RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 C14orf177Q52M58 125 aa12.51□□□□□ -0.41
PSPC1-203ENST00000471658 SPATA45Q537H7 98 aa12.51□□□□□ -0.41
PSPC1-203ENST00000471658 LGALS3P17931 250 aaKnown RBP12.5□□□□□ -0.41
PSPC1-203ENST00000471658 CKS1BP61024 79 aa12.5□□□□□ -0.41
PSPC1-203ENST00000471658 Q6ZRU5 148 aa12.5□□□□□ -0.41
PSPC1-203ENST00000471658 PCP2Q8IVA1 136 aa12.5□□□□□ -0.41
PSPC1-203ENST00000471658 C2orf48Q96LS8 159 aa12.5□□□□□ -0.41
PSPC1-203ENST00000471658 CAMK2N2Q96S95 79 aa12.5□□□□□ -0.41
PSPC1-203ENST00000471658 SMIM6P0DI80 62 aa12.49□□□□□ -0.41
PSPC1-203ENST00000471658 NDUFA12Q9UI09 145 aa12.49□□□□□ -0.41
PSPC1-203ENST00000471658 ZNF625Q96I27 306 aaPredicted RBP12.48□□□□□ -0.41
PSPC1-203ENST00000471658 PKD1P98161 4303 aa12.48□□□□□ -0.41
PSPC1-203ENST00000471658 SYCNQ0VAF6 134 aa12.48□□□□□ -0.41
PSPC1-203ENST00000471658 NDUFA1O15239 70 aa12.47□□□□□ -0.41
PSPC1-203ENST00000471658 LINC00336Q6ZUF6 198 aa12.47□□□□□ -0.41
PSPC1-203ENST00000471658 TP73-AS1Q9UF72 201 aa12.47□□□□□ -0.41
PSPC1-203ENST00000471658 EREGO14944 169 aa12.46□□□□□ -0.41
PSPC1-203ENST00000471658 KRTAP10-2P60368 255 aa12.46□□□□□ -0.41
PSPC1-203ENST00000471658 C9orf116Q5BN46 136 aaPredicted RBP12.46□□□□□ -0.41
PSPC1-203ENST00000471658 C6orf48Q9UBA6 75 aa12.46□□□□□ -0.41
PSPC1-203ENST00000471658 C14orf144Q96I85 54 aa12.45□□□□□ -0.42
PSPC1-203ENST00000471658 DNAH5Q8TE73 4624 aa12.45□□□□□ -0.42
PSPC1-203ENST00000471658 ZNF815PA8K554 130 aa12.44□□□□□ -0.42
PSPC1-203ENST00000471658 CXCL5P42830 114 aa12.44□□□□□ -0.42
PSPC1-203ENST00000471658 CNBPP62633 177 aaKnown RBP12.44□□□□□ -0.42
PSPC1-203ENST00000471658 CARD19Q96LW7 228 aa12.44□□□□□ -0.42
PSPC1-203ENST00000471658 MYMXA0A1B0GTQ4 84 aa12.44□□□□□ -0.42
PSPC1-203ENST00000471658 S100A12P80511 92 aa12.44□□□□□ -0.42
PSPC1-203ENST00000471658 LINC01620Q4KN68 170 aa12.44□□□□□ -0.42
PSPC1-203ENST00000471658 HECTD4Q9Y4D8 3996 aa12.43□□□□□ -0.42
PSPC1-203ENST00000471658 C12orf57Q99622 126 aa12.43□□□□□ -0.42
PSPC1-203ENST00000471658 F8WDY8 70 aa12.42□□□□□ -0.42
PSPC1-203ENST00000471658 COX8AP10176 69 aa12.41□□□□□ -0.42
PSPC1-203ENST00000471658 LINC00518Q8N0U6 118 aa12.4□□□□□ -0.42
PSPC1-203ENST00000471658 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.4□□□□□ -0.42
PSPC1-203ENST00000471658 A0A0J9YXY3 114 aa12.4□□□□□ -0.42
PSPC1-203ENST00000471658 A0A0U1RRA0 63 aa12.4□□□□□ -0.42
PSPC1-203ENST00000471658 A0A1B0GVY2 172 aa12.4□□□□□ -0.42
PSPC1-203ENST00000471658 IGLV5-52A0A0A0MRZ9 124 aa12.39□□□□□ -0.43
PSPC1-203ENST00000471658 TRBV30A0A0K0K1B3 111 aa12.39□□□□□ -0.43
PSPC1-203ENST00000471658 PFN2P35080 140 aa12.39□□□□□ -0.43
PSPC1-203ENST00000471658 HERV-K104P63124 156 aa12.39□□□□□ -0.43
PSPC1-203ENST00000471658 C9orf163Q8N9P6 203 aa12.39□□□□□ -0.43
PSPC1-203ENST00000471658 BOD1L2Q8IYS8 172 aa12.38□□□□□ -0.43
PSPC1-203ENST00000471658 PRO1933Q9H354 126 aa12.38□□□□□ -0.43
PSPC1-203ENST00000471658 SMIM13P0DJ93 91 aa12.37□□□□□ -0.43
PSPC1-203ENST00000471658 RNF151Q2KHN1 245 aa12.37□□□□□ -0.43
PSPC1-203ENST00000471658 MEIG1Q5JSS6 88 aa12.37□□□□□ -0.43
PSPC1-203ENST00000471658 SFTA2Q6UW10 78 aa12.37□□□□□ -0.43
PSPC1-203ENST00000471658 ERG28Q9UKR5 140 aa12.37□□□□□ -0.43
PSPC1-203ENST00000471658 PGPEP1Q9NXJ5 209 aa12.36□□□□□ -0.43
PSPC1-203ENST00000471658 SLC25A34Q6PIV7 304 aa12.35□□□□□ -0.43
PSPC1-203ENST00000471658 SCGB1D4Q6XE38 83 aa12.35□□□□□ -0.43
PSPC1-203ENST00000471658 LINC00158P58513 81 aa12.34□□□□□ -0.43
PSPC1-203ENST00000471658 ADAMTSL4-AS1Q5T5F5 129 aa12.34□□□□□ -0.43
PSPC1-203ENST00000471658 DLEU1O43261 78 aa12.33□□□□□ -0.43
PSPC1-203ENST00000471658 Q6ZRP5 223 aa12.33□□□□□ -0.43
PSPC1-203ENST00000471658 DAND5Q8N907 189 aa12.33□□□□□ -0.43
PSPC1-203ENST00000471658 LITAFQ99732 161 aa12.33□□□□□ -0.43
PSPC1-203ENST00000471658 SDIM1Q6ZPB5 146 aa12.33□□□□□ -0.44
PSPC1-203ENST00000471658 NDUFC2-KCTD14E9PQ53 114 aa12.32□□□□□ -0.44
PSPC1-203ENST00000471658 RPL18AQ02543 176 aaKnown RBP12.32□□□□□ -0.44
PSPC1-203ENST00000471658 DYNC1H1Q14204 4646 aaKnown RBP12.32□□□□□ -0.44
PSPC1-203ENST00000471658 LOC107984640A0A0U1RRK4 108 aa12.31□□□□□ -0.44
PSPC1-203ENST00000471658 GAGE2BQ13066 116 aa12.31□□□□□ -0.44
PSPC1-203ENST00000471658 GAGE2EQ4V326 116 aa12.31□□□□□ -0.44
PSPC1-203ENST00000471658 GAGE2DQ9UEU5 116 aa12.31□□□□□ -0.44
PSPC1-203ENST00000471658 TLX1NBP0CAT3 122 aa12.3□□□□□ -0.44
PSPC1-203ENST00000471658 MIR7-3HGQ8N6C7 128 aa12.3□□□□□ -0.44
PSPC1-203ENST00000471658 A0A096LNI7 61 aa12.29□□□□□ -0.44
PSPC1-203ENST00000471658 COX17Q14061 63 aa12.29□□□□□ -0.44
PSPC1-203ENST00000471658 C2orf91Q6ZV80 131 aa12.29□□□□□ -0.44
PSPC1-203ENST00000471658 CHTF8P0CG12 524 aa12.29□□□□□ -0.44
PSPC1-203ENST00000471658 GCSHP23434 173 aa12.29□□□□□ -0.44
PSPC1-203ENST00000471658 CIRBPQ14011 172 aaKnown RBP12.29□□□□□ -0.44
PSPC1-203ENST00000471658 XAGE1AQ9HD64 81 aa12.29□□□□□ -0.44
PSPC1-203ENST00000471658 PKHD1P08F94 4074 aa12.28□□□□□ -0.44
PSPC1-203ENST00000471658 DNAH8Q96JB1 4490 aa12.28□□□□□ -0.44
PSPC1-203ENST00000471658 IGKV2-24A0A0C4DH68 120 aa12.28□□□□□ -0.44
PSPC1-203ENST00000471658 LINC00587B1AMM8 73 aa12.28□□□□□ -0.44
PSPC1-203ENST00000471658 PANO1I0J062 215 aa12.28□□□□□ -0.44
PSPC1-203ENST00000471658 TIMM17BO60830 172 aa12.28□□□□□ -0.44
PSPC1-203ENST00000471658 KRTAP10-1P60331 282 aa12.28□□□□□ -0.44
PSPC1-203ENST00000471658 NPC2P61916 151 aa12.28□□□□□ -0.44
PSPC1-203ENST00000471658 UQCR10Q9UDW1 63 aa12.28□□□□□ -0.44
PSPC1-203ENST00000471658 EIF4EBP3O60516 100 aaPredicted RBP12.27□□□□□ -0.44
PSPC1-203ENST00000471658 SND1-IT1Q9HBX3 110 aa12.27□□□□□ -0.44
PSPC1-203ENST00000471658 LRP1BQ9NZR2 4599 aa12.26□□□□□ -0.45
PSPC1-203ENST00000471658 PTTG1IPP53801 180 aa12.26□□□□□ -0.45
PSPC1-203ENST00000471658 C9orf129Q5T035 196 aaKnown RBP12.26□□□□□ -0.45
PSPC1-203ENST00000471658 MIEN1Q9BRT3 115 aa12.26□□□□□ -0.45
PSPC1-203ENST00000471658 C16orf90A8MZG2 172 aa12.25□□□□□ -0.45
PSPC1-203ENST00000471658 SOSTDC1Q6X4U4 206 aa12.25□□□□□ -0.45
PSPC1-203ENST00000471658 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.25□□□□□ -0.45
PSPC1-203ENST00000471658 TMEM238C9JI98 176 aa12.24□□□□□ -0.45
PSPC1-203ENST00000471658 SPANXDQ9BXN6 97 aa12.23□□□□□ -0.45
PSPC1-203ENST00000471658 SPANXCQ9NY87 97 aa12.23□□□□□ -0.45
PSPC1-203ENST00000471658 FAM30AQ9NZY2 134 aa12.23□□□□□ -0.45
PSPC1-203ENST00000471658 HIGD1BQ9P298 99 aa12.23□□□□□ -0.45
PSPC1-203ENST00000471658 EPPK1P58107 5090 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms