RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 SDC2P34741 201 aa1.07□□□□□ -2.24
CALD1-216ENST00000473714 RPL35P42766 123 aaKnown RBP1.07□□□□□ -2.24
CALD1-216ENST00000473714 ZNF846Q147U1 533 aa1.07□□□□□ -2.24
CALD1-216ENST00000473714 SURF2Q15527 256 aaPredicted RBP1.07□□□□□ -2.24
CALD1-216ENST00000473714 MSMO1Q15800 293 aa1.07□□□□□ -2.24
CALD1-216ENST00000473714 SPINK9Q5DT21 86 aa1.07□□□□□ -2.24
CALD1-216ENST00000473714 TMEM78Q5T7P6 136 aa1.07□□□□□ -2.24
CALD1-216ENST00000473714 C2orf82Q6UX34 121 aa1.07□□□□□ -2.24
CALD1-216ENST00000473714 SFT2D1Q8WV19 159 aa1.07□□□□□ -2.24
CALD1-216ENST00000473714 CHCHD1Q96BP2 118 aaKnown RBP1.07□□□□□ -2.24
CALD1-216ENST00000473714 SPRR2FQ96RM1 72 aa1.07□□□□□ -2.24
CALD1-216ENST00000473714 SPANXA1Q9NS26 97 aa1.07□□□□□ -2.24
CALD1-216ENST00000473714 V9GYS6 101 aa1.07□□□□□ -2.24
CALD1-216ENST00000473714 TRDV1A0A1B0GX56 115 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 CCDC160A6NGH7 325 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 C17orf112F2Z3M2 114 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 GABARAPH6UMI1 98 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 K7ERJ3 54 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 YPEL1O60688 119 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 BCL2P10415 239 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 HTN1P15515 57 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 HIST1H1BP16401 226 aaKnown RBP1.06□□□□□ -2.24
CALD1-216ENST00000473714 S100A11P31949 105 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 ETV6P41212 452 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 RBP2P50120 134 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 UBE2D1P51668 147 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 DNAJB13P59910 316 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 RAB4BP61018 213 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 HBBP68871 147 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 PSG9Q00887 426 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 Q1T7F1 81 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 PIGYQ3MUY2 71 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 TOMM20LQ6UXN7 152 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 VSTM2AQ8TAG5 236 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 ZNF431Q8TF32 576 aaPredicted RBP1.06□□□□□ -2.24
CALD1-216ENST00000473714 NAA38Q9BRA0 125 aaKnown RBP1.06□□□□□ -2.24
CALD1-216ENST00000473714 TMEM126AQ9H061 195 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 SPANXCQ9NY87 97 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 NAT8BQ9UHF3 227 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 JPT1Q9UK76 154 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 TRAPPC2LQ9UL33 140 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 SNURFQ9Y675 71 aa1.06□□□□□ -2.24
CALD1-216ENST00000473714 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 LOC107986453A0A1B0GWG9 222 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 IGKV2-29A2NJV5 120 aaPredicted RBP1.05□□□□□ -2.24
CALD1-216ENST00000473714 M0R2Z0 102 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 HYPMO75409 117 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 DHFRP00374 187 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 CD2P06729 351 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 SAA1P0DJI8 122 aaPredicted RBP1.05□□□□□ -2.24
CALD1-216ENST00000473714 RAB5CP51148 216 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 SPINK13Q1W4C9 94 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 VMA21Q3ZAQ7 101 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 FAM74A1Q5RGS3 127 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 LINC01590Q5TEZ4 76 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 TEX261Q6UWH6 196 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 OR5H6Q8NGV6 325 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 TMEM167AQ8TBQ9 72 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 THEM6Q8WUY1 208 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 DIRC1Q969H9 104 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 AP1S3Q96PC3 154 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 TAF9BQ9HBM6 251 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 U3KQ87 197 aa1.05□□□□□ -2.24
CALD1-216ENST00000473714 TRAV12-2A0A075B6T6 113 aa1.04□□□□□ -2.24
CALD1-216ENST00000473714 TRAV12-1A0A0B4J245 112 aa1.04□□□□□ -2.24
CALD1-216ENST00000473714 A6NN06 94 aa1.04□□□□□ -2.24
CALD1-216ENST00000473714 J3KT08 172 aa1.04□□□□□ -2.24
CALD1-216ENST00000473714 LSM3P62310 102 aaKnown RBP1.04□□□□□ -2.24
CALD1-216ENST00000473714 SNRPD3P62318 126 aaKnown RBP1.04□□□□□ -2.24
CALD1-216ENST00000473714 CCDC153Q494R4 210 aa1.04□□□□□ -2.24
CALD1-216ENST00000473714 Q56UQ5 140 aa1.04□□□□□ -2.24
CALD1-216ENST00000473714 FOXI2Q6ZQN5 318 aa1.04□□□□□ -2.24
CALD1-216ENST00000473714 PRR15Q8IV56 129 aa1.04□□□□□ -2.24
CALD1-216ENST00000473714 OR10AC1Q8NH08 325 aa1.04□□□□□ -2.24
CALD1-216ENST00000473714 TMEM263Q8WUH6 116 aaKnown RBP1.04□□□□□ -2.24
CALD1-216ENST00000473714 TP53RKQ96S44 253 aa1.04□□□□□ -2.24
CALD1-216ENST00000473714 PRO0255Q9UI72 69 aa1.04□□□□□ -2.24
CALD1-216ENST00000473714 TPRKBQ9Y3C4 175 aa1.04□□□□□ -2.24
CALD1-216ENST00000473714 IGKV2-40A0A087WW87 121 aaPredicted RBP1.03□□□□□ -2.24
CALD1-216ENST00000473714 TRBV6-8A0A0A6YYG3 113 aa1.03□□□□□ -2.24
CALD1-216ENST00000473714 TRAV13-1A0A0B4J241 112 aa1.03□□□□□ -2.24
CALD1-216ENST00000473714 IGLC7A0M8Q6 106 aa1.03□□□□□ -2.24
CALD1-216ENST00000473714 A8MTW9 85 aa1.03□□□□□ -2.24
CALD1-216ENST00000473714 K7EIM0 57 aa1.03□□□□□ -2.24
CALD1-216ENST00000473714 GEMIN2O14893 280 aaKnown RBP1.03□□□□□ -2.24
CALD1-216ENST00000473714 ERC2-IT1O76042 136 aa1.03□□□□□ -2.24
CALD1-216ENST00000473714 IGKV2D-40P01614 121 aaPredicted RBP1.03□□□□□ -2.24
CALD1-216ENST00000473714 TPT1P13693 172 aaKnown RBP1.03□□□□□ -2.24
CALD1-216ENST00000473714 GTF2A1P52655 376 aaPredicted RBP1.03□□□□□ -2.24
CALD1-216ENST00000473714 PCOTHQ58A44 107 aa1.03□□□□□ -2.24
CALD1-216ENST00000473714 HRCT1Q6UXD1 115 aa1.03□□□□□ -2.24
CALD1-216ENST00000473714 LINC00305Q7Z4B0 112 aa1.03□□□□□ -2.24
CALD1-216ENST00000473714 TEN1Q86WV5 123 aa1.03□□□□□ -2.24
CALD1-216ENST00000473714 OR8I2Q8N0Y5 310 aa1.03□□□□□ -2.24
CALD1-216ENST00000473714 OTOSQ8NHW6 89 aa1.03□□□□□ -2.24
CALD1-216ENST00000473714 ZCCHC13Q8WW36 166 aaKnown RBP1.03□□□□□ -2.24
CALD1-216ENST00000473714 BORCS5Q969J3 196 aa1.03□□□□□ -2.24
CALD1-216ENST00000473714 RAB37Q96AX2 223 aa1.03□□□□□ -2.24
CALD1-216ENST00000473714 ZNF625Q96I27 306 aaPredicted RBP1.03□□□□□ -2.24
CALD1-216ENST00000473714 PRELID3AQ96N28 172 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms