RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 LHFPL1Q86WI0 220 aa0.82□□□□□ -2.28
ITGA6-209ENST00000470259 Q8IYB0 196 aa0.82□□□□□ -2.28
ITGA6-209ENST00000470259 TCTE3Q8IZS6 198 aa0.82□□□□□ -2.28
ITGA6-209ENST00000470259 OR5A1Q8NGJ0 315 aa0.82□□□□□ -2.28
ITGA6-209ENST00000470259 OR51A4Q8NGJ6 313 aa0.82□□□□□ -2.28
ITGA6-209ENST00000470259 BRK1Q8WUW1 75 aa0.82□□□□□ -2.28
ITGA6-209ENST00000470259 CANT1Q8WVQ1 401 aa0.82□□□□□ -2.28
ITGA6-209ENST00000470259 CARD19Q96LW7 228 aa0.82□□□□□ -2.28
ITGA6-209ENST00000470259 YPEL2Q96QA6 119 aa0.82□□□□□ -2.28
ITGA6-209ENST00000470259 CGREF1Q99674 301 aa0.82□□□□□ -2.28
ITGA6-209ENST00000470259 MRPL32Q9BYC8 188 aaKnown RBP0.82□□□□□ -2.28
ITGA6-209ENST00000470259 SMIM3Q9BZL3 60 aa0.82□□□□□ -2.28
ITGA6-209ENST00000470259 TPT1P8Q9HAU6 139 aa0.82□□□□□ -2.28
ITGA6-209ENST00000470259 OTORQ9NRC9 128 aa0.82□□□□□ -2.28
ITGA6-209ENST00000470259 TXNL4BQ9NX01 149 aaKnown RBP0.82□□□□□ -2.28
ITGA6-209ENST00000470259 HIGD1AQ9Y241 93 aa0.82□□□□□ -2.28
ITGA6-209ENST00000470259 TIMM9Q9Y5J7 89 aa0.82□□□□□ -2.28
ITGA6-209ENST00000470259 TRAV12-2A0A075B6T6 113 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 TRAV7A0A075B6U4 112 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 A0A0J9YX75 114 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 LOC107984640A0A0U1RRK4 108 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 MEIS3P1A6NDR6 274 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 LINC00587B1AMM8 73 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 J3QQQ9 107 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 HMGN4O00479 90 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 GNRH2O43555 120 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 HIST1H2BKO60814 126 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 APOC1P02654 83 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 CRPP02741 224 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 HIST1H2BJP06899 126 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 S100A1P23297 94 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 NFYAP23511 347 aaPredicted RBP0.81□□□□□ -2.28
ITGA6-209ENST00000470259 RNASE4P34096 147 aaKnown RBP0.81□□□□□ -2.28
ITGA6-209ENST00000470259 RPL35P42766 123 aaKnown RBP0.81□□□□□ -2.28
ITGA6-209ENST00000470259 RAB5CP51148 216 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 RPS28P62857 69 aaKnown RBP0.81□□□□□ -2.28
ITGA6-209ENST00000470259 HBBP68871 147 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 PRCDQ00LT1 54 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 MYL5Q02045 173 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 HIST1H1AQ02539 215 aaPredicted RBP0.81□□□□□ -2.28
ITGA6-209ENST00000470259 ELOBQ15370 118 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 NEDD8Q15843 81 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 MORN2Q502X0 79 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 ZNF833PQ6ZTB9 187 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 LINC00305Q7Z4B0 112 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 PFN4Q8NHR9 129 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 PRADC1Q9BSG0 188 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 NPCDR1Q9BY65 106 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 LPAR5Q9H1C0 372 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 CALML5Q9NZT1 146 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 NAT8BQ9UHF3 227 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 EPDR1Q9UM22 224 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 U3KQ87 197 aa0.81□□□□□ -2.28
ITGA6-209ENST00000470259 TRAV13-1A0A0B4J241 112 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 IGHV1-58A0A0C4DH39 117 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 TRBV7-6A0A0J9YX20 115 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 TRBV10-2A0A0K0K1G8 114 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 C7orf71A4D174 169 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 H7C2G1 150 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 J3QR89 54 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 K7ERU9 68 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 TPST1O60507 370 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 TIMM17BO60830 172 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 PGLYRP1O75594 196 aaPredicted RBP0.8□□□□□ -2.28
ITGA6-209ENST00000470259 TCL1BO95988 128 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 MT-ND4LP03901 98 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 SHBGP04278 402 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 SAA2P0DJI9 122 aaPredicted RBP0.8□□□□□ -2.28
ITGA6-209ENST00000470259 HINT1P49773 126 aaPredicted RBP0.8□□□□□ -2.28
ITGA6-209ENST00000470259 DNAJB13P59910 316 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 RRAS2P62070 204 aaPredicted RBP0.8□□□□□ -2.28
ITGA6-209ENST00000470259 NCS1P62166 190 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 NDUFA5Q16718 116 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 WHAMMP3Q1A5X7 153 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 Q5XG85 94 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 LYZL1Q6UWQ5 148 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 PHF5AQ7RTV0 110 aaKnown RBP0.8□□□□□ -2.28
ITGA6-209ENST00000470259 FAM19A2Q8N3H0 131 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 OR5H6Q8NGV6 325 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 OR4K15Q8NH41 348 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 TMEM203Q969S6 136 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 BANF2Q9H503 90 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 OR5AC2Q9NZP5 309 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 TNFSF18Q9UNG2 199 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 BAIAP2Q9UQB8 552 aa0.8□□□□□ -2.28
ITGA6-209ENST00000470259 A0A0G2JQZ4 141 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 CPSF4LA6NMK7 179 aaKnown RBP0.79□□□□□ -2.28
ITGA6-209ENST00000470259 HMSDA8MTL9 139 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 FAM25AB3EWG3 89 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 FAM25CB3EWG5 89 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 FAM25GB3EWG6 89 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 DLEU1O43261 78 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 GNG7O60262 68 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 SMIM24O75264 130 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 MT1BP07438 61 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 TRGC1P0CF51 173 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 MGST1P10620 155 aaKnown RBP0.79□□□□□ -2.28
ITGA6-209ENST00000470259 RPS27P42677 84 aaKnown RBP0.79□□□□□ -2.28
ITGA6-209ENST00000470259 FXYD2P54710 66 aa0.79□□□□□ -2.28
ITGA6-209ENST00000470259 TMEM258P61165 79 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms