RNA–Protein interactions for RNA: ENST00000469077.1

PTPN22-204, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 2

Gene PTPN22, Length 562 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-204ENST00000469077 DR1Q01658 176 aa-1.22□□□□□ -2.6
PTPN22-204ENST00000469077 C5orf38Q86SI9 138 aa-1.22□□□□□ -2.6
PTPN22-204ENST00000469077 C8orf59Q8N0T1 100 aaPredicted RBP-1.22□□□□□ -2.6
PTPN22-204ENST00000469077 ARL2-SNX15V9GYD0 113 aa-1.22□□□□□ -2.6
PTPN22-204ENST00000469077 TNRC18O15417 2968 aaPredicted RBP-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 CEP152O94986 1710 aa-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 PLEKHH2Q8IVE3 1493 aa-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 DOCK2Q92608 1830 aa-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 ARPC4P59998 168 aa-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 Q56UQ5 140 aa-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 LZICQ8WZA0 190 aa-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 LINC00846Q9NV44 126 aa-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 CRIPTQ9P021 101 aa-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 UQCR10Q9UDW1 63 aa-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 DNHD1Q96M86 4753 aa-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 DNAH11Q96DT5 4516 aa-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 REV3LO60673 3130 aa-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 COL4A6Q14031 1691 aa-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 QRICH2Q9H0J4 1663 aa-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 XRN1Q8IZH2 1706 aaKnown RBP-1.23□□□□□ -2.61
PTPN22-204ENST00000469077 MRC2Q9UBG0 1479 aa-1.24□□□□□ -2.61
PTPN22-204ENST00000469077 PRRC2CQ9Y520 2896 aaKnown RBP-1.24□□□□□ -2.61
PTPN22-204ENST00000469077 H0YGG7 62 aa-1.24□□□□□ -2.61
PTPN22-204ENST00000469077 I3L3M4 83 aa-1.24□□□□□ -2.61
PTPN22-204ENST00000469077 UBE2D3P61077 147 aa-1.24□□□□□ -2.61
PTPN22-204ENST00000469077 UBE2D2P62837 147 aa-1.24□□□□□ -2.61
PTPN22-204ENST00000469077 SEC11AP67812 179 aa-1.24□□□□□ -2.61
PTPN22-204ENST00000469077 AKAP14Q86UN6 197 aa-1.24□□□□□ -2.61
PTPN22-204ENST00000469077 ARL11Q969Q4 196 aa-1.24□□□□□ -2.61
PTPN22-204ENST00000469077 SPEF2Q9C093 1822 aa-1.24□□□□□ -2.61
PTPN22-204ENST00000469077 EDC4Q6P2E9 1401 aaKnown RBP-1.24□□□□□ -2.61
PTPN22-204ENST00000469077 NCOA3Q9Y6Q9 1424 aa-1.24□□□□□ -2.61
PTPN22-204ENST00000469077 DNAH7Q8WXX0 4024 aa-1.25□□□□□ -2.61
PTPN22-204ENST00000469077 MEIG1Q5JSS6 88 aa-1.25□□□□□ -2.61
PTPN22-204ENST00000469077 PFDN5Q99471 154 aa-1.25□□□□□ -2.61
PTPN22-204ENST00000469077 MRPL34Q9BQ48 92 aaKnown RBP-1.25□□□□□ -2.61
PTPN22-204ENST00000469077 BTAF1O14981 1849 aa-1.25□□□□□ -2.61
PTPN22-204ENST00000469077 DNAH1Q9P2D7 4330 aa-1.25□□□□□ -2.61
PTPN22-204ENST00000469077 DIP2CQ9Y2E4 1556 aa-1.25□□□□□ -2.61
PTPN22-204ENST00000469077 CMYA5Q8N3K9 4069 aa-1.26□□□□□ -2.61
PTPN22-204ENST00000469077 MIF4GDA9UHW6 222 aaKnown RBP-1.26□□□□□ -2.61
PTPN22-204ENST00000469077 SAA2P0DJI9 122 aaPredicted RBP-1.26□□□□□ -2.61
PTPN22-204ENST00000469077 LELP1Q5T871 98 aa-1.26□□□□□ -2.61
PTPN22-204ENST00000469077 PAIP2BQ9ULR5 123 aaKnown RBP-1.26□□□□□ -2.61
PTPN22-204ENST00000469077 NLRP1Q9C000 1473 aa-1.26□□□□□ -2.61
PTPN22-204ENST00000469077 CICQ96RK0 1608 aaPredicted RBP-1.26□□□□□ -2.61
PTPN22-204ENST00000469077 NBASA2RRP1 2371 aa-1.27□□□□□ -2.61
PTPN22-204ENST00000469077 A0A1B0GWA3 101 aa-1.27□□□□□ -2.61
PTPN22-204ENST00000469077 FAM223BA6NKX1 122 aa-1.27□□□□□ -2.61
PTPN22-204ENST00000469077 CCL22O00626 93 aa-1.27□□□□□ -2.61
PTPN22-204ENST00000469077 APOC2P02655 101 aa-1.27□□□□□ -2.61
PTPN22-204ENST00000469077 SELENOWP63302 87 aa-1.27□□□□□ -2.61
PTPN22-204ENST00000469077 CATR1Q13166 79 aa-1.27□□□□□ -2.61
PTPN22-204ENST00000469077 C9orf153Q5TBE3 101 aa-1.27□□□□□ -2.61
PTPN22-204ENST00000469077 MBD5Q9P267 1494 aa-1.27□□□□□ -2.61
PTPN22-204ENST00000469077 LAMA3Q16787 3333 aa-1.27□□□□□ -2.61
PTPN22-204ENST00000469077 DMXL1Q9Y485 3027 aa-1.28□□□□□ -2.61
PTPN22-204ENST00000469077 MARF1Q9Y4F3 1742 aaKnown RBP-1.28□□□□□ -2.61
PTPN22-204ENST00000469077 A0A1B0GU69 56 aa-1.28□□□□□ -2.61
PTPN22-204ENST00000469077 F6UZH7 168 aa-1.28□□□□□ -2.61
PTPN22-204ENST00000469077 H3BNG1 76 aa-1.28□□□□□ -2.61
PTPN22-204ENST00000469077 COX6CP09669 75 aa-1.28□□□□□ -2.61
PTPN22-204ENST00000469077 LINC00470Q9BZP3 86 aa-1.28□□□□□ -2.61
PTPN22-204ENST00000469077 PSME4Q14997 1843 aa-1.29□□□□□ -2.62
PTPN22-204ENST00000469077 UBE2L5PA0A1B0GUS4 154 aa-1.29□□□□□ -2.62
PTPN22-204ENST00000469077 FGF7P21781 194 aa-1.29□□□□□ -2.62
PTPN22-204ENST00000469077 UBE2L3P68036 154 aaKnown RBP-1.29□□□□□ -2.62
PTPN22-204ENST00000469077 Q0VG73 95 aa-1.29□□□□□ -2.62
PTPN22-204ENST00000469077 C6orf201Q7Z4U5 140 aa-1.29□□□□□ -2.62
PTPN22-204ENST00000469077 WFDC13Q8IUB5 93 aa-1.29□□□□□ -2.62
PTPN22-204ENST00000469077 CDKN2A-AS1Q9UH64 79 aa-1.29□□□□□ -2.62
PTPN22-204ENST00000469077 TRANK1O15050 2925 aa-1.29□□□□□ -2.62
PTPN22-204ENST00000469077 ANKRD11Q6UB99 2663 aaPredicted RBP-1.3□□□□□ -2.62
PTPN22-204ENST00000469077 ZZEF1O43149 2961 aa-1.3□□□□□ -2.62
PTPN22-204ENST00000469077 C9orf92A6NGG3 77 aa-1.3□□□□□ -2.62
PTPN22-204ENST00000469077 OOSP1A8MZH6 123 aa-1.3□□□□□ -2.62
PTPN22-204ENST00000469077 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.3□□□□□ -2.62
PTPN22-204ENST00000469077 DPH3P1Q9H4G8 78 aa-1.3□□□□□ -2.62
PTPN22-204ENST00000469077 HIGD1BQ9P298 99 aa-1.3□□□□□ -2.62
PTPN22-204ENST00000469077 SCN7AQ01118 1682 aa-1.3□□□□□ -2.62
PTPN22-204ENST00000469077 A2ML1A8K2U0 1454 aa-1.31□□□□□ -2.62
PTPN22-204ENST00000469077 ROBO1Q9Y6N7 1651 aa-1.31□□□□□ -2.62
PTPN22-204ENST00000469077 SACSQ9NZJ4 4579 aa-1.31□□□□□ -2.62
PTPN22-204ENST00000469077 ATP5EP56381 51 aaPredicted RBP-1.31□□□□□ -2.62
PTPN22-204ENST00000469077 MANBALQ9NQG1 85 aa-1.31□□□□□ -2.62
PTPN22-204ENST00000469077 PRO1854Q9UHT4 67 aa-1.31□□□□□ -2.62
PTPN22-204ENST00000469077 KNL1Q8NG31 2342 aa-1.31□□□□□ -2.62
PTPN22-204ENST00000469077 CLIP1P30622 1438 aa-1.32□□□□□ -2.62
PTPN22-204ENST00000469077 NAIPQ13075 1403 aa-1.32□□□□□ -2.62
PTPN22-204ENST00000469077 PHLPP1O60346 1717 aa-1.32□□□□□ -2.62
PTPN22-204ENST00000469077 TRAPPC2P0DI81 140 aa-1.32□□□□□ -2.62
PTPN22-204ENST00000469077 TRAPPC2BP0DI82 140 aa-1.32□□□□□ -2.62
PTPN22-204ENST00000469077 GNG11P61952 73 aa-1.32□□□□□ -2.62
PTPN22-204ENST00000469077 MT1HP80294 61 aa-1.32□□□□□ -2.62
PTPN22-204ENST00000469077 HEPN1Q6WQI6 88 aa-1.32□□□□□ -2.62
PTPN22-204ENST00000469077 LRRC37AA6NMS7 1700 aa-1.32□□□□□ -2.62
PTPN22-204ENST00000469077 NUP188Q5SRE5 1749 aa-1.32□□□□□ -2.62
PTPN22-204ENST00000469077 SCAPERQ9BY12 1400 aa-1.32□□□□□ -2.62
PTPN22-204ENST00000469077 TRAV30A0A087WSZ9 112 aa-1.33□□□□□ -2.62
PTPN22-204ENST00000469077 A0A087WVE0 104 aa-1.33□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms