RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 Q8IZM0 81 aa7.92□□□□□ -1.14
C9orf85-204ENST00000473252 PACRGQ96M98 296 aaPredicted RBP7.92□□□□□ -1.14
C9orf85-204ENST00000473252 GEMIN7Q9H840 131 aaKnown RBP7.92□□□□□ -1.14
C9orf85-204ENST00000473252 C6orf48Q9UBA6 75 aa7.92□□□□□ -1.14
C9orf85-204ENST00000473252 PRSS2P07478 247 aa7.91□□□□□ -1.14
C9orf85-204ENST00000473252 PRR3P79522 188 aaKnown RBP7.91□□□□□ -1.14
C9orf85-204ENST00000473252 C10orf25Q5T742 122 aa7.91□□□□□ -1.14
C9orf85-204ENST00000473252 ZC2HC1BQ5TFG8 222 aa7.91□□□□□ -1.14
C9orf85-204ENST00000473252 Q6ZRP5 223 aa7.91□□□□□ -1.14
C9orf85-204ENST00000473252 DMBT1Q9UGM3 2413 aaPredicted RBP7.9□□□□□ -1.14
C9orf85-204ENST00000473252 A0A0J9YXV3 536 aa7.9□□□□□ -1.14
C9orf85-204ENST00000473252 TINCRA0A1B0GVN0 87 aa7.9□□□□□ -1.14
C9orf85-204ENST00000473252 A0A1W2PNN7 141 aa7.9□□□□□ -1.14
C9orf85-204ENST00000473252 C9orf116Q5BN46 136 aaPredicted RBP7.9□□□□□ -1.14
C9orf85-204ENST00000473252 NDUFC2-KCTD14E9PQ53 114 aa7.89□□□□□ -1.15
C9orf85-204ENST00000473252 LINC00614P0C842 121 aa7.89□□□□□ -1.15
C9orf85-204ENST00000473252 CXCL5P42830 114 aa7.89□□□□□ -1.15
C9orf85-204ENST00000473252 RAB5BP61020 215 aa7.89□□□□□ -1.15
C9orf85-204ENST00000473252 CKS1BP61024 79 aa7.89□□□□□ -1.15
C9orf85-204ENST00000473252 PMVKQ15126 192 aa7.89□□□□□ -1.15
C9orf85-204ENST00000473252 C6orf226Q5I0X4 101 aa7.89□□□□□ -1.15
C9orf85-204ENST00000473252 CDKN2A-AS1Q9UH64 79 aa7.89□□□□□ -1.15
C9orf85-204ENST00000473252 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
C9orf85-204ENST00000473252 IGLV5-45A0A087WSX0 123 aa7.88□□□□□ -1.15
C9orf85-204ENST00000473252 SPINK6Q6UWN8 80 aa7.88□□□□□ -1.15
C9orf85-204ENST00000473252 C18orf32Q8TCD1 76 aa7.88□□□□□ -1.15
C9orf85-204ENST00000473252 CST9LQ9H4G1 147 aa7.88□□□□□ -1.15
C9orf85-204ENST00000473252 PDZD11Q5EBL8 140 aa7.87□□□□□ -1.15
C9orf85-204ENST00000473252 SERTAD4-AS1Q5TG53 156 aa7.87□□□□□ -1.15
C9orf85-204ENST00000473252 KRTAP4-12Q9BQ66 201 aa7.87□□□□□ -1.15
C9orf85-204ENST00000473252 TOMM7Q9P0U1 55 aa7.87□□□□□ -1.15
C9orf85-204ENST00000473252 HERC1Q15751 4861 aa7.86□□□□□ -1.15
C9orf85-204ENST00000473252 HBDP02042 147 aa7.86□□□□□ -1.15
C9orf85-204ENST00000473252 ODF1Q14990 250 aa7.86□□□□□ -1.15
C9orf85-204ENST00000473252 C2orf82Q6UX34 121 aa7.86□□□□□ -1.15
C9orf85-204ENST00000473252 LINC00469Q8N7U9 141 aa7.86□□□□□ -1.15
C9orf85-204ENST00000473252 FAT3Q8TDW7 4589 aa7.86□□□□□ -1.15
C9orf85-204ENST00000473252 LRP1Q07954 4544 aaKnown RBP7.85□□□□□ -1.15
C9orf85-204ENST00000473252 F8VRH5 84 aa7.85□□□□□ -1.15
C9orf85-204ENST00000473252 SRSF9Q13242 221 aaKnown RBP eCLIP7.85□□□□□ -1.15
C9orf85-204ENST00000473252 GAGE2EQ4V326 116 aa7.85□□□□□ -1.15
C9orf85-204ENST00000473252 URB1-AS1Q96HZ7 61 aa7.85□□□□□ -1.15
C9orf85-204ENST00000473252 YPEL4Q96NS1 127 aa7.85□□□□□ -1.15
C9orf85-204ENST00000473252 GAGE2DQ9UEU5 116 aa7.85□□□□□ -1.15
C9orf85-204ENST00000473252 A0A096LNJ9 63 aa7.84□□□□□ -1.15
C9orf85-204ENST00000473252 SMIM1B2RUZ4 78 aa7.84□□□□□ -1.15
C9orf85-204ENST00000473252 H3BRM9 83 aa7.84□□□□□ -1.15
C9orf85-204ENST00000473252 ATP5LO75964 103 aa7.84□□□□□ -1.15
C9orf85-204ENST00000473252 REG3GQ6UW15 175 aa7.83□□□□□ -1.16
C9orf85-204ENST00000473252 PHF5AQ7RTV0 110 aaKnown RBP7.83□□□□□ -1.16
C9orf85-204ENST00000473252 PSORS1C2Q9UIG4 136 aa7.83□□□□□ -1.16
C9orf85-204ENST00000473252 IGLC3P0DOY3 106 aa7.82□□□□□ -1.16
C9orf85-204ENST00000473252 COX7B2Q8TF08 81 aa7.82□□□□□ -1.16
C9orf85-204ENST00000473252 CHCHD1Q96BP2 118 aaKnown RBP7.82□□□□□ -1.16
C9orf85-204ENST00000473252 LINC01600Q96MT4 127 aa7.82□□□□□ -1.16
C9orf85-204ENST00000473252 MT1HL1P0DM35 61 aa7.81□□□□□ -1.16
C9orf85-204ENST00000473252 C9orf129Q5T035 196 aaKnown RBP7.81□□□□□ -1.16
C9orf85-204ENST00000473252 KRTAP9-9Q9BYP9 154 aa7.81□□□□□ -1.16
C9orf85-204ENST00000473252 KRTAP9-4Q9BYQ2 154 aa7.81□□□□□ -1.16
C9orf85-204ENST00000473252 FAM168BA1KXE4 195 aa7.8□□□□□ -1.16
C9orf85-204ENST00000473252 FAM19A5Q7Z5A7 132 aaPredicted RBP7.8□□□□□ -1.16
C9orf85-204ENST00000473252 M0QXV9 152 aa7.79□□□□□ -1.16
C9orf85-204ENST00000473252 NDUFA6P56556 154 aa7.79□□□□□ -1.16
C9orf85-204ENST00000473252 C1orf137Q5JT78 98 aa7.79□□□□□ -1.16
C9orf85-204ENST00000473252 KRTAP7-1Q8IUC3 87 aa7.79□□□□□ -1.16
C9orf85-204ENST00000473252 KRTAP4-8A0A0G2JLE6 195 aa7.78□□□□□ -1.16
C9orf85-204ENST00000473252 SPINK8P0C7L1 97 aa7.78□□□□□ -1.16
C9orf85-204ENST00000473252 LBHQ53QV2 105 aaPredicted RBP7.78□□□□□ -1.16
C9orf85-204ENST00000473252 SFTA2Q6UW10 78 aa7.78□□□□□ -1.16
C9orf85-204ENST00000473252 TP73-AS1Q9UF72 201 aa7.78□□□□□ -1.16
C9orf85-204ENST00000473252 IGLV5-39A0A0G2JS06 123 aa7.77□□□□□ -1.17
C9orf85-204ENST00000473252 IGLV7-43P04211 117 aa7.77□□□□□ -1.17
C9orf85-204ENST00000473252 ZNF22P17026 224 aaPredicted RBP7.77□□□□□ -1.17
C9orf85-204ENST00000473252 UBE2BP63146 152 aa7.77□□□□□ -1.17
C9orf85-204ENST00000473252 PMCHL1Q16048 86 aa7.77□□□□□ -1.17
C9orf85-204ENST00000473252 BAGE3Q86Y29 109 aa7.77□□□□□ -1.17
C9orf85-204ENST00000473252 PLA2G2DQ9UNK4 145 aa7.77□□□□□ -1.17
C9orf85-204ENST00000473252 TRAV12-1A0A0B4J245 112 aa7.76□□□□□ -1.17
C9orf85-204ENST00000473252 CBLN2Q8IUK8 224 aa7.76□□□□□ -1.17
C9orf85-204ENST00000473252 DIRC1Q969H9 104 aa7.76□□□□□ -1.17
C9orf85-204ENST00000473252 NUPR1O60356 82 aa7.75□□□□□ -1.17
C9orf85-204ENST00000473252 HSBP1O75506 76 aa7.75□□□□□ -1.17
C9orf85-204ENST00000473252 COX17Q14061 63 aa7.75□□□□□ -1.17
C9orf85-204ENST00000473252 IFI27L1Q96BM0 104 aa7.75□□□□□ -1.17
C9orf85-204ENST00000473252 XAGE1AQ9HD64 81 aa7.75□□□□□ -1.17
C9orf85-204ENST00000473252 C22orf24Q9Y442 160 aa7.75□□□□□ -1.17
C9orf85-204ENST00000473252 KRTAP10-8P60410 259 aa7.74□□□□□ -1.17
C9orf85-204ENST00000473252 CHTOPQ9Y3Y2 248 aaKnown RBP7.74□□□□□ -1.17
C9orf85-204ENST00000473252 C11orf86A6NJI1 115 aa7.73□□□□□ -1.17
C9orf85-204ENST00000473252 TRGC2P03986 189 aa7.73□□□□□ -1.17
C9orf85-204ENST00000473252 TMEM170BQ5T4T1 132 aa7.73□□□□□ -1.17
C9orf85-204ENST00000473252 MRPL55Q7Z7F7 128 aaKnown RBP7.73□□□□□ -1.17
C9orf85-204ENST00000473252 KRTAP11-1Q8IUC1 163 aa7.73□□□□□ -1.17
C9orf85-204ENST00000473252 SLC7A5P1Q8MH63 180 aa7.73□□□□□ -1.17
C9orf85-204ENST00000473252 IGLV5-37A0A075B6J1 123 aa7.72□□□□□ -1.17
C9orf85-204ENST00000473252 H0Y9J4 135 aa7.71□□□□□ -1.18
C9orf85-204ENST00000473252 TMEM223A0PJW6 202 aa7.7□□□□□ -1.18
C9orf85-204ENST00000473252 ERG28Q9UKR5 140 aa7.7□□□□□ -1.18
C9orf85-204ENST00000473252 COLCA2A8K830 154 aa7.69□□□□□ -1.18
C9orf85-204ENST00000473252 ZNF861PO60384 105 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms