RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.77□□□□□ -0.37
UBQLN4-203ENST00000472638 LOC105371267A0A1B0GV96 52 aa12.76□□□□□ -0.37
UBQLN4-203ENST00000472638 CFAP161Q6P656 301 aa12.76□□□□□ -0.37
UBQLN4-203ENST00000472638 SDIM1Q6ZPB5 146 aa12.76□□□□□ -0.37
UBQLN4-203ENST00000472638 LINC01561Q8N1V8 128 aa12.76□□□□□ -0.37
UBQLN4-203ENST00000472638 CDKN2A-AS1Q9UH64 79 aa12.76□□□□□ -0.37
UBQLN4-203ENST00000472638 A0A087WZ39 114 aa12.75□□□□□ -0.37
UBQLN4-203ENST00000472638 H3BRM9 83 aa12.75□□□□□ -0.37
UBQLN4-203ENST00000472638 PANO1I0J062 215 aa12.75□□□□□ -0.37
UBQLN4-203ENST00000472638 COX7A2LO14548 114 aa12.75□□□□□ -0.37
UBQLN4-203ENST00000472638 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.74□□□□□ -0.37
UBQLN4-203ENST00000472638 SCGB1D1O95968 90 aa12.74□□□□□ -0.37
UBQLN4-203ENST00000472638 TMEM170BQ5T4T1 132 aa12.74□□□□□ -0.37
UBQLN4-203ENST00000472638 IGHV3-64A0A075B6Q5 118 aa12.73□□□□□ -0.37
UBQLN4-203ENST00000472638 FLG2Q5D862 2391 aaPredicted RBP12.73□□□□□ -0.37
UBQLN4-203ENST00000472638 C5orf38Q86SI9 138 aa12.72□□□□□ -0.37
UBQLN4-203ENST00000472638 PYY3Q5JQD4 70 aa12.71□□□□□ -0.37
UBQLN4-203ENST00000472638 MYCBP2O75592 4640 aa12.7□□□□□ -0.38
UBQLN4-203ENST00000472638 TMEM223A0PJW6 202 aa12.7□□□□□ -0.38
UBQLN4-203ENST00000472638 SMIM1B2RUZ4 78 aa12.7□□□□□ -0.38
UBQLN4-203ENST00000472638 CHTF8P0CG12 524 aa12.7□□□□□ -0.38
UBQLN4-203ENST00000472638 DPH3Q96FX2 82 aa12.7□□□□□ -0.38
UBQLN4-203ENST00000472638 APOMO95445 188 aa12.69□□□□□ -0.38
UBQLN4-203ENST00000472638 MALP21145 153 aa12.69□□□□□ -0.38
UBQLN4-203ENST00000472638 HERVK_113P61574 105 aa12.69□□□□□ -0.38
UBQLN4-203ENST00000472638 ATOH7Q8N100 152 aa12.69□□□□□ -0.38
UBQLN4-203ENST00000472638 GVQW2A0A096LPI5 108 aaPredicted RBP12.68□□□□□ -0.38
UBQLN4-203ENST00000472638 IGHV1-58A0A0C4DH39 117 aa12.68□□□□□ -0.38
UBQLN4-203ENST00000472638 SPINK8P0C7L1 97 aa12.68□□□□□ -0.38
UBQLN4-203ENST00000472638 KRTAP10-4P60372 401 aaPredicted RBP12.68□□□□□ -0.38
UBQLN4-203ENST00000472638 IGLV5-39A0A0G2JS06 123 aa12.67□□□□□ -0.38
UBQLN4-203ENST00000472638 LINC00526Q96FQ7 95 aa12.67□□□□□ -0.38
UBQLN4-203ENST00000472638 RPL37AP61513 92 aaKnown RBP12.66□□□□□ -0.38
UBQLN4-203ENST00000472638 HERC1Q15751 4861 aa12.65□□□□□ -0.38
UBQLN4-203ENST00000472638 SMIM6P0DI80 62 aa12.65□□□□□ -0.38
UBQLN4-203ENST00000472638 DMBT1Q9UGM3 2413 aaPredicted RBP12.64□□□□□ -0.39
UBQLN4-203ENST00000472638 HSBP1L1C9JCN9 74 aa12.64□□□□□ -0.39
UBQLN4-203ENST00000472638 E9PLD3 99 aa12.64□□□□□ -0.39
UBQLN4-203ENST00000472638 CIRBPQ14011 172 aaKnown RBP12.64□□□□□ -0.39
UBQLN4-203ENST00000472638 STPG4Q8N801 248 aa12.64□□□□□ -0.39
UBQLN4-203ENST00000472638 ORAOV1Q8WV07 137 aa12.64□□□□□ -0.39
UBQLN4-203ENST00000472638 A0A087WYN8 130 aa12.63□□□□□ -0.39
UBQLN4-203ENST00000472638 J3QL48 77 aa12.63□□□□□ -0.39
UBQLN4-203ENST00000472638 Q8IZM0 81 aa12.63□□□□□ -0.39
UBQLN4-203ENST00000472638 SPACA4Q8TDM5 124 aa12.63□□□□□ -0.39
UBQLN4-203ENST00000472638 SPAG11BQ08648 103 aa12.62□□□□□ -0.39
UBQLN4-203ENST00000472638 PLEKHB2Q96CS7 222 aa12.62□□□□□ -0.39
UBQLN4-203ENST00000472638 IGKV2-24A0A0C4DH68 120 aa12.61□□□□□ -0.39
UBQLN4-203ENST00000472638 LEPROTO15243 131 aa12.61□□□□□ -0.39
UBQLN4-203ENST00000472638 ZNF561-AS1K7EIQ3 104 aa12.6□□□□□ -0.39
UBQLN4-203ENST00000472638 MAJINQ3KP22 176 aa12.6□□□□□ -0.39
UBQLN4-203ENST00000472638 ANKRD39Q53RE8 183 aa12.6□□□□□ -0.39
UBQLN4-203ENST00000472638 COX7B2Q8TF08 81 aa12.6□□□□□ -0.39
UBQLN4-203ENST00000472638 VAMP8Q9BV40 100 aa12.6□□□□□ -0.39
UBQLN4-203ENST00000472638 PRSS2P07478 247 aa12.59□□□□□ -0.39
UBQLN4-203ENST00000472638 KIAA0087Q14695 138 aa12.59□□□□□ -0.39
UBQLN4-203ENST00000472638 CARD19Q96LW7 228 aa12.59□□□□□ -0.39
UBQLN4-203ENST00000472638 TOMM7Q9P0U1 55 aa12.59□□□□□ -0.39
UBQLN4-203ENST00000472638 F8WDY8 70 aa12.58□□□□□ -0.4
UBQLN4-203ENST00000472638 CXCL5P42830 114 aa12.58□□□□□ -0.4
UBQLN4-203ENST00000472638 A0A096LNI7 61 aa12.57□□□□□ -0.4
UBQLN4-203ENST00000472638 J3QQQ9 107 aa12.57□□□□□ -0.4
UBQLN4-203ENST00000472638 HNRNPA3P51991 378 aaKnown RBP12.57□□□□□ -0.4
UBQLN4-203ENST00000472638 TSPEAR-AS2P59090 65 aa12.57□□□□□ -0.4
UBQLN4-203ENST00000472638 SFTA2Q6UW10 78 aa12.57□□□□□ -0.4
UBQLN4-203ENST00000472638 C2orf48Q96LS8 159 aa12.57□□□□□ -0.4
UBQLN4-203ENST00000472638 IGKV2D-26A0A0A0MRZ7 120 aa12.56□□□□□ -0.4
UBQLN4-203ENST00000472638 KRTAP29-1A8MX34 341 aaPredicted RBP12.56□□□□□ -0.4
UBQLN4-203ENST00000472638 SYCNQ0VAF6 134 aa12.56□□□□□ -0.4
UBQLN4-203ENST00000472638 C6orf226Q5I0X4 101 aa12.56□□□□□ -0.4
UBQLN4-203ENST00000472638 PLAC8Q9NZF1 115 aa12.56□□□□□ -0.4
UBQLN4-203ENST00000472638 PAM16Q9Y3D7 125 aa12.56□□□□□ -0.4
UBQLN4-203ENST00000472638 LGALS3P17931 250 aaKnown RBP12.55□□□□□ -0.4
UBQLN4-203ENST00000472638 NMUP48645 174 aa12.55□□□□□ -0.4
UBQLN4-203ENST00000472638 S100A12P80511 92 aa12.55□□□□□ -0.4
UBQLN4-203ENST00000472638 SPATA45Q537H7 98 aa12.54□□□□□ -0.4
UBQLN4-203ENST00000472638 NDUFA1O15239 70 aa12.53□□□□□ -0.4
UBQLN4-203ENST00000472638 CKS1BP61024 79 aa12.53□□□□□ -0.4
UBQLN4-203ENST00000472638 Q6ZRU5 148 aa12.53□□□□□ -0.4
UBQLN4-203ENST00000472638 ZNF625Q96I27 306 aaPredicted RBP12.53□□□□□ -0.4
UBQLN4-203ENST00000472638 CAMK2N2Q96S95 79 aa12.52□□□□□ -0.41
UBQLN4-203ENST00000472638 NDUFA12Q9UI09 145 aa12.52□□□□□ -0.41
UBQLN4-203ENST00000472638 MYMXA0A1B0GTQ4 84 aa12.5□□□□□ -0.41
UBQLN4-203ENST00000472638 HERV-K104P63124 156 aa12.5□□□□□ -0.41
UBQLN4-203ENST00000472638 C7orf33Q8WU49 177 aa12.5□□□□□ -0.41
UBQLN4-203ENST00000472638 C2orf82Q6UX34 121 aa12.49□□□□□ -0.41
UBQLN4-203ENST00000472638 C12orf57Q99622 126 aa12.49□□□□□ -0.41
UBQLN4-203ENST00000472638 PKIGQ9Y2B9 76 aa12.49□□□□□ -0.41
UBQLN4-203ENST00000472638 TRBV30A0A0K0K1B3 111 aa12.48□□□□□ -0.41
UBQLN4-203ENST00000472638 ZNF815PA8K554 130 aa12.48□□□□□ -0.41
UBQLN4-203ENST00000472638 COX8AP10176 69 aa12.48□□□□□ -0.41
UBQLN4-203ENST00000472638 GAGE2BQ13066 116 aa12.48□□□□□ -0.41
UBQLN4-203ENST00000472638 PCP2Q8IVA1 136 aa12.48□□□□□ -0.41
UBQLN4-203ENST00000472638 LINC00474Q9P2X8 69 aa12.48□□□□□ -0.41
UBQLN4-203ENST00000472638 LRP1Q07954 4544 aaKnown RBP12.48□□□□□ -0.41
UBQLN4-203ENST00000472638 LOC107984640A0A0U1RRK4 108 aa12.47□□□□□ -0.41
UBQLN4-203ENST00000472638 OXTP01178 125 aa12.47□□□□□ -0.41
UBQLN4-203ENST00000472638 RNF151Q2KHN1 245 aa12.47□□□□□ -0.41
UBQLN4-203ENST00000472638 UNQ6190/PRO20217Q6UXQ8 127 aa12.47□□□□□ -0.41
UBQLN4-203ENST00000472638 TTTY13Q9BZ97 58 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms