RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 BLOC1S1P78537 153 aa10.44□□□□□ -0.74
TTC28-205ENST00000469670 C2orf88Q9BSF0 95 aa10.44□□□□□ -0.74
TTC28-205ENST00000469670 A0A1B0GW15 77 aa10.43□□□□□ -0.74
TTC28-205ENST00000469670 NDUFA5Q16718 116 aa10.43□□□□□ -0.74
TTC28-205ENST00000469670 ZC2HC1BQ5TFG8 222 aa10.43□□□□□ -0.74
TTC28-205ENST00000469670 ALKAL2Q6UX46 152 aa10.43□□□□□ -0.74
TTC28-205ENST00000469670 F8VRH5 84 aa10.42□□□□□ -0.74
TTC28-205ENST00000469670 RAB14P61106 215 aa10.42□□□□□ -0.74
TTC28-205ENST00000469670 ASB16-AS1Q495Z4 193 aa10.42□□□□□ -0.74
TTC28-205ENST00000469670 SMIM27A0A1W2PRY6 76 aa10.41□□□□□ -0.74
TTC28-205ENST00000469670 SRSF3P84103 164 aaKnown RBP10.41□□□□□ -0.74
TTC28-205ENST00000469670 CLLU1Q5K131 121 aa10.41□□□□□ -0.74
TTC28-205ENST00000469670 LINC00337Q8N6G1 96 aa10.41□□□□□ -0.74
TTC28-205ENST00000469670 F8W036 122 aa10.4□□□□□ -0.74
TTC28-205ENST00000469670 PPBPP02775 128 aa10.4□□□□□ -0.74
TTC28-205ENST00000469670 KRTAP4-1Q9BYQ7 146 aa10.4□□□□□ -0.74
TTC28-205ENST00000469670 SRP19P09132 144 aaKnown RBP10.39□□□□□ -0.75
TTC28-205ENST00000469670 PNRC1Q12796 327 aaPredicted RBP10.39□□□□□ -0.75
TTC28-205ENST00000469670 AMELXQ99217 191 aa10.39□□□□□ -0.75
TTC28-205ENST00000469670 S100A8P05109 93 aa10.38□□□□□ -0.75
TTC28-205ENST00000469670 MRPL54Q6P161 138 aaKnown RBP10.38□□□□□ -0.75
TTC28-205ENST00000469670 FP248Q71RG6 208 aaPredicted RBP10.38□□□□□ -0.75
TTC28-205ENST00000469670 VCX2Q9H322 139 aa10.38□□□□□ -0.75
TTC28-205ENST00000469670 IGLV5-37A0A075B6J1 123 aa10.37□□□□□ -0.75
TTC28-205ENST00000469670 RPL23P62829 140 aaKnown RBP10.37□□□□□ -0.75
TTC28-205ENST00000469670 FAM19A3Q7Z5A8 133 aa10.37□□□□□ -0.75
TTC28-205ENST00000469670 ORMDL3Q8N138 153 aa10.37□□□□□ -0.75
TTC28-205ENST00000469670 CXCL5P42830 114 aa10.36□□□□□ -0.75
TTC28-205ENST00000469670 KRTAP13-3Q3SY46 172 aa10.36□□□□□ -0.75
TTC28-205ENST00000469670 C2orf66Q6UXQ4 117 aa10.36□□□□□ -0.75
TTC28-205ENST00000469670 TMEM136Q6ZRR5 245 aa10.36□□□□□ -0.75
TTC28-205ENST00000469670 SLC7A5P1Q8MH63 180 aa10.36□□□□□ -0.75
TTC28-205ENST00000469670 C3orf22Q8N5N4 141 aa10.36□□□□□ -0.75
TTC28-205ENST00000469670 NKAPP1Q8N9T2 125 aa10.36□□□□□ -0.75
TTC28-205ENST00000469670 CDKN2A-AS1Q9UH64 79 aa10.36□□□□□ -0.75
TTC28-205ENST00000469670 A0A1B0GXF2 115 aa10.35□□□□□ -0.75
TTC28-205ENST00000469670 PRLHP81277 87 aa10.35□□□□□ -0.75
TTC28-205ENST00000469670 ADIRFQ15847 76 aa10.35□□□□□ -0.75
TTC28-205ENST00000469670 SPAG11AQ6PDA7 123 aa10.35□□□□□ -0.75
TTC28-205ENST00000469670 PRELID3AQ96N28 172 aa10.35□□□□□ -0.75
TTC28-205ENST00000469670 CYSLTR1Q9Y271 337 aa10.35□□□□□ -0.75
TTC28-205ENST00000469670 IGKV2-28A0A075B6P5 120 aa10.34□□□□□ -0.75
TTC28-205ENST00000469670 IGKV2D-28P01615 120 aa10.34□□□□□ -0.75
TTC28-205ENST00000469670 HERVK_113P63121 156 aa10.34□□□□□ -0.75
TTC28-205ENST00000469670 LOC389332A0A1B0GUA5 103 aa10.33□□□□□ -0.76
TTC28-205ENST00000469670 SEC61BP60468 96 aaKnown RBP10.33□□□□□ -0.76
TTC28-205ENST00000469670 SCO1O75880 301 aa10.32□□□□□ -0.76
TTC28-205ENST00000469670 SEC11AP67812 179 aa10.32□□□□□ -0.76
TTC28-205ENST00000469670 PRSS47A8MTI9 375 aa10.31□□□□□ -0.76
TTC28-205ENST00000469670 ATP6V1G1O75348 118 aa10.31□□□□□ -0.76
TTC28-205ENST00000469670 NPSP0C0P6 89 aa10.31□□□□□ -0.76
TTC28-205ENST00000469670 FAM19A1Q7Z5A9 133 aa10.31□□□□□ -0.76
TTC28-205ENST00000469670 GEMIN7Q9H840 131 aaKnown RBP10.31□□□□□ -0.76
TTC28-205ENST00000469670 IGIPA6NJ69 53 aa10.3□□□□□ -0.76
TTC28-205ENST00000469670 COMMD7Q86VX2 200 aa10.3□□□□□ -0.76
TTC28-205ENST00000469670 PLEKHB2Q96CS7 222 aa10.3□□□□□ -0.76
TTC28-205ENST00000469670 NAT8Q9UHE5 227 aa10.3□□□□□ -0.76
TTC28-205ENST00000469670 RAB5BP61020 215 aa10.29□□□□□ -0.76
TTC28-205ENST00000469670 MAP1LC3AQ9H492 121 aa10.29□□□□□ -0.76
TTC28-205ENST00000469670 C4orf48Q5BLP8 95 aa10.28□□□□□ -0.76
TTC28-205ENST00000469670 Q8N8P6 123 aa10.28□□□□□ -0.76
TTC28-205ENST00000469670 COX7B2Q8TF08 81 aa10.28□□□□□ -0.76
TTC28-205ENST00000469670 TMEM126AQ9H061 195 aa10.28□□□□□ -0.76
TTC28-205ENST00000469670 SMIM1B2RUZ4 78 aa10.27□□□□□ -0.77
TTC28-205ENST00000469670 TMEM238C9JI98 176 aa10.27□□□□□ -0.77
TTC28-205ENST00000469670 ORMDL2Q53FV1 153 aa10.27□□□□□ -0.77
TTC28-205ENST00000469670 LAMTOR2Q9Y2Q5 125 aa10.27□□□□□ -0.77
TTC28-205ENST00000469670 PAPPA-AS1Q5QFB9 102 aa10.26□□□□□ -0.77
TTC28-205ENST00000469670 CBLN2Q8IUK8 224 aa10.26□□□□□ -0.77
TTC28-205ENST00000469670 S100A1P23297 94 aa10.25□□□□□ -0.77
TTC28-205ENST00000469670 PDZD11Q5EBL8 140 aa10.25□□□□□ -0.77
TTC28-205ENST00000469670 M0R378 163 aa10.24□□□□□ -0.77
TTC28-205ENST00000469670 LCE2CQ5TA81 110 aa10.24□□□□□ -0.77
TTC28-205ENST00000469670 ATP5L2Q7Z4Y8 100 aa10.24□□□□□ -0.77
TTC28-205ENST00000469670 GNB1LQ9BYB4 327 aa10.24□□□□□ -0.77
TTC28-205ENST00000469670 C9JQL5 133 aa10.22□□□□□ -0.77
TTC28-205ENST00000469670 UQCC3Q6UW78 93 aa10.22□□□□□ -0.77
TTC28-205ENST00000469670 HIGD2AQ9BW72 106 aa10.22□□□□□ -0.77
TTC28-205ENST00000469670 K7EMI3 77 aa10.21□□□□□ -0.77
TTC28-205ENST00000469670 VPREB1P12018 145 aa10.21□□□□□ -0.77
TTC28-205ENST00000469670 DAND5Q8N907 189 aa10.21□□□□□ -0.77
TTC28-205ENST00000469670 SPRR4Q96PI1 79 aa10.21□□□□□ -0.77
TTC28-205ENST00000469670 TIMM17AQ99595 171 aa10.21□□□□□ -0.77
TTC28-205ENST00000469670 Q8NBF4 154 aa10.2□□□□□ -0.78
TTC28-205ENST00000469670 TINCRA0A1B0GVN0 87 aa10.19□□□□□ -0.78
TTC28-205ENST00000469670 IGLV5-45A0A087WSX0 123 aa10.18□□□□□ -0.78
TTC28-205ENST00000469670 ATP5LO75964 103 aa10.18□□□□□ -0.78
TTC28-205ENST00000469670 SPINK1P00995 79 aa10.18□□□□□ -0.78
TTC28-205ENST00000469670 SPINK8P0C7L1 97 aa10.18□□□□□ -0.78
TTC28-205ENST00000469670 PFN2P35080 140 aa10.18□□□□□ -0.78
TTC28-205ENST00000469670 PEA15Q15121 130 aa10.17□□□□□ -0.78
TTC28-205ENST00000469670 TOMM6Q96B49 74 aa10.17□□□□□ -0.78
TTC28-205ENST00000469670 CFC1BP0CG36 223 aa10.16□□□□□ -0.78
TTC28-205ENST00000469670 G0S2P27469 103 aa10.16□□□□□ -0.78
TTC28-205ENST00000469670 MT1HP80294 61 aa10.16□□□□□ -0.78
TTC28-205ENST00000469670 RPL24P83731 157 aaKnown RBP10.16□□□□□ -0.78
TTC28-205ENST00000469670 NXT2Q9NPJ8 142 aaKnown RBP10.16□□□□□ -0.78
TTC28-205ENST00000469670 ZNF706Q9Y5V0 76 aaPredicted RBP10.16□□□□□ -0.78
TTC28-205ENST00000469670 SND1-IT1Q9HBX3 110 aa10.15□□□□□ -0.78
TTC28-205ENST00000469670 NDUFA12Q9UI09 145 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms