□□ -0.78
PFDN4-203ENST00000474326 RPL28P46779 137 aaKnown RBP10.17□□□□□ -0.78
PFDN4-203ENST00000474326 LINC00587B1AMM8 73 aa10.16□□□□□ -0.78
PFDN4-203ENST00000474326 ZNF861PO60384 105 aa10.16□□□□□ -0.78
PFDN4-203ENST00000474326 HERVK_113P61574 105 aa10.16□□□□□ -0.78
PFDN4-203ENST00000474326 HERV-K104P63124 156 aa10.16□□□□□ -0.78
PFDN4-203ENST00000474326 MEIG1Q5JSS6 88 aa10.16□□□□□ -0.78
PFDN4-203ENST00000474326 BCE1O60756 84 aa10.15□□□□□ -0.78
PFDN4-203ENST00000474326 MAP1LC3CQ9BXW4 147 aa10.15□□□□□ -0.78
PFDN4-203ENST00000474326 KRTAP10-8P60410 259 aa10.14□□□□□ -0.79
PFDN4-203ENST00000474326 MYMXA0A1B0GTQ4 84 aa10.13□□□□□ -0.79
PFDN4-203ENST00000474326 DPM2O94777 84 aa10.13□□□□□ -0.79
PFDN4-203ENST00000474326 UBE2AP49459 152 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms