RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 CFC1P0CG37 223 aa5.99□□□□□ -1.45
NEDD9-207ENST00000468612 COX6B2Q6YFQ2 88 aa5.99□□□□□ -1.45
NEDD9-207ENST00000468612 Q6ZN92 141 aa5.99□□□□□ -1.45
NEDD9-207ENST00000468612 CBLN2Q8IUK8 224 aa5.99□□□□□ -1.45
NEDD9-207ENST00000468612 NKAPP1Q8N9T2 125 aa5.99□□□□□ -1.45
NEDD9-207ENST00000468612 OCC1Q8TAD7 63 aa5.99□□□□□ -1.45
NEDD9-207ENST00000468612 A0A1B0GUT8 65 aa5.98□□□□□ -1.45
NEDD9-207ENST00000468612 TMEM238C9JI98 176 aa5.98□□□□□ -1.45
NEDD9-207ENST00000468612 GATCO43716 136 aaKnown RBP5.98□□□□□ -1.45
NEDD9-207ENST00000468612 BORCS7Q96B45 105 aa5.98□□□□□ -1.45
NEDD9-207ENST00000468612 IGLV4-3A0A075B6K6 122 aa5.97□□□□□ -1.45
NEDD9-207ENST00000468612 M0R378 163 aa5.97□□□□□ -1.45
NEDD9-207ENST00000468612 SLC25A20O43772 301 aa5.97□□□□□ -1.45
NEDD9-207ENST00000468612 C20orf78Q9BR46 151 aa5.97□□□□□ -1.45
NEDD9-207ENST00000468612 ALKBH7Q9BT30 221 aaPredicted RBP5.97□□□□□ -1.45
NEDD9-207ENST00000468612 ARPC5O15511 151 aa5.96□□□□□ -1.46
NEDD9-207ENST00000468612 CT83Q5H943 113 aa5.96□□□□□ -1.46
NEDD9-207ENST00000468612 FAM231DQ6ZW35 169 aa5.96□□□□□ -1.46
NEDD9-207ENST00000468612 HIGD2AQ9BW72 106 aa5.96□□□□□ -1.46
NEDD9-207ENST00000468612 TRBV24-1A0A075B6N3 115 aa5.95□□□□□ -1.46
NEDD9-207ENST00000468612 HIGD1CA8MV81 97 aa5.95□□□□□ -1.46
NEDD9-207ENST00000468612 KRTAP9-8Q9BYQ0 159 aa5.95□□□□□ -1.46
NEDD9-207ENST00000468612 PYGO1Q9Y3Y4 419 aa5.95□□□□□ -1.46
NEDD9-207ENST00000468612 IFI27P40305 119 aaPredicted RBP5.94□□□□□ -1.46
NEDD9-207ENST00000468612 MRPL51Q4U2R6 128 aaKnown RBP5.94□□□□□ -1.46
NEDD9-207ENST00000468612 TMEM141Q96I45 108 aa5.94□□□□□ -1.46
NEDD9-207ENST00000468612 SMIM2Q9BVW6 85 aa5.94□□□□□ -1.46
NEDD9-207ENST00000468612 EIF5A2Q9GZV4 153 aaKnown RBP5.93□□□□□ -1.46
NEDD9-207ENST00000468612 ZNF706Q9Y5V0 76 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-207ENST00000468612 CXCL5P42830 114 aa5.92□□□□□ -1.46
NEDD9-207ENST00000468612 ZC2HC1BQ5TFG8 222 aa5.92□□□□□ -1.46
NEDD9-207ENST00000468612 FAM104BQ5XKR9 115 aa5.92□□□□□ -1.46
NEDD9-207ENST00000468612 TEX43Q6ZNM6 134 aa5.92□□□□□ -1.46
NEDD9-207ENST00000468612 GEMIN7Q9H840 131 aaKnown RBP5.92□□□□□ -1.46
NEDD9-207ENST00000468612 LINC00862A6NCI5 91 aa5.91□□□□□ -1.46
NEDD9-207ENST00000468612 FAM19A3Q7Z5A8 133 aa5.91□□□□□ -1.46
NEDD9-207ENST00000468612 NDUFA13Q9P0J0 144 aa5.91□□□□□ -1.46
NEDD9-207ENST00000468612 LCE2BO14633 110 aa5.9□□□□□ -1.46
NEDD9-207ENST00000468612 VPREB1P12018 145 aa5.9□□□□□ -1.46
NEDD9-207ENST00000468612 RIGQ13278 110 aa5.9□□□□□ -1.46
NEDD9-207ENST00000468612 KRTAP6-3Q3LI67 103 aa5.9□□□□□ -1.46
NEDD9-207ENST00000468612 AMELXQ99217 191 aa5.9□□□□□ -1.46
NEDD9-207ENST00000468612 C2orf88Q9BSF0 95 aa5.9□□□□□ -1.46
NEDD9-207ENST00000468612 CDKN2A-AS1Q9UH64 79 aa5.9□□□□□ -1.46
NEDD9-207ENST00000468612 TEX46H3BTG2 121 aa5.89□□□□□ -1.47
NEDD9-207ENST00000468612 ZNF345Q14585 488 aa5.89□□□□□ -1.47
NEDD9-207ENST00000468612 LINC00483Q53H64 154 aa5.89□□□□□ -1.47
NEDD9-207ENST00000468612 LINC01551Q86U37 167 aa5.89□□□□□ -1.47
NEDD9-207ENST00000468612 NEBP20929 6669 aa5.89□□□□□ -1.47
NEDD9-207ENST00000468612 C9orf92A6NGG3 77 aa5.88□□□□□ -1.47
NEDD9-207ENST00000468612 CKS2P33552 79 aa5.88□□□□□ -1.47
NEDD9-207ENST00000468612 RAB5BP61020 215 aa5.88□□□□□ -1.47
NEDD9-207ENST00000468612 MOBPQ13875 183 aa5.88□□□□□ -1.47
NEDD9-207ENST00000468612 SSBP3-AS1Q7Z2R9 100 aa5.88□□□□□ -1.47
NEDD9-207ENST00000468612 C2orf66Q6UXQ4 117 aa5.87□□□□□ -1.47
NEDD9-207ENST00000468612 NPYP01303 97 aa5.86□□□□□ -1.47
NEDD9-207ENST00000468612 HERVK_113P63121 156 aa5.86□□□□□ -1.47
NEDD9-207ENST00000468612 IGLV9-49A0A0B4J1Y8 123 aa5.85□□□□□ -1.47
NEDD9-207ENST00000468612 SMIM1B2RUZ4 78 aa5.85□□□□□ -1.47
NEDD9-207ENST00000468612 D6R8Y8 96 aa5.85□□□□□ -1.47
NEDD9-207ENST00000468612 TAGLN2P37802 199 aaKnown RBP5.85□□□□□ -1.47
NEDD9-207ENST00000468612 Q8NDZ9 215 aa5.85□□□□□ -1.47
NEDD9-207ENST00000468612 COX7B2Q8TF08 81 aa5.85□□□□□ -1.47
NEDD9-207ENST00000468612 VCX2Q9H322 139 aa5.85□□□□□ -1.47
NEDD9-207ENST00000468612 KANTRA0A1W2PQU2 76 aa5.84□□□□□ -1.47
NEDD9-207ENST00000468612 SMLR1H3BR10 107 aa5.84□□□□□ -1.47
NEDD9-207ENST00000468612 RAB5AP20339 215 aa5.84□□□□□ -1.47
NEDD9-207ENST00000468612 SMCR5Q8TEV8 140 aa5.84□□□□□ -1.47
NEDD9-207ENST00000468612 SEC11AP67812 179 aa5.83□□□□□ -1.48
NEDD9-207ENST00000468612 RPL24P83731 157 aaKnown RBP5.83□□□□□ -1.48
NEDD9-207ENST00000468612 PDZD11Q5EBL8 140 aa5.83□□□□□ -1.48
NEDD9-207ENST00000468612 OSTCQ9NRP0 149 aa5.83□□□□□ -1.48
NEDD9-207ENST00000468612 TMEM250H0YL14 139 aa5.82□□□□□ -1.48
NEDD9-207ENST00000468612 NPSP0C0P6 89 aa5.82□□□□□ -1.48
NEDD9-207ENST00000468612 SND1-IT1Q9HBX3 110 aa5.82□□□□□ -1.48
NEDD9-207ENST00000468612 V9GYV3 84 aa5.82□□□□□ -1.48
NEDD9-207ENST00000468612 GAGE2AQ6NT46 116 aa5.81□□□□□ -1.48
NEDD9-207ENST00000468612 AKAP14Q86UN6 197 aa5.81□□□□□ -1.48
NEDD9-207ENST00000468612 CYSLTR1Q9Y271 337 aa5.81□□□□□ -1.48
NEDD9-207ENST00000468612 IGIPA6NJ69 53 aa5.8□□□□□ -1.48
NEDD9-207ENST00000468612 HMSDA8MTL9 139 aa5.8□□□□□ -1.48
NEDD9-207ENST00000468612 IGLV6-57P01721 117 aa5.8□□□□□ -1.48
NEDD9-207ENST00000468612 MT2AP02795 61 aa5.8□□□□□ -1.48
NEDD9-207ENST00000468612 PFN2P35080 140 aa5.8□□□□□ -1.48
NEDD9-207ENST00000468612 RPL37P61927 97 aaKnown RBP5.8□□□□□ -1.48
NEDD9-207ENST00000468612 NAT8BQ9UHF3 227 aa5.8□□□□□ -1.48
NEDD9-207ENST00000468612 A0A1B0GW15 77 aa5.79□□□□□ -1.48
NEDD9-207ENST00000468612 PPBPP02775 128 aa5.79□□□□□ -1.48
NEDD9-207ENST00000468612 RAB14P61106 215 aa5.79□□□□□ -1.48
NEDD9-207ENST00000468612 KRTAP19-6Q3LI70 58 aa5.79□□□□□ -1.48
NEDD9-207ENST00000468612 FAM74A3Q4VXF1 159 aa5.79□□□□□ -1.48
NEDD9-207ENST00000468612 KRTAP9-3Q9BYQ3 159 aa5.79□□□□□ -1.48
NEDD9-207ENST00000468612 LINC00846Q9NV44 126 aa5.79□□□□□ -1.48
NEDD9-207ENST00000468612 MUC12Q9UKN1 5478 aa5.78□□□□□ -1.48
NEDD9-207ENST00000468612 SPRR1AP35321 89 aa5.78□□□□□ -1.48
NEDD9-207ENST00000468612 Q6Q795 121 aa5.78□□□□□ -1.48
NEDD9-207ENST00000468612 IGLV5-45A0A087WSX0 123 aa5.77□□□□□ -1.49
NEDD9-207ENST00000468612 LOC389332A0A1B0GUA5 103 aa5.77□□□□□ -1.49
NEDD9-207ENST00000468612 PRSS47A8MTI9 375 aa5.77□□□□□ -1.49
NEDD9-207ENST00000468612 ATP5LO75964 103 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms