RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 NOTCH4Q99466 2003 aa4.45□□□□□ -1.7
CCDC144A-212ENST00000470068 MSMPQ1L6U9 139 aa4.45□□□□□ -1.7
CCDC144A-212ENST00000470068 ALPK3Q96L96 1907 aa4.44□□□□□ -1.7
CCDC144A-212ENST00000470068 IGLV5-39A0A0G2JS06 123 aa4.44□□□□□ -1.7
CCDC144A-212ENST00000470068 CRYGAP11844 174 aa4.44□□□□□ -1.7
CCDC144A-212ENST00000470068 RETNQ9HD89 108 aa4.44□□□□□ -1.7
CCDC144A-212ENST00000470068 GVQW2A0A096LPI5 108 aaPredicted RBP4.43□□□□□ -1.7
CCDC144A-212ENST00000470068 WISP2O76076 250 aa4.43□□□□□ -1.7
CCDC144A-212ENST00000470068 LOC110117498A0A087WWA1 95 aa4.43□□□□□ -1.7
CCDC144A-212ENST00000470068 SMIM1B2RUZ4 78 aa4.43□□□□□ -1.7
CCDC144A-212ENST00000470068 DEFB4AO15263 64 aa4.43□□□□□ -1.7
CCDC144A-212ENST00000470068 FRMD6-AS1P0C7T7 363 aa4.43□□□□□ -1.7
CCDC144A-212ENST00000470068 LRP4O75096 1905 aa4.43□□□□□ -1.7
CCDC144A-212ENST00000470068 SPRNQ5BIV9 151 aa4.43□□□□□ -1.7
CCDC144A-212ENST00000470068 LINC00242Q5T6M2 205 aa4.43□□□□□ -1.7
CCDC144A-212ENST00000470068 SMIM11BQ8TCY0 68 aa4.43□□□□□ -1.7
CCDC144A-212ENST00000470068 DOCK11Q5JSL3 2073 aa4.43□□□□□ -1.7
CCDC144A-212ENST00000470068 Q6ZPA2 131 aa4.42□□□□□ -1.7
CCDC144A-212ENST00000470068 YLPM1P49750 1951 aaKnown RBP4.42□□□□□ -1.7
CCDC144A-212ENST00000470068 KPRPQ5T749 579 aaPredicted RBP4.42□□□□□ -1.7
CCDC144A-212ENST00000470068 IGHV4-28A0A0C4DH34 117 aa4.42□□□□□ -1.7
CCDC144A-212ENST00000470068 RNASE13Q5GAN3 156 aaKnown RBP4.42□□□□□ -1.7
CCDC144A-212ENST00000470068 REG3GQ6UW15 175 aa4.42□□□□□ -1.7
CCDC144A-212ENST00000470068 SBSPONQ8IVN8 264 aa4.42□□□□□ -1.7
CCDC144A-212ENST00000470068 ENHOQ6UWT2 76 aa4.42□□□□□ -1.7
CCDC144A-212ENST00000470068 Q6ZQY7 126 aa4.42□□□□□ -1.7
CCDC144A-212ENST00000470068 WDR87Q6ZQQ6 2873 aa4.41□□□□□ -1.7
CCDC144A-212ENST00000470068 FAM19A4Q96LR4 140 aa4.41□□□□□ -1.7
CCDC144A-212ENST00000470068 C8orf87E5RJ46 101 aa4.41□□□□□ -1.7
CCDC144A-212ENST00000470068 MT-ATP8P03928 68 aa4.41□□□□□ -1.7
CCDC144A-212ENST00000470068 MAPKAPK5-AS1Q8N8E1 139 aa4.41□□□□□ -1.7
CCDC144A-212ENST00000470068 CLPSL2Q6UWE3 100 aa4.4□□□□□ -1.7
CCDC144A-212ENST00000470068 LINC00575Q6W349 94 aa4.4□□□□□ -1.7
CCDC144A-212ENST00000470068 SDIM1Q6ZPB5 146 aa4.4□□□□□ -1.7
CCDC144A-212ENST00000470068 UTP20O75691 2785 aaKnown RBP4.4□□□□□ -1.7
CCDC144A-212ENST00000470068 WFDC10AQ9H1F0 79 aa4.4□□□□□ -1.7
CCDC144A-212ENST00000470068 CELA1Q9UNI1 258 aa4.4□□□□□ -1.7
CCDC144A-212ENST00000470068 NACAE9PAV3 2078 aa4.4□□□□□ -1.71
CCDC144A-212ENST00000470068 IGLV10-54A0A075B6I4 117 aa4.4□□□□□ -1.71
CCDC144A-212ENST00000470068 EPM2AB3EWF7 344 aa4.4□□□□□ -1.71
CCDC144A-212ENST00000470068 LINC01556Q5JQF7 62 aa4.4□□□□□ -1.71
CCDC144A-212ENST00000470068 C1orf137Q5JT78 98 aa4.39□□□□□ -1.71
CCDC144A-212ENST00000470068 A8MTW9 85 aa4.39□□□□□ -1.71
CCDC144A-212ENST00000470068 FAM19A5Q7Z5A7 132 aaPredicted RBP4.39□□□□□ -1.71
CCDC144A-212ENST00000470068 DYSFO75923 2080 aa4.39□□□□□ -1.71
CCDC144A-212ENST00000470068 STAB2Q8WWQ8 2551 aa4.39□□□□□ -1.71
CCDC144A-212ENST00000470068 PHF3Q92576 2039 aaKnown RBP4.39□□□□□ -1.71
CCDC144A-212ENST00000470068 ELOF1P60002 83 aaKnown RBP4.39□□□□□ -1.71
CCDC144A-212ENST00000470068 PLA2G1BP04054 148 aaKnown RBP4.38□□□□□ -1.71
CCDC144A-212ENST00000470068 C11orf72Q8NBR9 251 aa4.38□□□□□ -1.71
CCDC144A-212ENST00000470068 CYP4F30PQ9H0H9 118 aa4.38□□□□□ -1.71
CCDC144A-212ENST00000470068 PLAC8L1A1L4L8 177 aa4.38□□□□□ -1.71
CCDC144A-212ENST00000470068 FHL2Q14192 279 aa4.38□□□□□ -1.71
CCDC144A-212ENST00000470068 A0A096LPF7 62 aa4.38□□□□□ -1.71
CCDC144A-212ENST00000470068 KIF25-AS1Q9Y6Z4 181 aa4.38□□□□□ -1.71
CCDC144A-212ENST00000470068 LINC00694P0DN24 101 aa4.37□□□□□ -1.71
CCDC144A-212ENST00000470068 IGHV4-30-4P0DP06 118 aa4.37□□□□□ -1.71
CCDC144A-212ENST00000470068 TENM4Q6N022 2769 aa4.37□□□□□ -1.71
CCDC144A-212ENST00000470068 A0A0J9YWU9 116 aa4.37□□□□□ -1.71
CCDC144A-212ENST00000470068 TEX15Q9BXT5 2789 aa4.37□□□□□ -1.71
CCDC144A-212ENST00000470068 ODF3L2Q3SX64 289 aa4.37□□□□□ -1.71
CCDC144A-212ENST00000470068 CCDC179H3BU77 68 aa4.36□□□□□ -1.71
CCDC144A-212ENST00000470068 MOBPQ13875 183 aa4.36□□□□□ -1.71
CCDC144A-212ENST00000470068 LINC01600Q96MT4 127 aa4.36□□□□□ -1.71
CCDC144A-212ENST00000470068 KIAA2026Q5HYC2 2103 aa4.36□□□□□ -1.71
CCDC144A-212ENST00000470068 A6NED7 52 aa4.36□□□□□ -1.71
CCDC144A-212ENST00000470068 LINC00336Q6ZUF6 198 aa4.36□□□□□ -1.71
CCDC144A-212ENST00000470068 C11orf21Q9P2W6 132 aa4.36□□□□□ -1.71
CCDC144A-212ENST00000470068 TNRC6BQ9UPQ9 1833 aaKnown RBP4.36□□□□□ -1.71
CCDC144A-212ENST00000470068 ATG2AQ2TAZ0 1938 aa4.36□□□□□ -1.71
CCDC144A-212ENST00000470068 C6orf223Q8N319 242 aa4.36□□□□□ -1.71
CCDC144A-212ENST00000470068 XGP55808 180 aa4.35□□□□□ -1.71
CCDC144A-212ENST00000470068 UBR5O95071 2799 aaPredicted RBP4.35□□□□□ -1.71
CCDC144A-212ENST00000470068 PLA2G2DQ9UNK4 145 aa4.35□□□□□ -1.71
CCDC144A-212ENST00000470068 ESRGQ1W209 222 aa4.35□□□□□ -1.71
CCDC144A-212ENST00000470068 ACYP2P14621 99 aa4.35□□□□□ -1.71
CCDC144A-212ENST00000470068 CENPFP49454 3210 aa4.35□□□□□ -1.71
CCDC144A-212ENST00000470068 LOC101927531A0A1B0GV80 90 aa4.34□□□□□ -1.71
CCDC144A-212ENST00000470068 LINC01547P58512 204 aaPredicted RBP4.34□□□□□ -1.71
CCDC144A-212ENST00000470068 TMEM254Q8TBM7 123 aa4.34□□□□□ -1.71
CCDC144A-212ENST00000470068 HRCT1Q6UXD1 115 aa4.34□□□□□ -1.71
CCDC144A-212ENST00000470068 URB1-AS1Q96HZ7 61 aa4.34□□□□□ -1.71
CCDC144A-212ENST00000470068 TTTY13Q9BZ97 58 aa4.34□□□□□ -1.71
CCDC144A-212ENST00000470068 TANC2Q9HCD6 1990 aa4.34□□□□□ -1.72
CCDC144A-212ENST00000470068 TRBV7-4A0A0J9YYF1 115 aa4.34□□□□□ -1.72
CCDC144A-212ENST00000470068 ZNF292O60281 2723 aa4.34□□□□□ -1.72
CCDC144A-212ENST00000470068 LINC00310P59036 64 aa4.33□□□□□ -1.72
CCDC144A-212ENST00000470068 NANOS2P60321 138 aaKnown RBP4.33□□□□□ -1.72
CCDC144A-212ENST00000470068 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
CCDC144A-212ENST00000470068 CEMP1Q6PRD7 247 aaPredicted RBP4.33□□□□□ -1.72
CCDC144A-212ENST00000470068 C1orf158Q8N1D5 194 aa4.33□□□□□ -1.72
CCDC144A-212ENST00000470068 MED12LQ86YW9 2145 aa4.33□□□□□ -1.72
CCDC144A-212ENST00000470068 IGLV5-52A0A0A0MRZ9 124 aa4.33□□□□□ -1.72
CCDC144A-212ENST00000470068 PRR9Q5T870 116 aa4.33□□□□□ -1.72
CCDC144A-212ENST00000470068 A8MZ25 164 aa4.33□□□□□ -1.72
CCDC144A-212ENST00000470068 CD164Q04900 197 aa4.33□□□□□ -1.72
CCDC144A-212ENST00000470068 IGLV4-60A0A075B6I1 120 aa4.32□□□□□ -1.72
CCDC144A-212ENST00000470068 SPAG11AQ6PDA7 123 aa4.32□□□□□ -1.72
CCDC144A-212ENST00000470068 Q6ZVQ6 151 aa4.32□□□□□ -1.72
CCDC144A-212ENST00000470068 LINC00337Q8N6G1 96 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms