RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 NBEAL2Q6ZNJ1 2754 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 MALP21145 153 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 PIK3CD-AS1Q5SR53 167 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 S100A7L2Q5SY68 101 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 TMEM126AQ9H061 195 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 SPANXA1Q9NS26 97 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 PKD1L1Q8TDX9 2849 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 SDIM1Q6ZPB5 146 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 SND1-IT1Q9HBX3 110 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 C14orf132Q9NPU4 83 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 SVEP1Q4LDE5 3571 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 TRBV30A0A0K0K1B3 111 aa4.27□□□□□ -1.73
SHQ1-205ENST00000468371 ADAMTSL4-AS1Q5T5F5 129 aa4.27□□□□□ -1.73
SHQ1-205ENST00000468371 C1orf134Q5TEV5 83 aa4.27□□□□□ -1.73
SHQ1-205ENST00000468371 POM121L12Q8N7R1 296 aa4.27□□□□□ -1.73
SHQ1-205ENST00000468371 TMEM243Q9BU79 118 aa4.27□□□□□ -1.73
SHQ1-205ENST00000468371 LCE6AA0A183 80 aa4.27□□□□□ -1.73
SHQ1-205ENST00000468371 LECT2O14960 151 aa4.27□□□□□ -1.73
SHQ1-205ENST00000468371 HAMPP81172 84 aa4.27□□□□□ -1.73
SHQ1-205ENST00000468371 PRO0255Q9UI72 69 aa4.27□□□□□ -1.73
SHQ1-205ENST00000468371 TRAV13-2A0A0B4J235 113 aa4.26□□□□□ -1.73
SHQ1-205ENST00000468371 ACYP1P07311 99 aa4.26□□□□□ -1.73
SHQ1-205ENST00000468371 MIR7-3HGQ8N6C7 128 aa4.26□□□□□ -1.73
SHQ1-205ENST00000468371 TENM3Q9P273 2699 aa4.26□□□□□ -1.73
SHQ1-205ENST00000468371 SLPIP03973 132 aa4.26□□□□□ -1.73
SHQ1-205ENST00000468371 XCL1P47992 114 aa4.26□□□□□ -1.73
SHQ1-205ENST00000468371 RMI2Q96E14 147 aa4.26□□□□□ -1.73
SHQ1-205ENST00000468371 GYPEP15421 78 aa4.26□□□□□ -1.73
SHQ1-205ENST00000468371 KLK9Q2XQG4 91 aa4.26□□□□□ -1.73
SHQ1-205ENST00000468371 LINC00308Q8TCZ7 52 aa4.26□□□□□ -1.73
SHQ1-205ENST00000468371 VWFP04275 2813 aa4.25□□□□□ -1.73
SHQ1-205ENST00000468371 LINC00643Q86TS7 51 aa4.25□□□□□ -1.73
SHQ1-205ENST00000468371 hADV29S1A0JD25 119 aa4.25□□□□□ -1.73
SHQ1-205ENST00000468371 LST1O00453 97 aa4.25□□□□□ -1.73
SHQ1-205ENST00000468371 COX7A2LO14548 114 aa4.25□□□□□ -1.73
SHQ1-205ENST00000468371 VPS13CQ709C8 3753 aa4.25□□□□□ -1.73
SHQ1-205ENST00000468371 KLLNB2CW77 178 aa4.25□□□□□ -1.73
SHQ1-205ENST00000468371 RBMY1FQ15415 496 aaKnown RBP4.25□□□□□ -1.73
SHQ1-205ENST00000468371 Q6ZTI0 123 aa4.25□□□□□ -1.73
SHQ1-205ENST00000468371 TRBV6-5A0A0K0K1A5 114 aa4.24□□□□□ -1.73
SHQ1-205ENST00000468371 LINC00476Q8WZB0 136 aa4.24□□□□□ -1.73
SHQ1-205ENST00000468371 LINC01546A6NGU7 62 aa4.24□□□□□ -1.73
SHQ1-205ENST00000468371 ODF3Q96PU9 254 aa4.24□□□□□ -1.73
SHQ1-205ENST00000468371 ATOX1O00244 68 aa4.24□□□□□ -1.73
SHQ1-205ENST00000468371 LINC00694P0DN24 101 aa4.24□□□□□ -1.73
SHQ1-205ENST00000468371 C1orf158Q8N1D5 194 aa4.24□□□□□ -1.73
SHQ1-205ENST00000468371 DNAJC30Q96LL9 226 aa4.24□□□□□ -1.73
SHQ1-205ENST00000468371 AKAP9Q99996 3911 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 IGLV10-54A0A075B6I4 117 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 J3KT08 172 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 NCR3O14931 201 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 Q8NAQ8 132 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 COX7B2Q8TF08 81 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 UBL5Q9BZL1 73 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 TRAV23DV6A0A075B6W5 121 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 C3orf22Q8N5N4 141 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 CELA1Q9UNI1 258 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 UQCRQO14949 82 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 TIRAPP58753 221 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 SS18Q15532 418 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 C9orf85Q96MD7 179 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 ORMDL1Q9P0S3 153 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 X6R8D5 127 aa4.23□□□□□ -1.73
SHQ1-205ENST00000468371 Q9UF83 564 aa4.22□□□□□ -1.73
SHQ1-205ENST00000468371 KIF25-AS1Q9Y6Z4 181 aa4.22□□□□□ -1.73
SHQ1-205ENST00000468371 ANK3Q12955 4377 aaKnown RBP4.22□□□□□ -1.73
SHQ1-205ENST00000468371 LOC107984640A0A0U1RRK4 108 aa4.22□□□□□ -1.73
SHQ1-205ENST00000468371 K7EQD1 137 aa4.22□□□□□ -1.73
SHQ1-205ENST00000468371 M0QXV9 152 aa4.22□□□□□ -1.73
SHQ1-205ENST00000468371 LINC00315P59091 139 aa4.22□□□□□ -1.73
SHQ1-205ENST00000468371 MRPS36P82909 103 aaKnown RBP4.22□□□□□ -1.73
SHQ1-205ENST00000468371 UBE2D4Q9Y2X8 147 aa4.22□□□□□ -1.73
SHQ1-205ENST00000468371 SPANXDQ9BXN6 97 aa4.22□□□□□ -1.73
SHQ1-205ENST00000468371 SPANXCQ9NY87 97 aa4.22□□□□□ -1.73
SHQ1-205ENST00000468371 A0A087WVE0 104 aa4.21□□□□□ -1.73
SHQ1-205ENST00000468371 NDUFA1O15239 70 aa4.21□□□□□ -1.73
SHQ1-205ENST00000468371 COX6A2Q02221 97 aa4.21□□□□□ -1.73
SHQ1-205ENST00000468371 ZNF575Q86XF7 245 aa4.21□□□□□ -1.73
SHQ1-205ENST00000468371 IGKV2D-24A0A075B6R9 120 aa4.21□□□□□ -1.74
SHQ1-205ENST00000468371 Q6ZSN1 163 aa4.21□□□□□ -1.74
SHQ1-205ENST00000468371 PPDPFQ9H3Y8 114 aa4.21□□□□□ -1.74
SHQ1-205ENST00000468371 PYGO1Q9Y3Y4 419 aa4.21□□□□□ -1.74
SHQ1-205ENST00000468371 LINC00336Q6ZUF6 198 aa4.21□□□□□ -1.74
SHQ1-205ENST00000468371 H0YGX0 51 aa4.2□□□□□ -1.74
SHQ1-205ENST00000468371 Q6Q795 121 aa4.2□□□□□ -1.74
SHQ1-205ENST00000468371 ANGP03950 147 aaKnown RBP4.2□□□□□ -1.74
SHQ1-205ENST00000468371 C20orf197Q8N268 126 aa4.2□□□□□ -1.74
SHQ1-205ENST00000468371 MUC4Q99102 2169 aa4.2□□□□□ -1.74
SHQ1-205ENST00000468371 GHRHP01286 108 aa4.2□□□□□ -1.74
SHQ1-205ENST00000468371 LOC100131303A0A0U1RQF7 123 aa4.19□□□□□ -1.74
SHQ1-205ENST00000468371 C16orf90A8MZG2 172 aa4.19□□□□□ -1.74
SHQ1-205ENST00000468371 RBM3P98179 157 aaKnown RBP4.19□□□□□ -1.74
SHQ1-205ENST00000468371 LINC00242Q5T6M2 205 aa4.19□□□□□ -1.74
SHQ1-205ENST00000468371 C1orf43Q9BWL3 253 aa4.19□□□□□ -1.74
SHQ1-205ENST00000468371 C6orf223Q8N319 242 aa4.19□□□□□ -1.74
SHQ1-205ENST00000468371 SMIM11BQ8TCY0 68 aa4.18□□□□□ -1.74
SHQ1-205ENST00000468371 DSCR8Q96T75 97 aa4.18□□□□□ -1.74
SHQ1-205ENST00000468371 CHCHD7Q9BUK0 85 aa4.18□□□□□ -1.74
SHQ1-205ENST00000468371 ZNF469Q96JG9 3925 aaPredicted RBP4.18□□□□□ -1.74
SHQ1-205ENST00000468371 COX7CP15954 63 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms