RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 SPCS1Q9Y6A9 102 aa0.86□□□□□ -2.27
CDC42BPA-211ENST00000466538 C1orf167Q5SNV9 1468 aa0.86□□□□□ -2.27
CDC42BPA-211ENST00000466538 LRP6O75581 1613 aa0.86□□□□□ -2.27
CDC42BPA-211ENST00000466538 CUX1P39880 1505 aa0.85□□□□□ -2.27
CDC42BPA-211ENST00000466538 C5P01031 1676 aa0.85□□□□□ -2.27
CDC42BPA-211ENST00000466538 A0A087WVE0 104 aa0.85□□□□□ -2.27
CDC42BPA-211ENST00000466538 ARMS2P0C7Q2 107 aa0.85□□□□□ -2.27
CDC42BPA-211ENST00000466538 GNGT1P63211 74 aa0.85□□□□□ -2.27
CDC42BPA-211ENST00000466538 NMSQ5H8A3 153 aa0.85□□□□□ -2.27
CDC42BPA-211ENST00000466538 XRN1Q8IZH2 1706 aaKnown RBP0.85□□□□□ -2.27
CDC42BPA-211ENST00000466538 ST20Q9HBF5 79 aa0.85□□□□□ -2.27
CDC42BPA-211ENST00000466538 RGPD2P0DJD1 1756 aa0.85□□□□□ -2.27
CDC42BPA-211ENST00000466538 USP24Q9UPU5 2620 aa0.85□□□□□ -2.27
CDC42BPA-211ENST00000466538 ZNF831Q5JPB2 1677 aa0.84□□□□□ -2.27
CDC42BPA-211ENST00000466538 ANKRD36A6QL64 1941 aa0.84□□□□□ -2.27
CDC42BPA-211ENST00000466538 HMGN2P05204 90 aaKnown RBP0.84□□□□□ -2.27
CDC42BPA-211ENST00000466538 PTPN23Q9H3S7 1636 aa0.84□□□□□ -2.28
CDC42BPA-211ENST00000466538 DNAJC13O75165 2243 aa0.84□□□□□ -2.28
CDC42BPA-211ENST00000466538 GPR98Q8WXG9 6306 aa0.84□□□□□ -2.28
CDC42BPA-211ENST00000466538 KCPQ6ZWJ8 1503 aa0.84□□□□□ -2.28
CDC42BPA-211ENST00000466538 IQGAP3Q86VI3 1631 aa0.83□□□□□ -2.28
CDC42BPA-211ENST00000466538 A0A0D9SFI3 127 aa0.83□□□□□ -2.28
CDC42BPA-211ENST00000466538 A0A0D9SG42 100 aa0.83□□□□□ -2.28
CDC42BPA-211ENST00000466538 TRBV6-1A0A0K0K1D8 114 aa0.83□□□□□ -2.28
CDC42BPA-211ENST00000466538 SPATA8Q6RVD6 105 aa0.83□□□□□ -2.28
CDC42BPA-211ENST00000466538 LINC00643Q86TS7 51 aa0.83□□□□□ -2.28
CDC42BPA-211ENST00000466538 RGPD1P0DJD0 1748 aa0.83□□□□□ -2.28
CDC42BPA-211ENST00000466538 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
CDC42BPA-211ENST00000466538 RGPD8O14715 1765 aaPredicted RBP0.83□□□□□ -2.28
CDC42BPA-211ENST00000466538 RGPD5Q99666 1765 aa0.83□□□□□ -2.28
CDC42BPA-211ENST00000466538 SCN11AQ9UI33 1791 aa0.83□□□□□ -2.28
CDC42BPA-211ENST00000466538 CEP170BQ9Y4F5 1589 aaPredicted RBP0.83□□□□□ -2.28
CDC42BPA-211ENST00000466538 NCOA2Q15596 1464 aa0.82□□□□□ -2.28
CDC42BPA-211ENST00000466538 H0Y9P7 68 aa0.82□□□□□ -2.28
CDC42BPA-211ENST00000466538 SPINK7P58062 85 aa0.82□□□□□ -2.28
CDC42BPA-211ENST00000466538 C10orf113Q5VZT2 155 aa0.82□□□□□ -2.28
CDC42BPA-211ENST00000466538 SSBP3-AS1Q7Z2R9 100 aa0.82□□□□□ -2.28
CDC42BPA-211ENST00000466538 TULP4Q9NRJ4 1543 aa0.82□□□□□ -2.28
CDC42BPA-211ENST00000466538 LRRC9Q6ZRR7 1453 aa0.81□□□□□ -2.28
CDC42BPA-211ENST00000466538 ARFGEF2Q9Y6D5 1785 aa0.81□□□□□ -2.28
CDC42BPA-211ENST00000466538 COX6A2Q02221 97 aa0.81□□□□□ -2.28
CDC42BPA-211ENST00000466538 PLGLAQ15195 96 aa0.81□□□□□ -2.28
CDC42BPA-211ENST00000466538 DEFB107AQ8IZN7 70 aa0.81□□□□□ -2.28
CDC42BPA-211ENST00000466538 PKD1L3Q7Z443 1732 aa0.81□□□□□ -2.28
CDC42BPA-211ENST00000466538 MYO5CQ9NQX4 1742 aa0.81□□□□□ -2.28
CDC42BPA-211ENST00000466538 SLIT1O75093 1534 aa0.8□□□□□ -2.28
CDC42BPA-211ENST00000466538 ASXL3Q9C0F0 2248 aa0.8□□□□□ -2.28
CDC42BPA-211ENST00000466538 ADAMTS12P58397 1594 aa0.8□□□□□ -2.28
CDC42BPA-211ENST00000466538 MYMXA0A1B0GTQ4 84 aa0.8□□□□□ -2.28
CDC42BPA-211ENST00000466538 CEBPZOSA8MTT3 80 aa0.8□□□□□ -2.28
CDC42BPA-211ENST00000466538 IQCF6A8MYZ5 107 aa0.8□□□□□ -2.28
CDC42BPA-211ENST00000466538 BVES-AS1Q5T3Y7 98 aa0.8□□□□□ -2.28
CDC42BPA-211ENST00000466538 KRTAP5-10Q6L8G5 202 aa0.8□□□□□ -2.28
CDC42BPA-211ENST00000466538 UBE2D4Q9Y2X8 147 aa0.8□□□□□ -2.28
CDC42BPA-211ENST00000466538 ASH1LQ9NR48 2969 aaKnown RBP0.8□□□□□ -2.28
CDC42BPA-211ENST00000466538 ATP7BP35670 1465 aa0.8□□□□□ -2.28
CDC42BPA-211ENST00000466538 SAMD9Q5K651 1589 aa0.79□□□□□ -2.28
CDC42BPA-211ENST00000466538 A0A0G2JMZ2 1700 aa0.79□□□□□ -2.28
CDC42BPA-211ENST00000466538 A0A1B0GU69 56 aa0.79□□□□□ -2.28
CDC42BPA-211ENST00000466538 IGLC2P0DOY2 106 aa0.79□□□□□ -2.28
CDC42BPA-211ENST00000466538 IGLC3P0DOY3 106 aa0.79□□□□□ -2.28
CDC42BPA-211ENST00000466538 KRTAP19-3Q7Z4W3 81 aa0.79□□□□□ -2.28
CDC42BPA-211ENST00000466538 NAV3Q8IVL0 2385 aa0.79□□□□□ -2.28
CDC42BPA-211ENST00000466538 ZC3H13Q5T200 1668 aaKnown RBP0.78□□□□□ -2.28
CDC42BPA-211ENST00000466538 COL6A3P12111 3177 aa0.78□□□□□ -2.28
CDC42BPA-211ENST00000466538 JMJD1CQ15652 2540 aa0.78□□□□□ -2.28
CDC42BPA-211ENST00000466538 A0A1B0GUT8 65 aa0.78□□□□□ -2.28
CDC42BPA-211ENST00000466538 H3BUT2 72 aa0.78□□□□□ -2.28
CDC42BPA-211ENST00000466538 PIGYQ3MUY2 71 aa0.78□□□□□ -2.28
CDC42BPA-211ENST00000466538 C6orf201Q7Z4U5 140 aa0.78□□□□□ -2.28
CDC42BPA-211ENST00000466538 ERCC6L2Q5T890 1561 aa0.78□□□□□ -2.29
CDC42BPA-211ENST00000466538 ITSN1Q15811 1721 aa0.78□□□□□ -2.29
CDC42BPA-211ENST00000466538 TRBV7-4A0A0J9YYF1 115 aa0.77□□□□□ -2.29
CDC42BPA-211ENST00000466538 FAM103A1Q9BTL3 118 aaKnown RBP0.77□□□□□ -2.29
CDC42BPA-211ENST00000466538 ABCC1P33527 1531 aa0.77□□□□□ -2.29
CDC42BPA-211ENST00000466538 USP32Q8NFA0 1604 aa0.77□□□□□ -2.29
CDC42BPA-211ENST00000466538 POLR1AO95602 1720 aaPredicted RBP0.76□□□□□ -2.29
CDC42BPA-211ENST00000466538 QSER1Q2KHR3 1735 aa0.76□□□□□ -2.29
CDC42BPA-211ENST00000466538 PIK3C2BO00750 1634 aa0.76□□□□□ -2.29
CDC42BPA-211ENST00000466538 PAPPAQ13219 1627 aa0.76□□□□□ -2.29
CDC42BPA-211ENST00000466538 CD163L1Q9NR16 1453 aa0.76□□□□□ -2.29
CDC42BPA-211ENST00000466538 A0A087WXM4 84 aa0.76□□□□□ -2.29
CDC42BPA-211ENST00000466538 SMIM13P0DJ93 91 aa0.76□□□□□ -2.29
CDC42BPA-211ENST00000466538 DEFB121Q5J5C9 76 aa0.76□□□□□ -2.29
CDC42BPA-211ENST00000466538 TP53AIP1Q9HCN2 124 aa0.76□□□□□ -2.29
CDC42BPA-211ENST00000466538 SMCO4Q9NRQ5 59 aa0.76□□□□□ -2.29
CDC42BPA-211ENST00000466538 UGGT2Q9NYU1 1516 aa0.75□□□□□ -2.29
CDC42BPA-211ENST00000466538 CCDC141Q6ZP82 1450 aa0.75□□□□□ -2.29
CDC42BPA-211ENST00000466538 ANKARQ7Z5J8 1434 aa0.75□□□□□ -2.29
CDC42BPA-211ENST00000466538 AHCTF1Q8WYP5 2266 aa0.75□□□□□ -2.29
CDC42BPA-211ENST00000466538 LINC00959A0A1B0GUT2 108 aa0.75□□□□□ -2.29
CDC42BPA-211ENST00000466538 I3L2K1 104 aa0.75□□□□□ -2.29
CDC42BPA-211ENST00000466538 PDCD5O14737 125 aa0.75□□□□□ -2.29
CDC42BPA-211ENST00000466538 NDUFB1O75438 58 aa0.75□□□□□ -2.29
CDC42BPA-211ENST00000466538 CFDP00746 253 aaPredicted RBP0.75□□□□□ -2.29
CDC42BPA-211ENST00000466538 DEFB112Q30KQ8 113 aa0.75□□□□□ -2.29
CDC42BPA-211ENST00000466538 CNFNQ9BYD5 112 aa0.75□□□□□ -2.29
CDC42BPA-211ENST00000466538 PARP4Q9UKK3 1724 aaKnown RBP0.75□□□□□ -2.29
CDC42BPA-211ENST00000466538 KIAA0556O60303 1618 aa0.75□□□□□ -2.29
CDC42BPA-211ENST00000466538 FXYD6-FXYD2A0A087WZ82 144 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms