RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 HIST1H2BMQ99879 126 aa10.23□□□□□ -0.77
GTF3C2-209ENST00000470115 A0A1W2PNN7 141 aa10.21□□□□□ -0.77
GTF3C2-209ENST00000470115 MT1HL1P0DM35 61 aa10.21□□□□□ -0.77
GTF3C2-209ENST00000470115 RPL18AQ02543 176 aaKnown RBP10.21□□□□□ -0.77
GTF3C2-209ENST00000470115 RNF151Q2KHN1 245 aa10.21□□□□□ -0.77
GTF3C2-209ENST00000470115 LINC00173Q6ZV60 143 aa10.21□□□□□ -0.77
GTF3C2-209ENST00000470115 AMELXQ99217 191 aa10.21□□□□□ -0.77
GTF3C2-209ENST00000470115 ATP5LO75964 103 aa10.2□□□□□ -0.78
GTF3C2-209ENST00000470115 LINC00242Q5T6M2 205 aa10.2□□□□□ -0.78
GTF3C2-209ENST00000470115 A0A087WZ39 114 aa10.19□□□□□ -0.78
GTF3C2-209ENST00000470115 F8WDY8 70 aa10.19□□□□□ -0.78
GTF3C2-209ENST00000470115 UBE2D1P51668 147 aa10.19□□□□□ -0.78
GTF3C2-209ENST00000470115 PMVKQ15126 192 aa10.19□□□□□ -0.78
GTF3C2-209ENST00000470115 PDZD11Q5EBL8 140 aa10.19□□□□□ -0.78
GTF3C2-209ENST00000470115 C10orf25Q5T742 122 aa10.19□□□□□ -0.78
GTF3C2-209ENST00000470115 UNQ6190/PRO20217Q6UXQ8 127 aa10.19□□□□□ -0.78
GTF3C2-209ENST00000470115 MRPL35Q9NZE8 188 aaKnown RBP10.19□□□□□ -0.78
GTF3C2-209ENST00000470115 NDUFA1O15239 70 aa10.18□□□□□ -0.78
GTF3C2-209ENST00000470115 LINC00310P59036 64 aa10.18□□□□□ -0.78
GTF3C2-209ENST00000470115 CST9LQ9H4G1 147 aa10.18□□□□□ -0.78
GTF3C2-209ENST00000470115 GEMIN7Q9H840 131 aaKnown RBP10.18□□□□□ -0.78
GTF3C2-209ENST00000470115 NUPR1O60356 82 aa10.17□□□□□ -0.78
GTF3C2-209ENST00000470115 C9orf116Q5BN46 136 aaPredicted RBP10.17□□□□□ -0.78
GTF3C2-209ENST00000470115 TNXBP22105 4242 aa10.17□□□□□ -0.78
GTF3C2-209ENST00000470115 LEPROTL1O95214 131 aa10.16□□□□□ -0.78
GTF3C2-209ENST00000470115 FABP4P15090 132 aa10.16□□□□□ -0.78
GTF3C2-209ENST00000470115 SEC11AP67812 179 aa10.16□□□□□ -0.78
GTF3C2-209ENST00000470115 KIAA0087Q14695 138 aa10.16□□□□□ -0.78
GTF3C2-209ENST00000470115 Q6ZRP5 223 aa10.16□□□□□ -0.78
GTF3C2-209ENST00000470115 IFI27L1Q96BM0 104 aa10.16□□□□□ -0.78
GTF3C2-209ENST00000470115 H0Y8G0 127 aa10.15□□□□□ -0.78
GTF3C2-209ENST00000470115 HERVK_113P63121 156 aa10.15□□□□□ -0.78
GTF3C2-209ENST00000470115 C6orf48Q9UBA6 75 aa10.15□□□□□ -0.78
GTF3C2-209ENST00000470115 SRSF9Q13242 221 aaKnown RBP eCLIP10.13□□□□□ -0.79
GTF3C2-209ENST00000470115 SPINK6Q6UWN8 80 aa10.13□□□□□ -0.79
GTF3C2-209ENST00000470115 C2orf82Q6UX34 121 aa10.13□□□□□ -0.79
GTF3C2-209ENST00000470115 PHF5AQ7RTV0 110 aaKnown RBP10.13□□□□□ -0.79
GTF3C2-209ENST00000470115 LINC00469Q8N7U9 141 aa10.13□□□□□ -0.79
GTF3C2-209ENST00000470115 PACRGQ96M98 296 aaPredicted RBP10.13□□□□□ -0.79
GTF3C2-209ENST00000470115 HSPB8Q9UJY1 196 aa10.13□□□□□ -0.79
GTF3C2-209ENST00000470115 PLA2G2DQ9UNK4 145 aa10.13□□□□□ -0.79
GTF3C2-209ENST00000470115 TINCRA0A1B0GVN0 87 aa10.12□□□□□ -0.79
GTF3C2-209ENST00000470115 TLX1NBP0CAT3 122 aa10.12□□□□□ -0.79
GTF3C2-209ENST00000470115 FAM19A3Q7Z5A8 133 aa10.12□□□□□ -0.79
GTF3C2-209ENST00000470115 LINC01561Q8N1V8 128 aa10.12□□□□□ -0.79
GTF3C2-209ENST00000470115 LINC01600Q96MT4 127 aa10.12□□□□□ -0.79
GTF3C2-209ENST00000470115 FAM168BA1KXE4 195 aa10.11□□□□□ -0.79
GTF3C2-209ENST00000470115 GAGE2EQ4V326 116 aa10.11□□□□□ -0.79
GTF3C2-209ENST00000470115 GAGE2DQ9UEU5 116 aa10.11□□□□□ -0.79
GTF3C2-209ENST00000470115 CDKN2A-AS1Q9UH64 79 aa10.11□□□□□ -0.79
GTF3C2-209ENST00000470115 PSORS1C2Q9UIG4 136 aa10.11□□□□□ -0.79
GTF3C2-209ENST00000470115 CHTOPQ9Y3Y2 248 aaKnown RBP10.11□□□□□ -0.79
GTF3C2-209ENST00000470115 TRBV30A0A0K0K1B3 111 aa10.09□□□□□ -0.79
GTF3C2-209ENST00000470115 S100A6P06703 90 aa10.09□□□□□ -0.79
GTF3C2-209ENST00000470115 TOMM7Q9P0U1 55 aa10.09□□□□□ -0.79
GTF3C2-209ENST00000470115 TRAV12-1A0A0B4J245 112 aa10.08□□□□□ -0.8
GTF3C2-209ENST00000470115 H3BRM9 83 aa10.08□□□□□ -0.8
GTF3C2-209ENST00000470115 PRSS2P07478 247 aa10.08□□□□□ -0.8
GTF3C2-209ENST00000470115 IGLC3P0DOY3 106 aa10.08□□□□□ -0.8
GTF3C2-209ENST00000470115 REG3GQ6UW15 175 aa10.08□□□□□ -0.8
GTF3C2-209ENST00000470115 FAM19A5Q7Z5A7 132 aaPredicted RBP10.08□□□□□ -0.8
GTF3C2-209ENST00000470115 MAP1LC3CQ9BXW4 147 aa10.08□□□□□ -0.8
GTF3C2-209ENST00000470115 C6orf226Q5I0X4 101 aa10.07□□□□□ -0.8
GTF3C2-209ENST00000470115 C1orf137Q5JT78 98 aa10.07□□□□□ -0.8
GTF3C2-209ENST00000470115 COA6Q5JTJ3 125 aaKnown RBP10.07□□□□□ -0.8
GTF3C2-209ENST00000470115 TMEM170BQ5T4T1 132 aa10.07□□□□□ -0.8
GTF3C2-209ENST00000470115 NDUFC2-KCTD14E9PQ53 114 aa10.06□□□□□ -0.8
GTF3C2-209ENST00000470115 SPINK8P0C7L1 97 aa10.06□□□□□ -0.8
GTF3C2-209ENST00000470115 KRTAP7-1Q8IUC3 87 aa10.06□□□□□ -0.8
GTF3C2-209ENST00000470115 UBR4Q5T4S7 5183 aa10.05□□□□□ -0.8
GTF3C2-209ENST00000470115 IGLV5-45A0A087WSX0 123 aa10.05□□□□□ -0.8
GTF3C2-209ENST00000470115 C11orf86A6NJI1 115 aa10.05□□□□□ -0.8
GTF3C2-209ENST00000470115 F8VRH5 84 aa10.05□□□□□ -0.8
GTF3C2-209ENST00000470115 CKS1BP61024 79 aa10.05□□□□□ -0.8
GTF3C2-209ENST00000470115 ODF1Q14990 250 aa10.05□□□□□ -0.8
GTF3C2-209ENST00000470115 KRTAP11-1Q8IUC1 163 aa10.05□□□□□ -0.8
GTF3C2-209ENST00000470115 Q8IZM0 81 aa10.05□□□□□ -0.8
GTF3C2-209ENST00000470115 ZNF22P17026 224 aaPredicted RBP10.04□□□□□ -0.8
GTF3C2-209ENST00000470115 S100A2P29034 98 aa10.04□□□□□ -0.8
GTF3C2-209ENST00000470115 KRTAP10-8P60410 259 aa10.04□□□□□ -0.8
GTF3C2-209ENST00000470115 C9orf129Q5T035 196 aaKnown RBP10.04□□□□□ -0.8
GTF3C2-209ENST00000470115 SMIM1B2RUZ4 78 aa10.03□□□□□ -0.8
GTF3C2-209ENST00000470115 PMCHL2Q9BQD1 86 aa10.03□□□□□ -0.8
GTF3C2-209ENST00000470115 SYS1-DBNDD2H3BUS1 97 aa10.01□□□□□ -0.81
GTF3C2-209ENST00000470115 M0QXV9 152 aa10.01□□□□□ -0.81
GTF3C2-209ENST00000470115 KRTDAPP60985 99 aa10.01□□□□□ -0.81
GTF3C2-209ENST00000470115 COX7B2Q8TF08 81 aa10.01□□□□□ -0.81
GTF3C2-209ENST00000470115 IGLV7-43P04211 117 aa10□□□□□ -0.81
GTF3C2-209ENST00000470115 PLNP26678 52 aa10□□□□□ -0.81
GTF3C2-209ENST00000470115 DPM2O94777 84 aa9.99□□□□□ -0.81
GTF3C2-209ENST00000470115 SNRPEP62304 92 aaKnown RBP9.99□□□□□ -0.81
GTF3C2-209ENST00000470115 UBE2BP63146 152 aa9.99□□□□□ -0.81
GTF3C2-209ENST00000470115 HIST3H2BBQ8N257 126 aa9.99□□□□□ -0.81
GTF3C2-209ENST00000470115 IGKCP01834 107 aa9.98□□□□□ -0.81
GTF3C2-209ENST00000470115 C3orf79P0CE67 100 aa9.98□□□□□ -0.81
GTF3C2-209ENST00000470115 XAGE1AQ9HD64 81 aa9.98□□□□□ -0.81
GTF3C2-209ENST00000470115 PET117Q6UWS5 81 aa9.97□□□□□ -0.81
GTF3C2-209ENST00000470115 DIRC1Q969H9 104 aa9.97□□□□□ -0.81
GTF3C2-209ENST00000470115 TMEM223A0PJW6 202 aa9.96□□□□□ -0.82
GTF3C2-209ENST00000470115 CXCL5P42830 114 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms