RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 J3QQQ9 107 aa7.3□□□□□ -1.24
SREBF1-209ENST00000470247 FUSP35637 526 aaKnown RBP eCLIP7.3□□□□□ -1.24
SREBF1-209ENST00000470247 CNBPP62633 177 aaKnown RBP7.3□□□□□ -1.24
SREBF1-209ENST00000470247 Q6ZRU5 148 aa7.3□□□□□ -1.24
SREBF1-209ENST00000470247 TTTY13Q9BZ97 58 aa7.3□□□□□ -1.24
SREBF1-209ENST00000470247 RYR3Q15413 4870 aa7.29□□□□□ -1.24
SREBF1-209ENST00000470247 F8WDY8 70 aa7.29□□□□□ -1.24
SREBF1-209ENST00000470247 PRSS2P07478 247 aa7.29□□□□□ -1.24
SREBF1-209ENST00000470247 C6orf48Q9UBA6 75 aa7.29□□□□□ -1.24
SREBF1-209ENST00000470247 NDUFA1O15239 70 aa7.28□□□□□ -1.24
SREBF1-209ENST00000470247 CXCL5P42830 114 aa7.28□□□□□ -1.24
SREBF1-209ENST00000470247 SYCNQ0VAF6 134 aa7.28□□□□□ -1.24
SREBF1-209ENST00000470247 PCP2Q8IVA1 136 aa7.28□□□□□ -1.24
SREBF1-209ENST00000470247 CAMK2N2Q96S95 79 aa7.28□□□□□ -1.24
SREBF1-209ENST00000470247 NDUFA12Q9UI09 145 aa7.28□□□□□ -1.24
SREBF1-209ENST00000470247 HSBP1L1C9JCN9 74 aa7.27□□□□□ -1.25
SREBF1-209ENST00000470247 EREGO14944 169 aa7.27□□□□□ -1.25
SREBF1-209ENST00000470247 CKS1BP61024 79 aa7.27□□□□□ -1.25
SREBF1-209ENST00000470247 VAMP8Q9BV40 100 aa7.27□□□□□ -1.25
SREBF1-209ENST00000470247 PAM16Q9Y3D7 125 aa7.27□□□□□ -1.25
SREBF1-209ENST00000470247 SMIM6P0DI80 62 aa7.26□□□□□ -1.25
SREBF1-209ENST00000470247 LGALS3P17931 250 aaKnown RBP7.26□□□□□ -1.25
SREBF1-209ENST00000470247 NMUP48645 174 aa7.26□□□□□ -1.25
SREBF1-209ENST00000470247 RNF151Q2KHN1 245 aa7.26□□□□□ -1.25
SREBF1-209ENST00000470247 SPATA45Q537H7 98 aa7.26□□□□□ -1.25
SREBF1-209ENST00000470247 C9orf116Q5BN46 136 aaPredicted RBP7.26□□□□□ -1.25
SREBF1-209ENST00000470247 C9orf163Q8N9P6 203 aa7.26□□□□□ -1.25
SREBF1-209ENST00000470247 CARD19Q96LW7 228 aa7.26□□□□□ -1.25
SREBF1-209ENST00000470247 PKD1P98161 4303 aa7.26□□□□□ -1.25
SREBF1-209ENST00000470247 TRBV30A0A0K0K1B3 111 aa7.25□□□□□ -1.25
SREBF1-209ENST00000470247 LINC01620Q4KN68 170 aa7.25□□□□□ -1.25
SREBF1-209ENST00000470247 PGPEP1Q9NXJ5 209 aa7.25□□□□□ -1.25
SREBF1-209ENST00000470247 MYMXA0A1B0GTQ4 84 aa7.24□□□□□ -1.25
SREBF1-209ENST00000470247 SDIM1Q6ZPB5 146 aa7.24□□□□□ -1.25
SREBF1-209ENST00000470247 TP73-AS1Q9UF72 201 aa7.24□□□□□ -1.25
SREBF1-209ENST00000470247 IGLV5-52A0A0A0MRZ9 124 aa7.23□□□□□ -1.25
SREBF1-209ENST00000470247 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.23□□□□□ -1.25
SREBF1-209ENST00000470247 A0A0J9YXY3 114 aa7.23□□□□□ -1.25
SREBF1-209ENST00000470247 ZNF815PA8K554 130 aa7.23□□□□□ -1.25
SREBF1-209ENST00000470247 TLX1NBP0CAT3 122 aa7.23□□□□□ -1.25
SREBF1-209ENST00000470247 COX8AP10176 69 aa7.23□□□□□ -1.25
SREBF1-209ENST00000470247 HERV-K104P63124 156 aa7.23□□□□□ -1.25
SREBF1-209ENST00000470247 SFTA2Q6UW10 78 aa7.23□□□□□ -1.25
SREBF1-209ENST00000470247 BOD1L2Q8IYS8 172 aa7.23□□□□□ -1.25
SREBF1-209ENST00000470247 C14orf144Q96I85 54 aa7.23□□□□□ -1.25
SREBF1-209ENST00000470247 DNAH5Q8TE73 4624 aa7.22□□□□□ -1.25
SREBF1-209ENST00000470247 DLEU1O43261 78 aa7.22□□□□□ -1.25
SREBF1-209ENST00000470247 LITAFQ99732 161 aa7.22□□□□□ -1.25
SREBF1-209ENST00000470247 ERG28Q9UKR5 140 aa7.22□□□□□ -1.25
SREBF1-209ENST00000470247 SMIM13P0DJ93 91 aa7.21□□□□□ -1.26
SREBF1-209ENST00000470247 Q6ZRP5 223 aa7.21□□□□□ -1.26
SREBF1-209ENST00000470247 LINC00518Q8N0U6 118 aa7.21□□□□□ -1.26
SREBF1-209ENST00000470247 C12orf57Q99622 126 aa7.21□□□□□ -1.26
SREBF1-209ENST00000470247 PFN2P35080 140 aa7.2□□□□□ -1.26
SREBF1-209ENST00000470247 KRTAP10-1P60331 282 aa7.2□□□□□ -1.26
SREBF1-209ENST00000470247 S100A12P80511 92 aa7.2□□□□□ -1.26
SREBF1-209ENST00000470247 ADAMTSL4-AS1Q5T5F5 129 aa7.2□□□□□ -1.26
SREBF1-209ENST00000470247 HECTD4Q9Y4D8 3996 aa7.2□□□□□ -1.26
SREBF1-209ENST00000470247 A0A0U1RRA0 63 aa7.19□□□□□ -1.26
SREBF1-209ENST00000470247 LOC107984640A0A0U1RRK4 108 aa7.19□□□□□ -1.26
SREBF1-209ENST00000470247 NDUFC2-KCTD14E9PQ53 114 aa7.19□□□□□ -1.26
SREBF1-209ENST00000470247 PANO1I0J062 215 aa7.19□□□□□ -1.26
SREBF1-209ENST00000470247 GCSHP23434 173 aa7.19□□□□□ -1.26
SREBF1-209ENST00000470247 COX17Q14061 63 aa7.19□□□□□ -1.26
SREBF1-209ENST00000470247 A0A096LNI7 61 aa7.18□□□□□ -1.26
SREBF1-209ENST00000470247 C16orf90A8MZG2 172 aa7.18□□□□□ -1.26
SREBF1-209ENST00000470247 TIMM17BO60830 172 aa7.18□□□□□ -1.26
SREBF1-209ENST00000470247 LINC00158P58513 81 aa7.18□□□□□ -1.26
SREBF1-209ENST00000470247 MEIG1Q5JSS6 88 aa7.18□□□□□ -1.26
SREBF1-209ENST00000470247 SLC25A34Q6PIV7 304 aa7.18□□□□□ -1.26
SREBF1-209ENST00000470247 FAM30AQ9NZY2 134 aa7.18□□□□□ -1.26
SREBF1-209ENST00000470247 PKHD1P08F94 4074 aa7.17□□□□□ -1.26
SREBF1-209ENST00000470247 DYNC1H1Q14204 4646 aaKnown RBP7.17□□□□□ -1.26
SREBF1-209ENST00000470247 LINC00587B1AMM8 73 aa7.17□□□□□ -1.26
SREBF1-209ENST00000470247 EIF4EBP3O60516 100 aaPredicted RBP7.17□□□□□ -1.26
SREBF1-209ENST00000470247 CHTF8P0CG12 524 aa7.17□□□□□ -1.26
SREBF1-209ENST00000470247 PTTG1IPP53801 180 aa7.17□□□□□ -1.26
SREBF1-209ENST00000470247 GAGE2BQ13066 116 aa7.17□□□□□ -1.26
SREBF1-209ENST00000470247 GAGE2EQ4V326 116 aa7.17□□□□□ -1.26
SREBF1-209ENST00000470247 C9orf129Q5T035 196 aaKnown RBP7.17□□□□□ -1.26
SREBF1-209ENST00000470247 C2orf91Q6ZV80 131 aa7.17□□□□□ -1.26
SREBF1-209ENST00000470247 MIR7-3HGQ8N6C7 128 aa7.17□□□□□ -1.26
SREBF1-209ENST00000470247 DAND5Q8N907 189 aa7.17□□□□□ -1.26
SREBF1-209ENST00000470247 PRO1933Q9H354 126 aa7.17□□□□□ -1.26
SREBF1-209ENST00000470247 GAGE2DQ9UEU5 116 aa7.17□□□□□ -1.26
SREBF1-209ENST00000470247 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.17□□□□□ -1.26
SREBF1-209ENST00000470247 LRP1BQ9NZR2 4599 aa7.17□□□□□ -1.26
SREBF1-209ENST00000470247 DNAH8Q96JB1 4490 aa7.16□□□□□ -1.26
SREBF1-209ENST00000470247 RPL18AQ02543 176 aaKnown RBP7.16□□□□□ -1.26
SREBF1-209ENST00000470247 CIRBPQ14011 172 aaKnown RBP7.16□□□□□ -1.26
SREBF1-209ENST00000470247 SOSTDC1Q6X4U4 206 aa7.16□□□□□ -1.26
SREBF1-209ENST00000470247 SCGB1D4Q6XE38 83 aa7.16□□□□□ -1.26
SREBF1-209ENST00000470247 KRTAP7-1Q8IUC3 87 aa7.16□□□□□ -1.26
SREBF1-209ENST00000470247 SND1-IT1Q9HBX3 110 aa7.16□□□□□ -1.26
SREBF1-209ENST00000470247 XAGE1AQ9HD64 81 aa7.16□□□□□ -1.26
SREBF1-209ENST00000470247 LOC107984156A0A0G2JMH3 177 aa7.15□□□□□ -1.26
SREBF1-209ENST00000470247 Q6ZSA8 131 aa7.15□□□□□ -1.26
SREBF1-209ENST00000470247 ARL17AQ8IVW1 177 aa7.15□□□□□ -1.26
SREBF1-209ENST00000470247 HIGD1BQ9P298 99 aa7.15□□□□□ -1.26
SREBF1-209ENST00000470247 IGKV2-24A0A0C4DH68 120 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 206.1 ms