RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 PNRC1Q12796 327 aaPredicted RBP10.81□□□□□ -0.68
NCKIPSD-209ENST00000470006 SEC61BP60468 96 aaKnown RBP10.8□□□□□ -0.68
NCKIPSD-209ENST00000470006 FAM74A3Q4VXF1 159 aa10.8□□□□□ -0.68
NCKIPSD-209ENST00000470006 FP248Q71RG6 208 aaPredicted RBP10.8□□□□□ -0.68
NCKIPSD-209ENST00000470006 VCX2Q9H322 139 aa10.8□□□□□ -0.68
NCKIPSD-209ENST00000470006 BATF3Q9NR55 127 aa10.8□□□□□ -0.68
NCKIPSD-209ENST00000470006 A0A1B0GW15 77 aa10.79□□□□□ -0.68
NCKIPSD-209ENST00000470006 F8W036 122 aa10.79□□□□□ -0.68
NCKIPSD-209ENST00000470006 BLOC1S1P78537 153 aa10.79□□□□□ -0.68
NCKIPSD-209ENST00000470006 C4orf48Q5BLP8 95 aa10.79□□□□□ -0.68
NCKIPSD-209ENST00000470006 KRTAP4-1Q9BYQ7 146 aa10.79□□□□□ -0.68
NCKIPSD-209ENST00000470006 IGKV2-28A0A075B6P5 120 aa10.78□□□□□ -0.68
NCKIPSD-209ENST00000470006 IGKV2D-28P01615 120 aa10.78□□□□□ -0.68
NCKIPSD-209ENST00000470006 PRLHP81277 87 aa10.78□□□□□ -0.68
NCKIPSD-209ENST00000470006 C3orf22Q8N5N4 141 aa10.78□□□□□ -0.68
NCKIPSD-209ENST00000470006 SPAG11AQ6PDA7 123 aa10.77□□□□□ -0.69
NCKIPSD-209ENST00000470006 PPBPP02775 128 aa10.76□□□□□ -0.69
NCKIPSD-209ENST00000470006 S100A8P05109 93 aa10.76□□□□□ -0.69
NCKIPSD-209ENST00000470006 KRTAP13-3Q3SY46 172 aa10.76□□□□□ -0.69
NCKIPSD-209ENST00000470006 MRPL54Q6P161 138 aaKnown RBP10.76□□□□□ -0.69
NCKIPSD-209ENST00000470006 FAM19A1Q7Z5A9 133 aa10.76□□□□□ -0.69
NCKIPSD-209ENST00000470006 LOC389332A0A1B0GUA5 103 aa10.75□□□□□ -0.69
NCKIPSD-209ENST00000470006 SMIM27A0A1W2PRY6 76 aa10.75□□□□□ -0.69
NCKIPSD-209ENST00000470006 CXCL5P42830 114 aa10.75□□□□□ -0.69
NCKIPSD-209ENST00000470006 RAB5BP61020 215 aa10.75□□□□□ -0.69
NCKIPSD-209ENST00000470006 ORMDL3Q8N138 153 aa10.74□□□□□ -0.69
NCKIPSD-209ENST00000470006 GEMIN7Q9H840 131 aaKnown RBP10.74□□□□□ -0.69
NCKIPSD-209ENST00000470006 CDKN2A-AS1Q9UH64 79 aa10.74□□□□□ -0.69
NCKIPSD-209ENST00000470006 CYSLTR1Q9Y271 337 aa10.74□□□□□ -0.69
NCKIPSD-209ENST00000470006 SCO1O75880 301 aa10.73□□□□□ -0.69
NCKIPSD-209ENST00000470006 ADIRFQ15847 76 aa10.73□□□□□ -0.69
NCKIPSD-209ENST00000470006 TMEM136Q6ZRR5 245 aa10.73□□□□□ -0.69
NCKIPSD-209ENST00000470006 PRELID3AQ96N28 172 aa10.73□□□□□ -0.69
NCKIPSD-209ENST00000470006 AMELXQ99217 191 aa10.73□□□□□ -0.69
NCKIPSD-209ENST00000470006 IGLV5-37A0A075B6J1 123 aa10.72□□□□□ -0.69
NCKIPSD-209ENST00000470006 HERVK_113P63121 156 aa10.72□□□□□ -0.69
NCKIPSD-209ENST00000470006 ALKAL2Q6UX46 152 aa10.72□□□□□ -0.69
NCKIPSD-209ENST00000470006 C2orf66Q6UXQ4 117 aa10.72□□□□□ -0.69
NCKIPSD-209ENST00000470006 SRP19P09132 144 aaKnown RBP10.71□□□□□ -0.69
NCKIPSD-209ENST00000470006 RPL23P62829 140 aaKnown RBP10.71□□□□□ -0.69
NCKIPSD-209ENST00000470006 SEC11AP67812 179 aa10.71□□□□□ -0.69
NCKIPSD-209ENST00000470006 CBLN2Q8IUK8 224 aa10.7□□□□□ -0.7
NCKIPSD-209ENST00000470006 PLEKHB2Q96CS7 222 aa10.7□□□□□ -0.7
NCKIPSD-209ENST00000470006 TMEM238C9JI98 176 aa10.68□□□□□ -0.7
NCKIPSD-209ENST00000470006 FAM19A3Q7Z5A8 133 aa10.68□□□□□ -0.7
NCKIPSD-209ENST00000470006 COX7B2Q8TF08 81 aa10.68□□□□□ -0.7
NCKIPSD-209ENST00000470006 TMEM126AQ9H061 195 aa10.68□□□□□ -0.7
NCKIPSD-209ENST00000470006 MAP1LC3AQ9H492 121 aa10.68□□□□□ -0.7
NCKIPSD-209ENST00000470006 HIGD2AQ9BW72 106 aa10.67□□□□□ -0.7
NCKIPSD-209ENST00000470006 A0A1B0GVG6 124 aa10.66□□□□□ -0.7
NCKIPSD-209ENST00000470006 A0A1B0GXF2 115 aa10.65□□□□□ -0.7
NCKIPSD-209ENST00000470006 PAPPA-AS1Q5QFB9 102 aa10.65□□□□□ -0.7
NCKIPSD-209ENST00000470006 DAND5Q8N907 189 aa10.65□□□□□ -0.7
NCKIPSD-209ENST00000470006 GNB1LQ9BYB4 327 aa10.65□□□□□ -0.7
NCKIPSD-209ENST00000470006 IGIPA6NJ69 53 aa10.64□□□□□ -0.71
NCKIPSD-209ENST00000470006 NPSP0C0P6 89 aa10.64□□□□□ -0.71
NCKIPSD-209ENST00000470006 ORMDL2Q53FV1 153 aa10.64□□□□□ -0.71
NCKIPSD-209ENST00000470006 Q8N8P6 123 aa10.64□□□□□ -0.71
NCKIPSD-209ENST00000470006 Q8NBF4 154 aa10.64□□□□□ -0.71
NCKIPSD-209ENST00000470006 NAT8Q9UHE5 227 aa10.64□□□□□ -0.71
NCKIPSD-209ENST00000470006 NDUFA12Q9UI09 145 aa10.64□□□□□ -0.71
NCKIPSD-209ENST00000470006 SMIM1B2RUZ4 78 aa10.63□□□□□ -0.71
NCKIPSD-209ENST00000470006 PDZD11Q5EBL8 140 aa10.63□□□□□ -0.71
NCKIPSD-209ENST00000470006 TCTE3Q8IZS6 198 aa10.63□□□□□ -0.71
NCKIPSD-209ENST00000470006 PRSS47A8MTI9 375 aa10.62□□□□□ -0.71
NCKIPSD-209ENST00000470006 M0R378 163 aa10.61□□□□□ -0.71
NCKIPSD-209ENST00000470006 CFC1BP0CG36 223 aa10.61□□□□□ -0.71
NCKIPSD-209ENST00000470006 PFN2P35080 140 aa10.61□□□□□ -0.71
NCKIPSD-209ENST00000470006 LCE2CQ5TA81 110 aa10.61□□□□□ -0.71
NCKIPSD-209ENST00000470006 LAMTOR2Q9Y2Q5 125 aa10.61□□□□□ -0.71
NCKIPSD-209ENST00000470006 SPRR4Q96PI1 79 aa10.6□□□□□ -0.71
NCKIPSD-209ENST00000470006 ATP5LO75964 103 aa10.59□□□□□ -0.71
NCKIPSD-209ENST00000470006 SPINK1P00995 79 aa10.59□□□□□ -0.71
NCKIPSD-209ENST00000470006 SPINK8P0C7L1 97 aa10.58□□□□□ -0.72
NCKIPSD-209ENST00000470006 RPL24P83731 157 aaKnown RBP10.58□□□□□ -0.72
NCKIPSD-209ENST00000470006 ZNF706Q9Y5V0 76 aaPredicted RBP10.58□□□□□ -0.72
NCKIPSD-209ENST00000470006 VPREB1P12018 145 aa10.57□□□□□ -0.72
NCKIPSD-209ENST00000470006 RAB14P61106 215 aa10.57□□□□□ -0.72
NCKIPSD-209ENST00000470006 MT1HP80294 61 aa10.57□□□□□ -0.72
NCKIPSD-209ENST00000470006 ATP5L2Q7Z4Y8 100 aa10.57□□□□□ -0.72
NCKIPSD-209ENST00000470006 TINCRA0A1B0GVN0 87 aa10.55□□□□□ -0.72
NCKIPSD-209ENST00000470006 G0S2P27469 103 aa10.55□□□□□ -0.72
NCKIPSD-209ENST00000470006 TIMM17AQ99595 171 aa10.55□□□□□ -0.72
NCKIPSD-209ENST00000470006 K7EMI3 77 aa10.54□□□□□ -0.72
NCKIPSD-209ENST00000470006 FAM19A2Q8N3H0 131 aa10.54□□□□□ -0.72
NCKIPSD-209ENST00000470006 SND1-IT1Q9HBX3 110 aa10.54□□□□□ -0.72
NCKIPSD-209ENST00000470006 XP32Q5T750 250 aa10.53□□□□□ -0.72
NCKIPSD-209ENST00000470006 SCGB3A1Q96QR1 104 aa10.53□□□□□ -0.72
NCKIPSD-209ENST00000470006 C9JQL5 133 aa10.52□□□□□ -0.73
NCKIPSD-209ENST00000470006 NXT2Q9NPJ8 142 aaKnown RBP10.52□□□□□ -0.73
NCKIPSD-209ENST00000470006 TOMM6Q96B49 74 aa10.51□□□□□ -0.73
NCKIPSD-209ENST00000470006 IGLV5-45A0A087WSX0 123 aa10.5□□□□□ -0.73
NCKIPSD-209ENST00000470006 ERASQ7Z444 233 aa10.5□□□□□ -0.73
NCKIPSD-209ENST00000470006 AKAP14Q86UN6 197 aa10.49□□□□□ -0.73
NCKIPSD-209ENST00000470006 H3BRM9 83 aa10.48□□□□□ -0.73
NCKIPSD-209ENST00000470006 PEA15Q15121 130 aa10.48□□□□□ -0.73
NCKIPSD-209ENST00000470006 Q8N377 158 aa10.48□□□□□ -0.73
NCKIPSD-209ENST00000470006 ERG28Q9UKR5 140 aa10.48□□□□□ -0.73
NCKIPSD-209ENST00000470006 M0R2T5 61 aa10.47□□□□□ -0.73
NCKIPSD-209ENST00000470006 SLC25A20O43772 301 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms