RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 MAP1LC3AQ9H492 121 aa3.04□□□□□ -1.92
EXOSC3-204ENST00000465860 TNXBP22105 4242 aa3.04□□□□□ -1.92
EXOSC3-204ENST00000465860 TGIF2-C20orf24A0A0A6YYL0 155 aa3.03□□□□□ -1.92
EXOSC3-204ENST00000465860 LOC389332A0A1B0GUA5 103 aa3.03□□□□□ -1.92
EXOSC3-204ENST00000465860 SMIM1B2RUZ4 78 aa3.03□□□□□ -1.92
EXOSC3-204ENST00000465860 K7EMI3 77 aa3.03□□□□□ -1.92
EXOSC3-204ENST00000465860 INAFM2P0DMQ5 153 aa3.03□□□□□ -1.92
EXOSC3-204ENST00000465860 RAB5AP20339 215 aa3.03□□□□□ -1.92
EXOSC3-204ENST00000465860 G0S2P27469 103 aa3.03□□□□□ -1.92
EXOSC3-204ENST00000465860 RPL24P83731 157 aaKnown RBP3.03□□□□□ -1.92
EXOSC3-204ENST00000465860 FABP9Q0Z7S8 132 aa3.03□□□□□ -1.92
EXOSC3-204ENST00000465860 CIRBPQ14011 172 aaKnown RBP3.03□□□□□ -1.92
EXOSC3-204ENST00000465860 TMEM101Q96IK0 257 aa3.03□□□□□ -1.92
EXOSC3-204ENST00000465860 NXT2Q9NPJ8 142 aaKnown RBP3.03□□□□□ -1.92
EXOSC3-204ENST00000465860 TRAPPC1Q9Y5R8 145 aa3.03□□□□□ -1.92
EXOSC3-204ENST00000465860 IGLV4-3A0A075B6K6 122 aa3.02□□□□□ -1.93
EXOSC3-204ENST00000465860 IGLV5-45A0A087WSX0 123 aa3.02□□□□□ -1.93
EXOSC3-204ENST00000465860 GVQW2A0A096LPI5 108 aaPredicted RBP3.02□□□□□ -1.93
EXOSC3-204ENST00000465860 TRAV13-1A0A0B4J241 112 aa3.02□□□□□ -1.93
EXOSC3-204ENST00000465860 LINC01549A6NIU2 74 aa3.02□□□□□ -1.93
EXOSC3-204ENST00000465860 IFI27P40305 119 aaPredicted RBP3.02□□□□□ -1.93
EXOSC3-204ENST00000465860 COX6A2Q02221 97 aa3.02□□□□□ -1.93
EXOSC3-204ENST00000465860 CD164L2Q6UWJ8 174 aa3.02□□□□□ -1.93
EXOSC3-204ENST00000465860 LINC00173Q6ZV60 143 aa3.02□□□□□ -1.93
EXOSC3-204ENST00000465860 C5orf38Q86SI9 138 aa3.02□□□□□ -1.93
EXOSC3-204ENST00000465860 STPG4Q8N801 248 aa3.02□□□□□ -1.93
EXOSC3-204ENST00000465860 TIMM21Q9BVV7 248 aa3.02□□□□□ -1.93
EXOSC3-204ENST00000465860 CSDC2Q9Y534 153 aaKnown RBP3.02□□□□□ -1.93
EXOSC3-204ENST00000465860 IGLV4-69A0A075B6H9 119 aa3.01□□□□□ -1.93
EXOSC3-204ENST00000465860 A0A096LNI7 61 aa3.01□□□□□ -1.93
EXOSC3-204ENST00000465860 IGHV3OR16-9A0A0B4J2B5 98 aa3.01□□□□□ -1.93
EXOSC3-204ENST00000465860 A0A0J9YXV3 536 aa3.01□□□□□ -1.93
EXOSC3-204ENST00000465860 A4D1N5 150 aa3.01□□□□□ -1.93
EXOSC3-204ENST00000465860 C5orf52A6NGY3 159 aa3.01□□□□□ -1.93
EXOSC3-204ENST00000465860 RAB5BP61020 215 aa3.01□□□□□ -1.93
EXOSC3-204ENST00000465860 SS18Q15532 418 aa3.01□□□□□ -1.93
EXOSC3-204ENST00000465860 ORMDL2Q53FV1 153 aa3.01□□□□□ -1.93
EXOSC3-204ENST00000465860 FA2HQ7L5A8 372 aa3.01□□□□□ -1.93
EXOSC3-204ENST00000465860 Q8N8P6 123 aa3.01□□□□□ -1.93
EXOSC3-204ENST00000465860 SPACA4Q8TDM5 124 aa3.01□□□□□ -1.93
EXOSC3-204ENST00000465860 YPEL4Q96NS1 127 aa3.01□□□□□ -1.93
EXOSC3-204ENST00000465860 IGHV3-64A0A075B6Q5 118 aa3□□□□□ -1.93
EXOSC3-204ENST00000465860 IGHV1-58A0A0C4DH39 117 aa3□□□□□ -1.93
EXOSC3-204ENST00000465860 IGKV2-24A0A0C4DH68 120 aa3□□□□□ -1.93
EXOSC3-204ENST00000465860 KRTAP16-1A8MUX0 517 aa3□□□□□ -1.93
EXOSC3-204ENST00000465860 C1orf196B1AJZ1 125 aa3□□□□□ -1.93
EXOSC3-204ENST00000465860 MRPS36P82909 103 aaKnown RBP3□□□□□ -1.93
EXOSC3-204ENST00000465860 LINC00242Q5T6M2 205 aa3□□□□□ -1.93
EXOSC3-204ENST00000465860 C2orf66Q6UXQ4 117 aa3□□□□□ -1.93
EXOSC3-204ENST00000465860 Q6ZRU5 148 aa3□□□□□ -1.93
EXOSC3-204ENST00000465860 ALKBH7Q9BT30 221 aaPredicted RBP3□□□□□ -1.93
EXOSC3-204ENST00000465860 SPANXA1Q9NS26 97 aa3□□□□□ -1.93
EXOSC3-204ENST00000465860 CYSLTR1Q9Y271 337 aa3□□□□□ -1.93
EXOSC3-204ENST00000465860 A0A096LNJ9 63 aa2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 LINC01546A6NGU7 62 aa2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 IGIPA6NJ69 53 aa2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 COX7A2LO14548 114 aa2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 SCO1O75880 301 aa2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 UBE2D1P51668 147 aa2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 SYCNQ0VAF6 134 aa2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 KIAA0087Q14695 138 aa2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 MAJINQ3KP22 176 aa2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 Q6ZN92 141 aa2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 BAGE3Q86Y29 109 aa2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 CARD19Q96LW7 228 aa2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 AMELXQ99217 191 aa2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 PLAC8Q9NZF1 115 aa2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 PYGO1Q9Y3Y4 419 aa2.99□□□□□ -1.93
EXOSC3-204ENST00000465860 A0A1W2PNN7 141 aa2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 COLCA2A8K830 154 aa2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 HSBP1O75506 76 aa2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 HBDP02042 147 aa2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 TRGC2P03986 189 aa2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 RPL37AP61513 92 aaKnown RBP2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 SPAG11BQ08648 103 aa2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 C9orf116Q5BN46 136 aaPredicted RBP2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 C2orf82Q6UX34 121 aa2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 UNQ6190/PRO20217Q6UXQ8 127 aa2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 C18orf32Q8TCD1 76 aa2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 ORAOV1Q8WV07 137 aa2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 TOMM6Q96B49 74 aa2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 CHCHD1Q96BP2 118 aaKnown RBP2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 TMEM141Q96I45 108 aa2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 C2orf88Q9BSF0 95 aa2.98□□□□□ -1.93
EXOSC3-204ENST00000465860 HMCN2Q8NDA2 5059 aa2.97□□□□□ -1.93
EXOSC3-204ENST00000465860 A0A087WZ39 114 aa2.97□□□□□ -1.93
EXOSC3-204ENST00000465860 A0A087X002 238 aa2.97□□□□□ -1.93
EXOSC3-204ENST00000465860 FAM168BA1KXE4 195 aa2.97□□□□□ -1.93
EXOSC3-204ENST00000465860 ATP5LO75964 103 aa2.97□□□□□ -1.93
EXOSC3-204ENST00000465860 LINC00614P0C842 121 aa2.97□□□□□ -1.93
EXOSC3-204ENST00000465860 PMCHL1Q16048 86 aa2.97□□□□□ -1.93
EXOSC3-204ENST00000465860 FAM19A3Q7Z5A8 133 aa2.97□□□□□ -1.93
EXOSC3-204ENST00000465860 KRTAP11-1Q8IUC1 163 aa2.97□□□□□ -1.93
EXOSC3-204ENST00000465860 DPH3Q96FX2 82 aa2.97□□□□□ -1.93
EXOSC3-204ENST00000465860 CAMK2N2Q96S95 79 aa2.97□□□□□ -1.93
EXOSC3-204ENST00000465860 C6orf48Q9UBA6 75 aa2.97□□□□□ -1.93
EXOSC3-204ENST00000465860 CDKN2A-AS1Q9UH64 79 aa2.97□□□□□ -1.93
EXOSC3-204ENST00000465860 APOMO95445 188 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms