RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 SCO1O75880 301 aa13.38□□□□□ -0.27
EDEM1-205ENST00000465187 GEMIN7Q9H840 131 aaKnown RBP13.38□□□□□ -0.27
EDEM1-205ENST00000465187 BAGE3Q86Y29 109 aa13.37□□□□□ -0.27
EDEM1-205ENST00000465187 LINC00474Q9P2X8 69 aa13.37□□□□□ -0.27
EDEM1-205ENST00000465187 TINCRA0A1B0GVN0 87 aa13.36□□□□□ -0.27
EDEM1-205ENST00000465187 SRSF9Q13242 221 aaKnown RBP eCLIP13.36□□□□□ -0.27
EDEM1-205ENST00000465187 PKIGQ9Y2B9 76 aa13.36□□□□□ -0.27
EDEM1-205ENST00000465187 RNF213Q63HN8 5207 aa13.36□□□□□ -0.27
EDEM1-205ENST00000465187 ATP5LO75964 103 aa13.35□□□□□ -0.27
EDEM1-205ENST00000465187 KIAA0087Q14695 138 aa13.35□□□□□ -0.27
EDEM1-205ENST00000465187 CDKN2A-AS1Q9UH64 79 aa13.35□□□□□ -0.27
EDEM1-205ENST00000465187 LOC107984640A0A0U1RRK4 108 aa13.34□□□□□ -0.27
EDEM1-205ENST00000465187 RNF151Q2KHN1 245 aa13.34□□□□□ -0.27
EDEM1-205ENST00000465187 KRTAP10-8P60410 259 aa13.33□□□□□ -0.28
EDEM1-205ENST00000465187 MRPL35Q9NZE8 188 aaKnown RBP13.33□□□□□ -0.28
EDEM1-205ENST00000465187 NDUFA1O15239 70 aa13.32□□□□□ -0.28
EDEM1-205ENST00000465187 NDUFA6P56556 154 aa13.32□□□□□ -0.28
EDEM1-205ENST00000465187 SPINK6Q6UWN8 80 aa13.32□□□□□ -0.28
EDEM1-205ENST00000465187 IGLV5-45A0A087WSX0 123 aa13.31□□□□□ -0.28
EDEM1-205ENST00000465187 HSBP1O75506 76 aa13.31□□□□□ -0.28
EDEM1-205ENST00000465187 C9orf116Q5BN46 136 aaPredicted RBP13.31□□□□□ -0.28
EDEM1-205ENST00000465187 Q6ZRP5 223 aa13.31□□□□□ -0.28
EDEM1-205ENST00000465187 LINC00469Q8N7U9 141 aa13.31□□□□□ -0.28
EDEM1-205ENST00000465187 PACRGQ96M98 296 aaPredicted RBP13.31□□□□□ -0.28
EDEM1-205ENST00000465187 RPL18AQ02543 176 aaKnown RBP13.3□□□□□ -0.28
EDEM1-205ENST00000465187 C10orf25Q5T742 122 aa13.3□□□□□ -0.28
EDEM1-205ENST00000465187 UNQ6190/PRO20217Q6UXQ8 127 aa13.3□□□□□ -0.28
EDEM1-205ENST00000465187 PHF5AQ7RTV0 110 aaKnown RBP13.29□□□□□ -0.28
EDEM1-205ENST00000465187 PRSS2P07478 247 aa13.28□□□□□ -0.28
EDEM1-205ENST00000465187 IGLC3P0DOY3 106 aa13.28□□□□□ -0.28
EDEM1-205ENST00000465187 FAM19A2Q8N3H0 131 aa13.28□□□□□ -0.28
EDEM1-205ENST00000465187 PSORS1C2Q9UIG4 136 aa13.28□□□□□ -0.28
EDEM1-205ENST00000465187 SERF1AO75920 110 aa13.27□□□□□ -0.29
EDEM1-205ENST00000465187 LINC00310P59036 64 aa13.27□□□□□ -0.29
EDEM1-205ENST00000465187 C6orf226Q5I0X4 101 aa13.27□□□□□ -0.29
EDEM1-205ENST00000465187 KRTAP11-1Q8IUC1 163 aa13.27□□□□□ -0.29
EDEM1-205ENST00000465187 Q8IZM0 81 aa13.27□□□□□ -0.29
EDEM1-205ENST00000465187 TOMM7Q9P0U1 55 aa13.27□□□□□ -0.29
EDEM1-205ENST00000465187 C6orf48Q9UBA6 75 aa13.27□□□□□ -0.29
EDEM1-205ENST00000465187 FAM168BA1KXE4 195 aa13.26□□□□□ -0.29
EDEM1-205ENST00000465187 C2orf82Q6UX34 121 aa13.26□□□□□ -0.29
EDEM1-205ENST00000465187 IFI27L1Q96BM0 104 aa13.26□□□□□ -0.29
EDEM1-205ENST00000465187 SMIM1B2RUZ4 78 aa13.25□□□□□ -0.29
EDEM1-205ENST00000465187 REG3GQ6UW15 175 aa13.25□□□□□ -0.29
EDEM1-205ENST00000465187 TRBV30A0A0K0K1B3 111 aa13.24□□□□□ -0.29
EDEM1-205ENST00000465187 H3BRM9 83 aa13.24□□□□□ -0.29
EDEM1-205ENST00000465187 CKS1BP61024 79 aa13.24□□□□□ -0.29
EDEM1-205ENST00000465187 NUPR1O60356 82 aa13.23□□□□□ -0.29
EDEM1-205ENST00000465187 TLX1NBP0CAT3 122 aa13.23□□□□□ -0.29
EDEM1-205ENST00000465187 TRAV12-1A0A0B4J245 112 aa13.22□□□□□ -0.29
EDEM1-205ENST00000465187 SPINK8P0C7L1 97 aa13.22□□□□□ -0.29
EDEM1-205ENST00000465187 S100A1P23297 94 aa13.22□□□□□ -0.29
EDEM1-205ENST00000465187 CHTOPQ9Y3Y2 248 aaKnown RBP13.22□□□□□ -0.29
EDEM1-205ENST00000465187 HIST1H2BKO60814 126 aa13.21□□□□□ -0.29
EDEM1-205ENST00000465187 HIST1H2BJP06899 126 aa13.21□□□□□ -0.29
EDEM1-205ENST00000465187 ZNF22P17026 224 aaPredicted RBP13.21□□□□□ -0.29
EDEM1-205ENST00000465187 HIST1H2BOP23527 126 aa13.21□□□□□ -0.29
EDEM1-205ENST00000465187 HIST1H2BBP33778 126 aa13.21□□□□□ -0.29
EDEM1-205ENST00000465187 HIST1H2BDP58876 126 aa13.21□□□□□ -0.29
EDEM1-205ENST00000465187 HIST1H2BCP62807 126 aa13.21□□□□□ -0.29
EDEM1-205ENST00000465187 HIST2H2BEQ16778 126 aa13.21□□□□□ -0.29
EDEM1-205ENST00000465187 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.21□□□□□ -0.29
EDEM1-205ENST00000465187 COX7B2Q8TF08 81 aa13.21□□□□□ -0.29
EDEM1-205ENST00000465187 HIST1H2BHQ93079 126 aa13.21□□□□□ -0.29
EDEM1-205ENST00000465187 HIST1H2BNQ99877 126 aa13.21□□□□□ -0.29
EDEM1-205ENST00000465187 HIST1H2BMQ99879 126 aa13.21□□□□□ -0.29
EDEM1-205ENST00000465187 C11orf86A6NJI1 115 aa13.2□□□□□ -0.3
EDEM1-205ENST00000465187 LEPROTL1O95214 131 aa13.2□□□□□ -0.3
EDEM1-205ENST00000465187 C1orf137Q5JT78 98 aa13.2□□□□□ -0.3
EDEM1-205ENST00000465187 KRTAP7-1Q8IUC3 87 aa13.2□□□□□ -0.3
EDEM1-205ENST00000465187 CXCL5P42830 114 aa13.19□□□□□ -0.3
EDEM1-205ENST00000465187 F8VRH5 84 aa13.18□□□□□ -0.3
EDEM1-205ENST00000465187 NDUFC2-KCTD14E9PQ53 114 aa13.17□□□□□ -0.3
EDEM1-205ENST00000465187 FAM19A5Q7Z5A7 132 aaPredicted RBP13.17□□□□□ -0.3
EDEM1-205ENST00000465187 HSPB8Q9UJY1 196 aa13.17□□□□□ -0.3
EDEM1-205ENST00000465187 IGLV5-39A0A0G2JS06 123 aa13.16□□□□□ -0.3
EDEM1-205ENST00000465187 ATP6V1G1O75348 118 aa13.16□□□□□ -0.3
EDEM1-205ENST00000465187 GAGE2EQ4V326 116 aa13.16□□□□□ -0.3
EDEM1-205ENST00000465187 TMEM170BQ5T4T1 132 aa13.16□□□□□ -0.3
EDEM1-205ENST00000465187 GAGE2DQ9UEU5 116 aa13.16□□□□□ -0.3
EDEM1-205ENST00000465187 LPAP08519 4548 aa13.14□□□□□ -0.31
EDEM1-205ENST00000465187 FABP4P15090 132 aa13.14□□□□□ -0.31
EDEM1-205ENST00000465187 IGLV7-43P04211 117 aa13.12□□□□□ -0.31
EDEM1-205ENST00000465187 H0Y8G0 127 aa13.11□□□□□ -0.31
EDEM1-205ENST00000465187 PRR26Q8N8Z3 221 aa13.11□□□□□ -0.31
EDEM1-205ENST00000465187 TMEM223A0PJW6 202 aa13.1□□□□□ -0.31
EDEM1-205ENST00000465187 C9orf129Q5T035 196 aaKnown RBP13.09□□□□□ -0.31
EDEM1-205ENST00000465187 COA6Q5JTJ3 125 aaKnown RBP13.08□□□□□ -0.32
EDEM1-205ENST00000465187 MAP1LC3CQ9BXW4 147 aa13.07□□□□□ -0.32
EDEM1-205ENST00000465187 M0QXV9 152 aa13.06□□□□□ -0.32
EDEM1-205ENST00000465187 H0Y9J4 135 aa13.04□□□□□ -0.32
EDEM1-205ENST00000465187 DIRC1Q969H9 104 aa13.04□□□□□ -0.32
EDEM1-205ENST00000465187 XAGE1AQ9HD64 81 aa13.04□□□□□ -0.32
EDEM1-205ENST00000465187 DPM2O94777 84 aa13.03□□□□□ -0.32
EDEM1-205ENST00000465187 KRTAP1-4P0C5Y4 121 aa13.03□□□□□ -0.32
EDEM1-205ENST00000465187 PLNP26678 52 aa13.03□□□□□ -0.32
EDEM1-205ENST00000465187 SFTA2Q6UW10 78 aa13.03□□□□□ -0.32
EDEM1-205ENST00000465187 ZNF625Q96I27 306 aaPredicted RBP13.02□□□□□ -0.33
EDEM1-205ENST00000465187 PMCHL2Q9BQD1 86 aa13.02□□□□□ -0.33
EDEM1-205ENST00000465187 UBE2BP63146 152 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms