RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 NTN5Q8WTR8 489 aaPredicted RBP8.57□□□□□ -1.04
COL4A1-202ENST00000467182 M0R2N4 97 aa8.56□□□□□ -1.04
COL4A1-202ENST00000467182 PRSS2P07478 247 aa8.56□□□□□ -1.04
COL4A1-202ENST00000467182 HERV-K104P63124 156 aa8.56□□□□□ -1.04
COL4A1-202ENST00000467182 SCGB1D4Q6XE38 83 aa8.56□□□□□ -1.04
COL4A1-202ENST00000467182 LINC00526Q96FQ7 95 aa8.56□□□□□ -1.04
COL4A1-202ENST00000467182 TM2D2Q9BX73 214 aa8.56□□□□□ -1.04
COL4A1-202ENST00000467182 SPANXB1Q9NS25 103 aaPredicted RBP8.56□□□□□ -1.04
COL4A1-202ENST00000467182 COX11Q9Y6N1 276 aa8.56□□□□□ -1.04
COL4A1-202ENST00000467182 USP17L23D6RBM5 183 aa8.55□□□□□ -1.04
COL4A1-202ENST00000467182 TIMM17BO60830 172 aa8.55□□□□□ -1.04
COL4A1-202ENST00000467182 CXCL5P42830 114 aa8.55□□□□□ -1.04
COL4A1-202ENST00000467182 WFDC2Q14508 124 aa8.55□□□□□ -1.04
COL4A1-202ENST00000467182 HIGD2BQ4VC39 106 aa8.55□□□□□ -1.04
COL4A1-202ENST00000467182 ADAMTSL4-AS1Q5T5F5 129 aa8.55□□□□□ -1.04
COL4A1-202ENST00000467182 C10orf25Q5T742 122 aa8.55□□□□□ -1.04
COL4A1-202ENST00000467182 CFAP161Q6P656 301 aa8.55□□□□□ -1.04
COL4A1-202ENST00000467182 SFTA2Q6UW10 78 aa8.54□□□□□ -1.04
COL4A1-202ENST00000467182 UNQ6190/PRO20217Q6UXQ8 127 aa8.54□□□□□ -1.04
COL4A1-202ENST00000467182 FRAS1Q86XX4 4008 aa8.53□□□□□ -1.04
COL4A1-202ENST00000467182 HSD52Q0P140 79 aa8.53□□□□□ -1.04
COL4A1-202ENST00000467182 C2orf48Q96LS8 159 aa8.53□□□□□ -1.04
COL4A1-202ENST00000467182 LRCOL1A6NCL2 159 aa8.52□□□□□ -1.05
COL4A1-202ENST00000467182 SMIM13P0DJ93 91 aa8.52□□□□□ -1.05
COL4A1-202ENST00000467182 CKS1BP61024 79 aa8.52□□□□□ -1.05
COL4A1-202ENST00000467182 TAL2Q16559 108 aa8.52□□□□□ -1.05
COL4A1-202ENST00000467182 SPANXDQ9BXN6 97 aa8.52□□□□□ -1.05
COL4A1-202ENST00000467182 SPANXCQ9NY87 97 aa8.52□□□□□ -1.05
COL4A1-202ENST00000467182 TMEM238C9JI98 176 aa8.51□□□□□ -1.05
COL4A1-202ENST00000467182 ZNF561-AS1K7EIQ3 104 aa8.51□□□□□ -1.05
COL4A1-202ENST00000467182 LECT2O14960 151 aa8.51□□□□□ -1.05
COL4A1-202ENST00000467182 SLPIP03973 132 aa8.51□□□□□ -1.05
COL4A1-202ENST00000467182 BVES-AS1Q5T3Y7 98 aa8.51□□□□□ -1.05
COL4A1-202ENST00000467182 Q6ZRU5 148 aa8.51□□□□□ -1.05
COL4A1-202ENST00000467182 C6orf48Q9UBA6 75 aa8.51□□□□□ -1.05
COL4A1-202ENST00000467182 F8WDY8 70 aa8.5□□□□□ -1.05
COL4A1-202ENST00000467182 EREGO14944 169 aa8.5□□□□□ -1.05
COL4A1-202ENST00000467182 HINT1P49773 126 aaPredicted RBP8.5□□□□□ -1.05
COL4A1-202ENST00000467182 C9orf116Q5BN46 136 aaPredicted RBP8.5□□□□□ -1.05
COL4A1-202ENST00000467182 MEIG1Q5JSS6 88 aa8.5□□□□□ -1.05
COL4A1-202ENST00000467182 HIST1H4GQ99525 98 aa8.5□□□□□ -1.05
COL4A1-202ENST00000467182 SNHG12Q9BXW3 62 aa8.5□□□□□ -1.05
COL4A1-202ENST00000467182 ERG28Q9UKR5 140 aa8.5□□□□□ -1.05
COL4A1-202ENST00000467182 A0A0U1RRA0 63 aa8.49□□□□□ -1.05
COL4A1-202ENST00000467182 PSCAO43653 123 aa8.49□□□□□ -1.05
COL4A1-202ENST00000467182 EIF4EBP3O60516 100 aaPredicted RBP8.49□□□□□ -1.05
COL4A1-202ENST00000467182 CEND1Q8N111 149 aa8.49□□□□□ -1.05
COL4A1-202ENST00000467182 DAND5Q8N907 189 aa8.49□□□□□ -1.05
COL4A1-202ENST00000467182 CAMK2N2Q96S95 79 aa8.49□□□□□ -1.05
COL4A1-202ENST00000467182 DNAH11Q96DT5 4516 aa8.49□□□□□ -1.05
COL4A1-202ENST00000467182 RYR2Q92736 4967 aa8.49□□□□□ -1.05
COL4A1-202ENST00000467182 TRBV30A0A0K0K1B3 111 aa8.48□□□□□ -1.05
COL4A1-202ENST00000467182 FXYD2P54710 66 aa8.48□□□□□ -1.05
COL4A1-202ENST00000467182 SRSF9Q13242 221 aaKnown RBP eCLIP8.48□□□□□ -1.05
COL4A1-202ENST00000467182 SOSTDC1Q6X4U4 206 aa8.48□□□□□ -1.05
COL4A1-202ENST00000467182 MUSTN1Q8IVN3 82 aa8.48□□□□□ -1.05
COL4A1-202ENST00000467182 M0R143 59 aa8.47□□□□□ -1.05
COL4A1-202ENST00000467182 GCSHP23434 173 aa8.47□□□□□ -1.05
COL4A1-202ENST00000467182 PFN2P35080 140 aa8.47□□□□□ -1.05
COL4A1-202ENST00000467182 PTTG1IPP53801 180 aa8.47□□□□□ -1.05
COL4A1-202ENST00000467182 SYCNQ0VAF6 134 aa8.47□□□□□ -1.05
COL4A1-202ENST00000467182 CIRBPQ14011 172 aaKnown RBP8.47□□□□□ -1.05
COL4A1-202ENST00000467182 Q6ZVH6 145 aa8.47□□□□□ -1.05
COL4A1-202ENST00000467182 MIR7-3HGQ8N6C7 128 aa8.47□□□□□ -1.05
COL4A1-202ENST00000467182 LINC00158P58513 81 aa8.46□□□□□ -1.06
COL4A1-202ENST00000467182 COX17Q14061 63 aa8.46□□□□□ -1.06
COL4A1-202ENST00000467182 LINC00308Q8TCZ7 52 aa8.46□□□□□ -1.06
COL4A1-202ENST00000467182 FAT2Q9NYQ8 4349 aa8.46□□□□□ -1.06
COL4A1-202ENST00000467182 LCE6AA0A183 80 aa8.45□□□□□ -1.06
COL4A1-202ENST00000467182 IFITM1P13164 125 aa8.45□□□□□ -1.06
COL4A1-202ENST00000467182 NPC2P61916 151 aa8.45□□□□□ -1.06
COL4A1-202ENST00000467182 RNF151Q2KHN1 245 aa8.45□□□□□ -1.06
COL4A1-202ENST00000467182 C1orf134Q5TEV5 83 aa8.45□□□□□ -1.06
COL4A1-202ENST00000467182 CARD19Q96LW7 228 aa8.45□□□□□ -1.06
COL4A1-202ENST00000467182 PPDPFQ9H3Y8 114 aa8.45□□□□□ -1.06
COL4A1-202ENST00000467182 HECTD4Q9Y4D8 3996 aa8.45□□□□□ -1.06
COL4A1-202ENST00000467182 CNBPP62633 177 aaKnown RBP8.44□□□□□ -1.06
COL4A1-202ENST00000467182 BATFQ16520 125 aa8.44□□□□□ -1.06
COL4A1-202ENST00000467182 DNAH5Q8TE73 4624 aa8.43□□□□□ -1.06
COL4A1-202ENST00000467182 A0A087WTM6 91 aa8.43□□□□□ -1.06
COL4A1-202ENST00000467182 LOC107984156A0A0G2JMH3 177 aa8.43□□□□□ -1.06
COL4A1-202ENST00000467182 C14orf177Q52M58 125 aa8.43□□□□□ -1.06
COL4A1-202ENST00000467182 ARL17AQ8IVW1 177 aa8.43□□□□□ -1.06
COL4A1-202ENST00000467182 A0A1B0GWB2 263 aa8.42□□□□□ -1.06
COL4A1-202ENST00000467182 A4D1N5 150 aa8.42□□□□□ -1.06
COL4A1-202ENST00000467182 RTL8CO15255 209 aa8.42□□□□□ -1.06
COL4A1-202ENST00000467182 Q8N814 137 aa8.42□□□□□ -1.06
COL4A1-202ENST00000467182 KMT2CQ8NEZ4 4911 aaKnown RBP8.42□□□□□ -1.06
COL4A1-202ENST00000467182 TLX1NBP0CAT3 122 aa8.41□□□□□ -1.06
COL4A1-202ENST00000467182 SND1-IT1Q9HBX3 110 aa8.41□□□□□ -1.06
COL4A1-202ENST00000467182 NDUFC2-KCTD14E9PQ53 114 aa8.4□□□□□ -1.06
COL4A1-202ENST00000467182 RPL24P83731 157 aaKnown RBP8.4□□□□□ -1.06
COL4A1-202ENST00000467182 Q6ZRP5 223 aa8.4□□□□□ -1.06
COL4A1-202ENST00000467182 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.39□□□□□ -1.07
COL4A1-202ENST00000467182 K7ERJ3 54 aa8.39□□□□□ -1.07
COL4A1-202ENST00000467182 CFC1BP0CG36 223 aa8.39□□□□□ -1.07
COL4A1-202ENST00000467182 CFC1P0CG37 223 aa8.39□□□□□ -1.07
COL4A1-202ENST00000467182 TNP2Q05952 138 aa8.39□□□□□ -1.07
COL4A1-202ENST00000467182 Q8NDZ9 215 aa8.39□□□□□ -1.07
COL4A1-202ENST00000467182 NHP2Q9NX24 153 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms