RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 C22orf24Q9Y442 160 aa3.36□□□□□ -1.87
ITGB1-209ENST00000472147 HMSDA8MTL9 139 aa3.35□□□□□ -1.87
ITGB1-209ENST00000472147 PPP1R2P9O14990 202 aa3.35□□□□□ -1.87
ITGB1-209ENST00000472147 ZNF345Q14585 488 aa3.35□□□□□ -1.87
ITGB1-209ENST00000472147 LINC00242Q5T6M2 205 aa3.35□□□□□ -1.87
ITGB1-209ENST00000472147 FAM231DQ6ZW35 169 aa3.35□□□□□ -1.87
ITGB1-209ENST00000472147 LINC01561Q8N1V8 128 aa3.35□□□□□ -1.87
ITGB1-209ENST00000472147 LINC00337Q8N6G1 96 aa3.35□□□□□ -1.87
ITGB1-209ENST00000472147 BORCS7Q96B45 105 aa3.35□□□□□ -1.87
ITGB1-209ENST00000472147 PACRGQ96M98 296 aaPredicted RBP3.35□□□□□ -1.87
ITGB1-209ENST00000472147 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
ITGB1-209ENST00000472147 PPDPFQ9H3Y8 114 aa3.35□□□□□ -1.87
ITGB1-209ENST00000472147 A0A1B0GUT8 65 aa3.34□□□□□ -1.87
ITGB1-209ENST00000472147 LINC00862A6NCI5 91 aa3.34□□□□□ -1.87
ITGB1-209ENST00000472147 ZNF727A8MUV8 499 aa3.34□□□□□ -1.87
ITGB1-209ENST00000472147 GATCO43716 136 aaKnown RBP3.34□□□□□ -1.87
ITGB1-209ENST00000472147 BCE1O60756 84 aa3.34□□□□□ -1.87
ITGB1-209ENST00000472147 MRPS36P82909 103 aaKnown RBP3.34□□□□□ -1.87
ITGB1-209ENST00000472147 ASB16-AS1Q495Z4 193 aa3.34□□□□□ -1.87
ITGB1-209ENST00000472147 C9orf129Q5T035 196 aaKnown RBP3.34□□□□□ -1.87
ITGB1-209ENST00000472147 SPAG11AQ6PDA7 123 aa3.34□□□□□ -1.87
ITGB1-209ENST00000472147 PET117Q6UWS5 81 aa3.34□□□□□ -1.87
ITGB1-209ENST00000472147 LINC00304Q8N9R0 145 aa3.34□□□□□ -1.87
ITGB1-209ENST00000472147 C20orf78Q9BR46 151 aa3.34□□□□□ -1.87
ITGB1-209ENST00000472147 TP73-AS1Q9UF72 201 aa3.34□□□□□ -1.87
ITGB1-209ENST00000472147 TRBV24-1A0A075B6N3 115 aa3.33□□□□□ -1.88
ITGB1-209ENST00000472147 IGKV2D-26A0A0A0MRZ7 120 aa3.33□□□□□ -1.88
ITGB1-209ENST00000472147 KANTRA0A1W2PQU2 76 aa3.33□□□□□ -1.88
ITGB1-209ENST00000472147 RPL32P62910 135 aaKnown RBP3.33□□□□□ -1.88
ITGB1-209ENST00000472147 PNRC1Q12796 327 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-209ENST00000472147 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
ITGB1-209ENST00000472147 FP248Q71RG6 208 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-209ENST00000472147 FAM104AQ969W3 186 aa3.33□□□□□ -1.88
ITGB1-209ENST00000472147 RETNLBQ9BQ08 111 aa3.33□□□□□ -1.88
ITGB1-209ENST00000472147 SPANXA1Q9NS26 97 aa3.33□□□□□ -1.88
ITGB1-209ENST00000472147 TGIF2-C20orf24A0A0A6YYL0 155 aa3.32□□□□□ -1.88
ITGB1-209ENST00000472147 K7EN84 100 aa3.32□□□□□ -1.88
ITGB1-209ENST00000472147 CKS1BP61024 79 aa3.32□□□□□ -1.88
ITGB1-209ENST00000472147 SNRPEP62304 92 aaKnown RBP3.32□□□□□ -1.88
ITGB1-209ENST00000472147 HBBP68871 147 aa3.32□□□□□ -1.88
ITGB1-209ENST00000472147 RIGQ13278 110 aa3.32□□□□□ -1.88
ITGB1-209ENST00000472147 KRTAP13-2Q52LG2 175 aa3.32□□□□□ -1.88
ITGB1-209ENST00000472147 C6orf226Q5I0X4 101 aa3.32□□□□□ -1.88
ITGB1-209ENST00000472147 MRPL55Q7Z7F7 128 aaKnown RBP3.32□□□□□ -1.88
ITGB1-209ENST00000472147 PYGO1Q9Y3Y4 419 aa3.32□□□□□ -1.88
ITGB1-209ENST00000472147 A0A1B0GVG6 124 aa3.31□□□□□ -1.88
ITGB1-209ENST00000472147 HIGD1CA8MV81 97 aa3.31□□□□□ -1.88
ITGB1-209ENST00000472147 MT3P25713 68 aa3.31□□□□□ -1.88
ITGB1-209ENST00000472147 C2orf82Q6UX34 121 aa3.31□□□□□ -1.88
ITGB1-209ENST00000472147 Q6ZUT4 128 aa3.31□□□□□ -1.88
ITGB1-209ENST00000472147 AMN1Q8IY45 258 aa3.31□□□□□ -1.88
ITGB1-209ENST00000472147 ANAPC11Q9NYG5 84 aa3.31□□□□□ -1.88
ITGB1-209ENST00000472147 A4D1N5 150 aa3.3□□□□□ -1.88
ITGB1-209ENST00000472147 TMEM250H0YL14 139 aa3.3□□□□□ -1.88
ITGB1-209ENST00000472147 CFC1BP0CG36 223 aa3.3□□□□□ -1.88
ITGB1-209ENST00000472147 FAM104BQ5XKR9 115 aa3.3□□□□□ -1.88
ITGB1-209ENST00000472147 Q6ZN92 141 aa3.3□□□□□ -1.88
ITGB1-209ENST00000472147 LINC00167Q96N53 147 aa3.3□□□□□ -1.88
ITGB1-209ENST00000472147 A0A1B0GW15 77 aa3.29□□□□□ -1.88
ITGB1-209ENST00000472147 SMKR1H3BMG3 65 aa3.29□□□□□ -1.88
ITGB1-209ENST00000472147 CFC1P0CG37 223 aa3.29□□□□□ -1.88
ITGB1-209ENST00000472147 RAB5AP20339 215 aa3.29□□□□□ -1.88
ITGB1-209ENST00000472147 CKS2P33552 79 aa3.29□□□□□ -1.88
ITGB1-209ENST00000472147 RPL39P62891 51 aaKnown RBP3.29□□□□□ -1.88
ITGB1-209ENST00000472147 KRTAP13-3Q3SY46 172 aa3.29□□□□□ -1.88
ITGB1-209ENST00000472147 KRTAP13-1Q8IUC0 172 aa3.29□□□□□ -1.88
ITGB1-209ENST00000472147 ALKBH7Q9BT30 221 aaPredicted RBP3.29□□□□□ -1.88
ITGB1-209ENST00000472147 GNB1LQ9BYB4 327 aa3.29□□□□□ -1.88
ITGB1-209ENST00000472147 XAGE1AQ9HD64 81 aa3.29□□□□□ -1.88
ITGB1-209ENST00000472147 OSTCQ9NRP0 149 aa3.29□□□□□ -1.88
ITGB1-209ENST00000472147 RPL37AP8A6NKH3 93 aa3.28□□□□□ -1.88
ITGB1-209ENST00000472147 SMIM1B2RUZ4 78 aa3.28□□□□□ -1.88
ITGB1-209ENST00000472147 F8VRH5 84 aa3.28□□□□□ -1.88
ITGB1-209ENST00000472147 PPBPP02775 128 aa3.28□□□□□ -1.88
ITGB1-209ENST00000472147 VPREB1P12018 145 aa3.28□□□□□ -1.88
ITGB1-209ENST00000472147 IFI27P40305 119 aaPredicted RBP3.28□□□□□ -1.88
ITGB1-209ENST00000472147 UBE2AP49459 152 aa3.28□□□□□ -1.88
ITGB1-209ENST00000472147 SEC11AP67812 179 aa3.28□□□□□ -1.88
ITGB1-209ENST00000472147 MRPL51Q4U2R6 128 aaKnown RBP3.28□□□□□ -1.88
ITGB1-209ENST00000472147 Q8IZM0 81 aa3.28□□□□□ -1.88
ITGB1-209ENST00000472147 LINC00469Q8N7U9 141 aa3.28□□□□□ -1.88
ITGB1-209ENST00000472147 PLEKHB2Q96CS7 222 aa3.28□□□□□ -1.88
ITGB1-209ENST00000472147 VCX2Q9H322 139 aa3.28□□□□□ -1.88
ITGB1-209ENST00000472147 SMLR1H3BR10 107 aa3.27□□□□□ -1.89
ITGB1-209ENST00000472147 SPINK1P00995 79 aa3.27□□□□□ -1.89
ITGB1-209ENST00000472147 TEX43Q6ZNM6 134 aa3.27□□□□□ -1.89
ITGB1-209ENST00000472147 FAM19A3Q7Z5A8 133 aa3.27□□□□□ -1.89
ITGB1-209ENST00000472147 TMEM141Q96I45 108 aa3.27□□□□□ -1.89
ITGB1-209ENST00000472147 KRTAP4-1Q9BYQ7 146 aa3.27□□□□□ -1.89
ITGB1-209ENST00000472147 EIF5A2Q9GZV4 153 aaKnown RBP3.27□□□□□ -1.89
ITGB1-209ENST00000472147 NAT8BQ9UHF3 227 aa3.27□□□□□ -1.89
ITGB1-209ENST00000472147 F8W036 122 aa3.26□□□□□ -1.89
ITGB1-209ENST00000472147 CXCL5P42830 114 aa3.26□□□□□ -1.89
ITGB1-209ENST00000472147 C2orf66Q6UXQ4 117 aa3.26□□□□□ -1.89
ITGB1-209ENST00000472147 LINC01551Q86U37 167 aa3.26□□□□□ -1.89
ITGB1-209ENST00000472147 AMELXQ99217 191 aa3.26□□□□□ -1.89
ITGB1-209ENST00000472147 C2orf88Q9BSF0 95 aa3.26□□□□□ -1.89
ITGB1-209ENST00000472147 SMIM2Q9BVW6 85 aa3.26□□□□□ -1.89
ITGB1-209ENST00000472147 TOMM7Q9P0U1 55 aa3.26□□□□□ -1.89
ITGB1-209ENST00000472147 IGLV4-3A0A075B6K6 122 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms