RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 CKS1BP61024 79 aa4.76□□□□□ -1.65
CDHR3-204ENST00000466351 NOTCH2Q04721 2471 aa4.76□□□□□ -1.65
CDHR3-204ENST00000466351 GAGE2BQ13066 116 aa4.76□□□□□ -1.65
CDHR3-204ENST00000466351 GAGE6Q13070 117 aa4.76□□□□□ -1.65
CDHR3-204ENST00000466351 GAGE2EQ4V326 116 aa4.76□□□□□ -1.65
CDHR3-204ENST00000466351 WFDC9Q8NEX5 89 aa4.76□□□□□ -1.65
CDHR3-204ENST00000466351 CLEC2BQ92478 149 aa4.76□□□□□ -1.65
CDHR3-204ENST00000466351 GAGE2DQ9UEU5 116 aa4.76□□□□□ -1.65
CDHR3-204ENST00000466351 AKAP9Q99996 3911 aa4.76□□□□□ -1.65
CDHR3-204ENST00000466351 IGKV2-28A0A075B6P5 120 aa4.75□□□□□ -1.65
CDHR3-204ENST00000466351 PAX4O43316 350 aa4.75□□□□□ -1.65
CDHR3-204ENST00000466351 DNAL4O96015 105 aa4.75□□□□□ -1.65
CDHR3-204ENST00000466351 IGKV2D-28P01615 120 aa4.75□□□□□ -1.65
CDHR3-204ENST00000466351 CCL18P55774 89 aa4.75□□□□□ -1.65
CDHR3-204ENST00000466351 LINC00158P58513 81 aa4.74□□□□□ -1.65
CDHR3-204ENST00000466351 KRTAP10-3P60369 221 aa4.74□□□□□ -1.65
CDHR3-204ENST00000466351 NPC2P61916 151 aa4.74□□□□□ -1.65
CDHR3-204ENST00000466351 C6orf226Q5I0X4 101 aa4.74□□□□□ -1.65
CDHR3-204ENST00000466351 LELP1Q5T871 98 aa4.74□□□□□ -1.65
CDHR3-204ENST00000466351 LINC00337Q8N6G1 96 aa4.74□□□□□ -1.65
CDHR3-204ENST00000466351 C15orf53Q8NAA6 179 aa4.74□□□□□ -1.65
CDHR3-204ENST00000466351 Q8NAQ8 132 aa4.74□□□□□ -1.65
CDHR3-204ENST00000466351 OBSCN-AS1Q96MR7 158 aa4.74□□□□□ -1.65
CDHR3-204ENST00000466351 GVQW2A0A096LPI5 108 aaPredicted RBP4.73□□□□□ -1.65
CDHR3-204ENST00000466351 F8WDY8 70 aa4.73□□□□□ -1.65
CDHR3-204ENST00000466351 SPART-AS1P0CW21 52 aa4.73□□□□□ -1.65
CDHR3-204ENST00000466351 DEFB130BP0DP73 79 aa4.73□□□□□ -1.65
CDHR3-204ENST00000466351 DEFB130AP0DP74 79 aa4.73□□□□□ -1.65
CDHR3-204ENST00000466351 DAD1P61803 113 aa4.73□□□□□ -1.65
CDHR3-204ENST00000466351 LINC00643Q86TS7 51 aa4.73□□□□□ -1.65
CDHR3-204ENST00000466351 LINC00167Q96N53 147 aa4.73□□□□□ -1.65
CDHR3-204ENST00000466351 PRR34Q9NV39 138 aa4.73□□□□□ -1.65
CDHR3-204ENST00000466351 TOMM7Q9P0U1 55 aa4.73□□□□□ -1.65
CDHR3-204ENST00000466351 KLK5Q9Y337 293 aaPredicted RBP4.73□□□□□ -1.65
CDHR3-204ENST00000466351 FASNP49327 2511 aaKnown RBP4.72□□□□□ -1.65
CDHR3-204ENST00000466351 A0A0J9YWU9 116 aa4.72□□□□□ -1.65
CDHR3-204ENST00000466351 FAM229AH3BQW9 127 aa4.72□□□□□ -1.65
CDHR3-204ENST00000466351 BAALC-AS2P0C853 105 aa4.72□□□□□ -1.65
CDHR3-204ENST00000466351 IGHV4-30-4P0DP06 118 aa4.72□□□□□ -1.65
CDHR3-204ENST00000466351 MALP21145 153 aa4.72□□□□□ -1.65
CDHR3-204ENST00000466351 KIAA0087Q14695 138 aa4.72□□□□□ -1.65
CDHR3-204ENST00000466351 CFAP161Q6P656 301 aa4.72□□□□□ -1.65
CDHR3-204ENST00000466351 SMIM11BQ8TCY0 68 aa4.72□□□□□ -1.65
CDHR3-204ENST00000466351 TMEM126AQ9H061 195 aa4.72□□□□□ -1.65
CDHR3-204ENST00000466351 FN1P02751 2386 aaKnown RBP4.72□□□□□ -1.65
CDHR3-204ENST00000466351 ZNF469Q96JG9 3925 aaPredicted RBP4.71□□□□□ -1.65
CDHR3-204ENST00000466351 NDUFV3P56181 108 aaKnown RBP4.71□□□□□ -1.66
CDHR3-204ENST00000466351 REG3AQ06141 175 aa4.71□□□□□ -1.66
CDHR3-204ENST00000466351 ANAPC13Q9BS18 74 aa4.71□□□□□ -1.66
CDHR3-204ENST00000466351 GCN1Q92616 2671 aaKnown RBP4.71□□□□□ -1.66
CDHR3-204ENST00000466351 NIPBLQ6KC79 2804 aaeCLIP4.71□□□□□ -1.66
CDHR3-204ENST00000466351 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
CDHR3-204ENST00000466351 JMJD7-PLA2G4BH0Y9G9 81 aa4.7□□□□□ -1.66
CDHR3-204ENST00000466351 GHRHP01286 108 aa4.7□□□□□ -1.66
CDHR3-204ENST00000466351 XCL1P47992 114 aa4.7□□□□□ -1.66
CDHR3-204ENST00000466351 DEFB135Q30KP9 77 aa4.7□□□□□ -1.66
CDHR3-204ENST00000466351 TTC32Q5I0X7 151 aa4.7□□□□□ -1.66
CDHR3-204ENST00000466351 ATP5EP2Q5VTU8 51 aa4.7□□□□□ -1.66
CDHR3-204ENST00000466351 C5orf38Q86SI9 138 aa4.7□□□□□ -1.66
CDHR3-204ENST00000466351 CHCHD10Q8WYQ3 142 aaPredicted RBP4.7□□□□□ -1.66
CDHR3-204ENST00000466351 FAM218AQ96MZ4 157 aa4.7□□□□□ -1.66
CDHR3-204ENST00000466351 KRTAP4-6Q9BYQ5 205 aa4.7□□□□□ -1.66
CDHR3-204ENST00000466351 C11orf68Q9H3H3 251 aaKnown RBP4.7□□□□□ -1.66
CDHR3-204ENST00000466351 ORMDL1Q9P0S3 153 aa4.7□□□□□ -1.66
CDHR3-204ENST00000466351 A0A0U1RRA0 63 aa4.69□□□□□ -1.66
CDHR3-204ENST00000466351 ANGP03950 147 aaKnown RBP4.69□□□□□ -1.66
CDHR3-204ENST00000466351 S100A7L2Q5SY68 101 aa4.69□□□□□ -1.66
CDHR3-204ENST00000466351 C22orf24Q9Y442 160 aa4.69□□□□□ -1.66
CDHR3-204ENST00000466351 IGKV3OR2-268A0A0C4DH90 116 aa4.68□□□□□ -1.66
CDHR3-204ENST00000466351 TRBV7-6A0A0J9YX20 115 aa4.68□□□□□ -1.66
CDHR3-204ENST00000466351 TMEM256-PLSCR3K7ERE1 68 aa4.68□□□□□ -1.66
CDHR3-204ENST00000466351 PFN2P35080 140 aa4.68□□□□□ -1.66
CDHR3-204ENST00000466351 LINC00269Q8N2A0 174 aa4.68□□□□□ -1.66
CDHR3-204ENST00000466351 OTOGQ6ZRI0 2925 aa4.67□□□□□ -1.66
CDHR3-204ENST00000466351 TEP1Q99973 2627 aaKnown RBP4.67□□□□□ -1.66
CDHR3-204ENST00000466351 A0A096LPF7 62 aa4.67□□□□□ -1.66
CDHR3-204ENST00000466351 INAFM1C9JVW0 142 aa4.67□□□□□ -1.66
CDHR3-204ENST00000466351 PDE6GP18545 87 aa4.67□□□□□ -1.66
CDHR3-204ENST00000466351 EGFEM1PQ0D2K5 195 aa4.67□□□□□ -1.66
CDHR3-204ENST00000466351 ANK3Q12955 4377 aaKnown RBP4.66□□□□□ -1.66
CDHR3-204ENST00000466351 A0A087WYN8 130 aa4.66□□□□□ -1.66
CDHR3-204ENST00000466351 LECT2O14960 151 aa4.66□□□□□ -1.66
CDHR3-204ENST00000466351 NHLRC4P0CG21 123 aaPredicted RBP4.66□□□□□ -1.66
CDHR3-204ENST00000466351 SPAG11BQ08648 103 aa4.66□□□□□ -1.66
CDHR3-204ENST00000466351 Q6JHZ5 121 aa4.66□□□□□ -1.66
CDHR3-204ENST00000466351 Q8N814 137 aa4.66□□□□□ -1.66
CDHR3-204ENST00000466351 OR13C6PQ8NH95 151 aa4.66□□□□□ -1.66
CDHR3-204ENST00000466351 SMR3AQ99954 134 aa4.66□□□□□ -1.66
CDHR3-204ENST00000466351 VWFP04275 2813 aa4.65□□□□□ -1.66
CDHR3-204ENST00000466351 IGLV6-57P01721 117 aa4.65□□□□□ -1.67
CDHR3-204ENST00000466351 NANOS2P60321 138 aaKnown RBP4.65□□□□□ -1.67
CDHR3-204ENST00000466351 HIST1H4AP62805 103 aaKnown RBP4.65□□□□□ -1.67
CDHR3-204ENST00000466351 C2orf48Q96LS8 159 aa4.65□□□□□ -1.67
CDHR3-204ENST00000466351 CELA1Q9UNI1 258 aa4.65□□□□□ -1.67
CDHR3-204ENST00000466351 TRBV10-3A0A0K0K1G6 114 aa4.64□□□□□ -1.67
CDHR3-204ENST00000466351 CCKP06307 115 aa4.64□□□□□ -1.67
CDHR3-204ENST00000466351 ATRQ13535 2644 aa4.63□□□□□ -1.67
CDHR3-204ENST00000466351 LOC110117498A0A087WWA1 95 aa4.63□□□□□ -1.67
CDHR3-204ENST00000466351 ZNF561-AS1K7EIQ3 104 aa4.63□□□□□ -1.67
CDHR3-204ENST00000466351 ATOX1O00244 68 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms