RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 MRPL54Q6P161 138 aaKnown RBP10.83□□□□□ -0.68
SORT1-203ENST00000471996 ANAPC16Q96DE5 110 aa10.83□□□□□ -0.68
SORT1-203ENST00000471996 LINC00167Q96N53 147 aa10.83□□□□□ -0.68
SORT1-203ENST00000471996 TNFRSF6BO95407 300 aa10.82□□□□□ -0.68
SORT1-203ENST00000471996 MT-ND4LP03901 98 aa10.81□□□□□ -0.68
SORT1-203ENST00000471996 PRSS2P07478 247 aa10.81□□□□□ -0.68
SORT1-203ENST00000471996 UBE2AP49459 152 aa10.81□□□□□ -0.68
SORT1-203ENST00000471996 CKS1BP61024 79 aa10.81□□□□□ -0.68
SORT1-203ENST00000471996 CLLU1Q5K131 121 aa10.81□□□□□ -0.68
SORT1-203ENST00000471996 FP248Q71RG6 208 aaPredicted RBP10.81□□□□□ -0.68
SORT1-203ENST00000471996 D6R8Y8 96 aa10.8□□□□□ -0.68
SORT1-203ENST00000471996 KRTAP13-3Q3SY46 172 aa10.8□□□□□ -0.68
SORT1-203ENST00000471996 SMIM2Q9BVW6 85 aa10.8□□□□□ -0.68
SORT1-203ENST00000471996 IFI27P40305 119 aaPredicted RBP10.79□□□□□ -0.68
SORT1-203ENST00000471996 C6orf226Q5I0X4 101 aa10.79□□□□□ -0.68
SORT1-203ENST00000471996 ORMDL3Q8N138 153 aa10.79□□□□□ -0.68
SORT1-203ENST00000471996 TOMM7Q9P0U1 55 aa10.79□□□□□ -0.68
SORT1-203ENST00000471996 SEC61BP60468 96 aaKnown RBP10.78□□□□□ -0.68
SORT1-203ENST00000471996 TMEM136Q6ZRR5 245 aa10.78□□□□□ -0.68
SORT1-203ENST00000471996 IGLV4-3A0A075B6K6 122 aa10.77□□□□□ -0.69
SORT1-203ENST00000471996 Q6ZN92 141 aa10.77□□□□□ -0.69
SORT1-203ENST00000471996 LAMTOR2Q9Y2Q5 125 aa10.77□□□□□ -0.69
SORT1-203ENST00000471996 PYGO1Q9Y3Y4 419 aa10.77□□□□□ -0.69
SORT1-203ENST00000471996 GAGE10A6NGK3 116 aa10.76□□□□□ -0.69
SORT1-203ENST00000471996 PRSS47A8MTI9 375 aa10.76□□□□□ -0.69
SORT1-203ENST00000471996 NPYP01303 97 aa10.76□□□□□ -0.69
SORT1-203ENST00000471996 UQCC3Q6UW78 93 aa10.76□□□□□ -0.69
SORT1-203ENST00000471996 Q8IZM0 81 aa10.76□□□□□ -0.69
SORT1-203ENST00000471996 TMEM141Q96I45 108 aa10.76□□□□□ -0.69
SORT1-203ENST00000471996 LCE2CQ5TA81 110 aa10.75□□□□□ -0.69
SORT1-203ENST00000471996 SPAG11AQ6PDA7 123 aa10.75□□□□□ -0.69
SORT1-203ENST00000471996 PRELID3AQ96N28 172 aa10.75□□□□□ -0.69
SORT1-203ENST00000471996 RAB5AP20339 215 aa10.74□□□□□ -0.69
SORT1-203ENST00000471996 C3orf22Q8N5N4 141 aa10.74□□□□□ -0.69
SORT1-203ENST00000471996 ALKBH7Q9BT30 221 aaPredicted RBP10.74□□□□□ -0.69
SORT1-203ENST00000471996 F8VRH5 84 aa10.73□□□□□ -0.69
SORT1-203ENST00000471996 TEX43Q6ZNM6 134 aa10.73□□□□□ -0.69
SORT1-203ENST00000471996 C2orf88Q9BSF0 95 aa10.71□□□□□ -0.69
SORT1-203ENST00000471996 MAP1LC3AQ9H492 121 aa10.71□□□□□ -0.69
SORT1-203ENST00000471996 IGLV5-37A0A075B6J1 123 aa10.7□□□□□ -0.7
SORT1-203ENST00000471996 TMEM218A2RU14 115 aa10.7□□□□□ -0.7
SORT1-203ENST00000471996 K7EMI3 77 aa10.7□□□□□ -0.7
SORT1-203ENST00000471996 ZC2HC1BQ5TFG8 222 aa10.7□□□□□ -0.7
SORT1-203ENST00000471996 PRLHP81277 87 aa10.69□□□□□ -0.7
SORT1-203ENST00000471996 IFITM2Q01629 132 aa10.69□□□□□ -0.7
SORT1-203ENST00000471996 TRAV9-1A0A075B6T8 112 aa10.68□□□□□ -0.7
SORT1-203ENST00000471996 Q8N8P6 123 aa10.68□□□□□ -0.7
SORT1-203ENST00000471996 CFC1BP0CG36 223 aa10.67□□□□□ -0.7
SORT1-203ENST00000471996 NKAPP1Q8N9T2 125 aa10.67□□□□□ -0.7
SORT1-203ENST00000471996 PLEKHB2Q96CS7 222 aa10.67□□□□□ -0.7
SORT1-203ENST00000471996 AMELXQ99217 191 aa10.67□□□□□ -0.7
SORT1-203ENST00000471996 SEC11CQ9BY50 192 aa10.67□□□□□ -0.7
SORT1-203ENST00000471996 IGKV2-28A0A075B6P5 120 aa10.66□□□□□ -0.7
SORT1-203ENST00000471996 IGKV2D-28P01615 120 aa10.66□□□□□ -0.7
SORT1-203ENST00000471996 G0S2P27469 103 aa10.66□□□□□ -0.7
SORT1-203ENST00000471996 CXCL5P42830 114 aa10.66□□□□□ -0.7
SORT1-203ENST00000471996 MT1HP80294 61 aa10.66□□□□□ -0.7
SORT1-203ENST00000471996 ORMDL2Q53FV1 153 aa10.66□□□□□ -0.7
SORT1-203ENST00000471996 C4orf48Q5BLP8 95 aa10.66□□□□□ -0.7
SORT1-203ENST00000471996 FAM19A3Q7Z5A8 133 aa10.66□□□□□ -0.7
SORT1-203ENST00000471996 LOC389332A0A1B0GUA5 103 aa10.65□□□□□ -0.7
SORT1-203ENST00000471996 NPSP0C0P6 89 aa10.65□□□□□ -0.7
SORT1-203ENST00000471996 ADCYAP1P18509 176 aa10.65□□□□□ -0.7
SORT1-203ENST00000471996 FAM19A1Q7Z5A9 133 aa10.65□□□□□ -0.7
SORT1-203ENST00000471996 KRTAP19-2Q3LHN2 52 aa10.64□□□□□ -0.71
SORT1-203ENST00000471996 C2orf66Q6UXQ4 117 aa10.64□□□□□ -0.71
SORT1-203ENST00000471996 VCX2Q9H322 139 aa10.64□□□□□ -0.71
SORT1-203ENST00000471996 NXT2Q9NPJ8 142 aaKnown RBP10.64□□□□□ -0.71
SORT1-203ENST00000471996 CYSLTR1Q9Y271 337 aa10.64□□□□□ -0.71
SORT1-203ENST00000471996 SCO1O75880 301 aa10.63□□□□□ -0.71
SORT1-203ENST00000471996 CDKN2A-AS1Q9UH64 79 aa10.63□□□□□ -0.71
SORT1-203ENST00000471996 S100PP25815 95 aa10.62□□□□□ -0.71
SORT1-203ENST00000471996 HERVK_113P63121 156 aa10.61□□□□□ -0.71
SORT1-203ENST00000471996 COX19Q49B96 90 aa10.61□□□□□ -0.71
SORT1-203ENST00000471996 TMEM126AQ9H061 195 aa10.61□□□□□ -0.71
SORT1-203ENST00000471996 LORP23490 312 aaPredicted RBP10.6□□□□□ -0.71
SORT1-203ENST00000471996 PAPPA-AS1Q5QFB9 102 aa10.6□□□□□ -0.71
SORT1-203ENST00000471996 GNB1LQ9BYB4 327 aa10.6□□□□□ -0.71
SORT1-203ENST00000471996 TMEM238C9JI98 176 aa10.59□□□□□ -0.71
SORT1-203ENST00000471996 SEC11AP67812 179 aa10.59□□□□□ -0.71
SORT1-203ENST00000471996 C10orf91Q5T1B1 145 aa10.59□□□□□ -0.71
SORT1-203ENST00000471996 COMMD7Q86VX2 200 aa10.59□□□□□ -0.71
SORT1-203ENST00000471996 CBLN2Q8IUK8 224 aa10.59□□□□□ -0.71
SORT1-203ENST00000471996 KRTAP9-7A8MTY7 169 aa10.58□□□□□ -0.72
SORT1-203ENST00000471996 RAB5BP61020 215 aa10.58□□□□□ -0.72
SORT1-203ENST00000471996 XP32Q5T750 250 aa10.58□□□□□ -0.72
SORT1-203ENST00000471996 DAND5Q8N907 189 aa10.58□□□□□ -0.72
SORT1-203ENST00000471996 LINC01549A6NIU2 74 aa10.57□□□□□ -0.72
SORT1-203ENST00000471996 Q8NBF4 154 aa10.57□□□□□ -0.72
SORT1-203ENST00000471996 GEMIN7Q9H840 131 aaKnown RBP10.57□□□□□ -0.72
SORT1-203ENST00000471996 IGIPA6NJ69 53 aa10.56□□□□□ -0.72
SORT1-203ENST00000471996 M0R378 163 aa10.56□□□□□ -0.72
SORT1-203ENST00000471996 SPINK1P00995 79 aa10.56□□□□□ -0.72
SORT1-203ENST00000471996 KRTAP10-6P60371 365 aaPredicted RBP10.56□□□□□ -0.72
SORT1-203ENST00000471996 RHEBQ15382 184 aa10.56□□□□□ -0.72
SORT1-203ENST00000471996 SPRR4Q96PI1 79 aa10.56□□□□□ -0.72
SORT1-203ENST00000471996 SMIM1B2RUZ4 78 aa10.55□□□□□ -0.72
SORT1-203ENST00000471996 KIAA1644Q3SXP7 199 aa10.55□□□□□ -0.72
SORT1-203ENST00000471996 COX7B2Q8TF08 81 aa10.55□□□□□ -0.72
SORT1-203ENST00000471996 TIMM17AQ99595 171 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms