RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 Q6JHZ5 121 aa1.63□□□□□ -2.15
XRN1-207ENST00000468894 BAGE3Q86Y29 109 aa1.63□□□□□ -2.15
XRN1-207ENST00000468894 BAGE2Q86Y30 109 aa1.63□□□□□ -2.15
XRN1-207ENST00000468894 C3P01024 1663 aa1.63□□□□□ -2.15
XRN1-207ENST00000468894 ADGRB2O60241 1585 aa1.63□□□□□ -2.15
XRN1-207ENST00000468894 IQGAP2Q13576 1575 aa1.63□□□□□ -2.15
XRN1-207ENST00000468894 TEP1Q99973 2627 aaKnown RBP1.63□□□□□ -2.15
XRN1-207ENST00000468894 LRP6O75581 1613 aa1.62□□□□□ -2.15
XRN1-207ENST00000468894 TRBV6-8A0A0A6YYG3 113 aa1.62□□□□□ -2.15
XRN1-207ENST00000468894 SNRPGP15A8MWD9 76 aa1.62□□□□□ -2.15
XRN1-207ENST00000468894 ELOF1P60002 83 aaKnown RBP1.62□□□□□ -2.15
XRN1-207ENST00000468894 Q86TA4 180 aa1.62□□□□□ -2.15
XRN1-207ENST00000468894 FDCSPQ8NFU4 85 aa1.62□□□□□ -2.15
XRN1-207ENST00000468894 TTTY12Q9BZ98 90 aa1.62□□□□□ -2.15
XRN1-207ENST00000468894 MRPL36Q9P0J6 103 aaKnown RBP1.62□□□□□ -2.15
XRN1-207ENST00000468894 ORMDL1Q9P0S3 153 aa1.62□□□□□ -2.15
XRN1-207ENST00000468894 UBE2D4Q9Y2X8 147 aa1.62□□□□□ -2.15
XRN1-207ENST00000468894 DDX60LQ5H9U9 1706 aaKnown RBP1.62□□□□□ -2.15
XRN1-207ENST00000468894 DOT1LQ8TEK3 1739 aa1.62□□□□□ -2.15
XRN1-207ENST00000468894 CADP27708 2225 aa1.62□□□□□ -2.15
XRN1-207ENST00000468894 ABCA1O95477 2261 aa1.61□□□□□ -2.15
XRN1-207ENST00000468894 HIGD1CA8MV81 97 aa1.61□□□□□ -2.15
XRN1-207ENST00000468894 LEPROTL1O95214 131 aa1.61□□□□□ -2.15
XRN1-207ENST00000468894 IGHV3-30P01768 117 aa1.61□□□□□ -2.15
XRN1-207ENST00000468894 ARMS2P0C7Q2 107 aa1.61□□□□□ -2.15
XRN1-207ENST00000468894 IGHV3-30-5P0DP03 117 aa1.61□□□□□ -2.15
XRN1-207ENST00000468894 GDF5OSQ5U4N7 250 aa1.61□□□□□ -2.15
XRN1-207ENST00000468894 AMELXQ99217 191 aa1.61□□□□□ -2.15
XRN1-207ENST00000468894 SNURFQ9Y675 71 aa1.61□□□□□ -2.15
XRN1-207ENST00000468894 LRRC37A3O60309 1634 aa1.61□□□□□ -2.15
XRN1-207ENST00000468894 MRC1P22897 1456 aa1.61□□□□□ -2.15
XRN1-207ENST00000468894 NAV2Q8IVL1 2488 aa1.61□□□□□ -2.15
XRN1-207ENST00000468894 TNRC18O15417 2968 aaPredicted RBP1.61□□□□□ -2.15
XRN1-207ENST00000468894 ANKRD11Q6UB99 2663 aaPredicted RBP1.61□□□□□ -2.15
XRN1-207ENST00000468894 LY75O60449 1722 aa1.6□□□□□ -2.15
XRN1-207ENST00000468894 NRXN3Q9Y4C0 1643 aa1.6□□□□□ -2.15
XRN1-207ENST00000468894 PPP1R17O96001 155 aa1.6□□□□□ -2.15
XRN1-207ENST00000468894 IFI27P40305 119 aaPredicted RBP1.6□□□□□ -2.15
XRN1-207ENST00000468894 SPAG11BQ08648 103 aa1.6□□□□□ -2.15
XRN1-207ENST00000468894 TPRXLQ17RH7 258 aa1.6□□□□□ -2.15
XRN1-207ENST00000468894 SPAG11AQ6PDA7 123 aa1.6□□□□□ -2.15
XRN1-207ENST00000468894 PATE1Q8WXA2 126 aa1.6□□□□□ -2.15
XRN1-207ENST00000468894 TXNDC17Q9BRA2 123 aa1.6□□□□□ -2.15
XRN1-207ENST00000468894 PRR15LQ9BU68 103 aa1.6□□□□□ -2.15
XRN1-207ENST00000468894 GNG13Q9P2W3 67 aa1.6□□□□□ -2.15
XRN1-207ENST00000468894 LENEPQ9Y5L5 61 aa1.6□□□□□ -2.15
XRN1-207ENST00000468894 LAMA2P24043 3122 aaKnown RBP1.6□□□□□ -2.15
XRN1-207ENST00000468894 MYO18BQ8IUG5 2567 aa1.6□□□□□ -2.15
XRN1-207ENST00000468894 FLNBO75369 2602 aaKnown RBP1.6□□□□□ -2.15
XRN1-207ENST00000468894 ZMYM4Q5VZL5 1548 aa1.6□□□□□ -2.15
XRN1-207ENST00000468894 SZT2Q5T011 3432 aa1.59□□□□□ -2.15
XRN1-207ENST00000468894 IGKV3D-7A0A0C4DH55 119 aa1.59□□□□□ -2.15
XRN1-207ENST00000468894 IGKV3OR2-268A0A0C4DH90 116 aa1.59□□□□□ -2.15
XRN1-207ENST00000468894 IGLV3-1P01715 115 aa1.59□□□□□ -2.15
XRN1-207ENST00000468894 SAA2P0DJI9 122 aaPredicted RBP1.59□□□□□ -2.15
XRN1-207ENST00000468894 SPACA4Q8TDM5 124 aa1.59□□□□□ -2.15
XRN1-207ENST00000468894 EIF2AK4Q9P2K8 1649 aaKnown RBP1.58□□□□□ -2.16
XRN1-207ENST00000468894 ANKRD50Q9ULJ7 1429 aa1.58□□□□□ -2.16
XRN1-207ENST00000468894 F5P12259 2224 aa1.58□□□□□ -2.16
XRN1-207ENST00000468894 ASH1LQ9NR48 2969 aaKnown RBP1.58□□□□□ -2.16
XRN1-207ENST00000468894 A0A087WVE0 104 aa1.58□□□□□ -2.16
XRN1-207ENST00000468894 A0A0D9SFI3 127 aa1.58□□□□□ -2.16
XRN1-207ENST00000468894 A0A0G2JQZ4 141 aa1.58□□□□□ -2.16
XRN1-207ENST00000468894 D6R8Y8 96 aa1.58□□□□□ -2.16
XRN1-207ENST00000468894 M0R3E3 92 aa1.58□□□□□ -2.16
XRN1-207ENST00000468894 HMGA1P17096 107 aaKnown RBP1.58□□□□□ -2.16
XRN1-207ENST00000468894 SSBP1Q04837 148 aaKnown RBP1.58□□□□□ -2.16
XRN1-207ENST00000468894 NCBP2-AS2Q69YL0 99 aa1.58□□□□□ -2.16
XRN1-207ENST00000468894 MUSTN1Q8IVN3 82 aa1.58□□□□□ -2.16
XRN1-207ENST00000468894 PPP1R1CQ8WVI7 109 aa1.58□□□□□ -2.16
XRN1-207ENST00000468894 SAMD9Q5K651 1589 aa1.58□□□□□ -2.16
XRN1-207ENST00000468894 FAM208AQ9UK61 1670 aaKnown RBP1.58□□□□□ -2.16
XRN1-207ENST00000468894 BDP1A6H8Y1 2624 aa1.57□□□□□ -2.16
XRN1-207ENST00000468894 ATP7BP35670 1465 aa1.57□□□□□ -2.16
XRN1-207ENST00000468894 AGLP35573 1532 aa1.57□□□□□ -2.16
XRN1-207ENST00000468894 TRBV7-4A0A0J9YYF1 115 aa1.57□□□□□ -2.16
XRN1-207ENST00000468894 TRBV6-5A0A0K0K1A5 114 aa1.57□□□□□ -2.16
XRN1-207ENST00000468894 CCL3L1P16619 93 aa1.57□□□□□ -2.16
XRN1-207ENST00000468894 PDE6GP18545 87 aa1.57□□□□□ -2.16
XRN1-207ENST00000468894 DEFB132Q7Z7B7 95 aa1.57□□□□□ -2.16
XRN1-207ENST00000468894 ABCA2Q9BZC7 2435 aa1.57□□□□□ -2.16
XRN1-207ENST00000468894 EYSQ5T1H1 3165 aa1.57□□□□□ -2.16
XRN1-207ENST00000468894 CPS1P31327 1500 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 EFCAB6Q5THR3 1501 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 IQGAP1P46940 1657 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 PIEZO1Q92508 2521 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 TRBV6-4A0A1B0GX49 114 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 LINC01549A6NIU2 74 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 ATXN8Q156A1 80 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 ATP5EP2Q5VTU8 51 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 DEFB107AQ8IZN7 70 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 ZNF563Q8TA94 476 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 PLAC8Q9NZF1 115 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 EPG5Q9HCE0 2579 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 COL4A2P08572 1712 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 QSER1Q2KHR3 1735 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 TNCP24821 2201 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 GOLGA4Q13439 2230 aaKnown RBP1.56□□□□□ -2.16
XRN1-207ENST00000468894 PLXNB2O15031 1838 aa1.56□□□□□ -2.16
XRN1-207ENST00000468894 CACNA1BQ00975 2339 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms