RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 C6orf223Q8N319 242 aa14.35□□□□□ -0.11
ITGA4-204ENST00000465522 HIGD1BQ9P298 99 aa14.35□□□□□ -0.11
ITGA4-204ENST00000465522 ALMS1Q8TCU4 4167 aa14.34□□□□□ -0.11
ITGA4-204ENST00000465522 USP17L23D6RBM5 183 aa14.33□□□□□ -0.12
ITGA4-204ENST00000465522 GVQW2A0A096LPI5 108 aaPredicted RBP14.32□□□□□ -0.12
ITGA4-204ENST00000465522 CTAG1AP78358 180 aa14.32□□□□□ -0.12
ITGA4-204ENST00000465522 NTN5Q8WTR8 489 aaPredicted RBP14.32□□□□□ -0.12
ITGA4-204ENST00000465522 LECT2O14960 151 aa14.31□□□□□ -0.12
ITGA4-204ENST00000465522 MEIG1Q5JSS6 88 aa14.3□□□□□ -0.12
ITGA4-204ENST00000465522 Q6ZRN7 208 aaPredicted RBP14.3□□□□□ -0.12
ITGA4-204ENST00000465522 DNAH10Q8IVF4 4471 aa14.29□□□□□ -0.12
ITGA4-204ENST00000465522 CIRBPQ14011 172 aaKnown RBP14.29□□□□□ -0.12
ITGA4-204ENST00000465522 UNQ6190/PRO20217Q6UXQ8 127 aa14.29□□□□□ -0.12
ITGA4-204ENST00000465522 C2orf48Q96LS8 159 aa14.29□□□□□ -0.12
ITGA4-204ENST00000465522 CAMK2N2Q96S95 79 aa14.29□□□□□ -0.12
ITGA4-204ENST00000465522 TMEM238C9JI98 176 aa14.27□□□□□ -0.12
ITGA4-204ENST00000465522 SRSF9Q13242 221 aaKnown RBP eCLIP14.27□□□□□ -0.12
ITGA4-204ENST00000465522 C1orf134Q5TEV5 83 aa14.27□□□□□ -0.12
ITGA4-204ENST00000465522 DNAH6Q9C0G6 4158 aa14.27□□□□□ -0.13
ITGA4-204ENST00000465522 A0A0U1RRA0 63 aa14.27□□□□□ -0.13
ITGA4-204ENST00000465522 LINC00587B1AMM8 73 aa14.27□□□□□ -0.13
ITGA4-204ENST00000465522 C10orf25Q5T742 122 aa14.27□□□□□ -0.13
ITGA4-204ENST00000465522 HIST1H4GQ99525 98 aa14.27□□□□□ -0.13
ITGA4-204ENST00000465522 TIMM17BO60830 172 aa14.26□□□□□ -0.13
ITGA4-204ENST00000465522 WFDC2Q14508 124 aa14.26□□□□□ -0.13
ITGA4-204ENST00000465522 F8WDY8 70 aa14.25□□□□□ -0.13
ITGA4-204ENST00000465522 SMIM13P0DJ93 91 aa14.25□□□□□ -0.13
ITGA4-204ENST00000465522 ADAMTSL4-AS1Q5T5F5 129 aa14.25□□□□□ -0.13
ITGA4-204ENST00000465522 LITAFQ99732 161 aa14.25□□□□□ -0.13
ITGA4-204ENST00000465522 SPANXB1Q9NS25 103 aaPredicted RBP14.25□□□□□ -0.13
ITGA4-204ENST00000465522 ERG28Q9UKR5 140 aa14.25□□□□□ -0.13
ITGA4-204ENST00000465522 PFN2P35080 140 aa14.24□□□□□ -0.13
ITGA4-204ENST00000465522 LINC00158P58513 81 aa14.24□□□□□ -0.13
ITGA4-204ENST00000465522 HSD52Q0P140 79 aa14.24□□□□□ -0.13
ITGA4-204ENST00000465522 SYCNQ0VAF6 134 aa14.23□□□□□ -0.13
ITGA4-204ENST00000465522 C14orf177Q52M58 125 aa14.23□□□□□ -0.13
ITGA4-204ENST00000465522 C9orf116Q5BN46 136 aaPredicted RBP14.23□□□□□ -0.13
ITGA4-204ENST00000465522 Q6ZRU5 148 aa14.23□□□□□ -0.13
ITGA4-204ENST00000465522 LRCOL1A6NCL2 159 aa14.22□□□□□ -0.13
ITGA4-204ENST00000465522 TAL2Q16559 108 aa14.22□□□□□ -0.13
ITGA4-204ENST00000465522 TRBV30A0A0K0K1B3 111 aa14.21□□□□□ -0.13
ITGA4-204ENST00000465522 DAND5Q8N907 189 aa14.21□□□□□ -0.13
ITGA4-204ENST00000465522 C6orf48Q9UBA6 75 aa14.21□□□□□ -0.13
ITGA4-204ENST00000465522 COX17Q14061 63 aa14.21□□□□□ -0.14
ITGA4-204ENST00000465522 SPANXDQ9BXN6 97 aa14.21□□□□□ -0.14
ITGA4-204ENST00000465522 SPANXCQ9NY87 97 aa14.21□□□□□ -0.14
ITGA4-204ENST00000465522 HINT1P49773 126 aaPredicted RBP14.2□□□□□ -0.14
ITGA4-204ENST00000465522 Q6ZVH6 145 aa14.2□□□□□ -0.14
ITGA4-204ENST00000465522 LCE6AA0A183 80 aa14.19□□□□□ -0.14
ITGA4-204ENST00000465522 SLPIP03973 132 aa14.19□□□□□ -0.14
ITGA4-204ENST00000465522 GCSHP23434 173 aa14.18□□□□□ -0.14
ITGA4-204ENST00000465522 CEND1Q8N111 149 aa14.18□□□□□ -0.14
ITGA4-204ENST00000465522 DNAH2Q9P225 4427 aa14.18□□□□□ -0.14
ITGA4-204ENST00000465522 MIR7-3HGQ8N6C7 128 aa14.18□□□□□ -0.14
ITGA4-204ENST00000465522 CARD19Q96LW7 228 aa14.18□□□□□ -0.14
ITGA4-204ENST00000465522 NPC2P61916 151 aa14.17□□□□□ -0.14
ITGA4-204ENST00000465522 MUSTN1Q8IVN3 82 aa14.17□□□□□ -0.14
ITGA4-204ENST00000465522 M0R143 59 aa14.16□□□□□ -0.14
ITGA4-204ENST00000465522 BVES-AS1Q5T3Y7 98 aa14.15□□□□□ -0.14
ITGA4-204ENST00000465522 A0A087WTM6 91 aa14.15□□□□□ -0.14
ITGA4-204ENST00000465522 IFITM1P13164 125 aa14.15□□□□□ -0.14
ITGA4-204ENST00000465522 BATFQ16520 125 aa14.15□□□□□ -0.14
ITGA4-204ENST00000465522 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.14□□□□□ -0.15
ITGA4-204ENST00000465522 PTTG1IPP53801 180 aa14.14□□□□□ -0.15
ITGA4-204ENST00000465522 RNF151Q2KHN1 245 aa14.14□□□□□ -0.15
ITGA4-204ENST00000465522 LINC00308Q8TCZ7 52 aa14.14□□□□□ -0.15
ITGA4-204ENST00000465522 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.13□□□□□ -0.15
ITGA4-204ENST00000465522 COPS9Q8WXC6 57 aa14.13□□□□□ -0.15
ITGA4-204ENST00000465522 FXYD2P54710 66 aa14.12□□□□□ -0.15
ITGA4-204ENST00000465522 CNBPP62633 177 aaKnown RBP14.12□□□□□ -0.15
ITGA4-204ENST00000465522 Q8N814 137 aa14.12□□□□□ -0.15
ITGA4-204ENST00000465522 SNHG12Q9BXW3 62 aa14.12□□□□□ -0.15
ITGA4-204ENST00000465522 RPL24P83731 157 aaKnown RBP14.11□□□□□ -0.15
ITGA4-204ENST00000465522 HYDINQ4G0P3 5121 aa14.11□□□□□ -0.15
ITGA4-204ENST00000465522 EIF4EBP3O60516 100 aaPredicted RBP14.1□□□□□ -0.15
ITGA4-204ENST00000465522 NDUFC2-KCTD14E9PQ53 114 aa14.1□□□□□ -0.15
ITGA4-204ENST00000465522 RTL8CO15255 209 aa14.1□□□□□ -0.15
ITGA4-204ENST00000465522 SOSTDC1Q6X4U4 206 aa14.09□□□□□ -0.15
ITGA4-204ENST00000465522 SACSQ9NZJ4 4579 aa14.09□□□□□ -0.15
ITGA4-204ENST00000465522 TMEM238LA0A1B0GVL6 79 aa14.08□□□□□ -0.16
ITGA4-204ENST00000465522 A6NJY4 79 aa14.08□□□□□ -0.16
ITGA4-204ENST00000465522 SND1-IT1Q9HBX3 110 aa14.08□□□□□ -0.16
ITGA4-204ENST00000465522 A4D1N5 150 aa14.07□□□□□ -0.16
ITGA4-204ENST00000465522 EREGO14944 169 aa14.07□□□□□ -0.16
ITGA4-204ENST00000465522 TNP2Q05952 138 aa14.07□□□□□ -0.16
ITGA4-204ENST00000465522 TLX1NBP0CAT3 122 aa14.06□□□□□ -0.16
ITGA4-204ENST00000465522 Q6ZRP5 223 aa14.06□□□□□ -0.16
ITGA4-204ENST00000465522 GAGE2EQ4V326 116 aa14.05□□□□□ -0.16
ITGA4-204ENST00000465522 PPDPFQ9H3Y8 114 aa14.05□□□□□ -0.16
ITGA4-204ENST00000465522 GAGE2DQ9UEU5 116 aa14.05□□□□□ -0.16
ITGA4-204ENST00000465522 FRAS1Q86XX4 4008 aa14.05□□□□□ -0.16
ITGA4-204ENST00000465522 RPL18AQ02543 176 aaKnown RBP14.04□□□□□ -0.16
ITGA4-204ENST00000465522 NHP2Q9NX24 153 aaKnown RBP14.04□□□□□ -0.16
ITGA4-204ENST00000465522 LOC107984156A0A0G2JMH3 177 aa14.04□□□□□ -0.16
ITGA4-204ENST00000465522 A6NDN8 102 aa14.04□□□□□ -0.16
ITGA4-204ENST00000465522 ARL17AQ8IVW1 177 aa14.04□□□□□ -0.16
ITGA4-204ENST00000465522 XAGE1AQ9HD64 81 aa14.04□□□□□ -0.16
ITGA4-204ENST00000465522 LOC107984640A0A0U1RRK4 108 aa14.03□□□□□ -0.16
ITGA4-204ENST00000465522 DNAH17Q9UFH2 4485 aa14.03□□□□□ -0.16
ITGA4-204ENST00000465522 C9orf163Q8N9P6 203 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms