RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 BORCS7-ASMTA0A0B4J1R7 106 aa3.23□□□□□ -1.89
NUP188-202ENST00000464729 TRAV13-1A0A0B4J241 112 aa3.23□□□□□ -1.89
NUP188-202ENST00000464729 TRBV6-5A0A0K0K1A5 114 aa3.23□□□□□ -1.89
NUP188-202ENST00000464729 RPL37AP8A6NKH3 93 aa3.23□□□□□ -1.89
NUP188-202ENST00000464729 Q1RN00 199 aa3.23□□□□□ -1.89
NUP188-202ENST00000464729 KRTAP13-2Q52LG2 175 aa3.23□□□□□ -1.89
NUP188-202ENST00000464729 LINC00242Q5T6M2 205 aa3.23□□□□□ -1.89
NUP188-202ENST00000464729 RPL7L1Q6DKI1 246 aaKnown RBP3.23□□□□□ -1.89
NUP188-202ENST00000464729 UNQ6190/PRO20217Q6UXQ8 127 aa3.23□□□□□ -1.89
NUP188-202ENST00000464729 MARVELD1Q9BSK0 173 aa3.23□□□□□ -1.89
NUP188-202ENST00000464729 SMDT1Q9H4I9 107 aa3.23□□□□□ -1.89
NUP188-202ENST00000464729 C6orf48Q9UBA6 75 aa3.23□□□□□ -1.89
NUP188-202ENST00000464729 CSDC2Q9Y534 153 aaKnown RBP3.23□□□□□ -1.89
NUP188-202ENST00000464729 RPL35P42766 123 aaKnown RBP3.22□□□□□ -1.89
NUP188-202ENST00000464729 POLR2KP53803 58 aaKnown RBP3.22□□□□□ -1.89
NUP188-202ENST00000464729 DEFA1P59665 94 aa3.22□□□□□ -1.89
NUP188-202ENST00000464729 SMAGPQ0VAQ4 97 aa3.22□□□□□ -1.89
NUP188-202ENST00000464729 FAM229BQ4G0N7 80 aa3.22□□□□□ -1.89
NUP188-202ENST00000464729 C9orf129Q5T035 196 aaKnown RBP3.22□□□□□ -1.89
NUP188-202ENST00000464729 FP248Q71RG6 208 aaPredicted RBP3.22□□□□□ -1.89
NUP188-202ENST00000464729 SMIM15Q7Z3B0 74 aa3.22□□□□□ -1.89
NUP188-202ENST00000464729 ORAOV1Q8WV07 137 aa3.22□□□□□ -1.89
NUP188-202ENST00000464729 CNFNQ9BYD5 112 aa3.22□□□□□ -1.89
NUP188-202ENST00000464729 ST20Q9HBF5 79 aa3.22□□□□□ -1.89
NUP188-202ENST00000464729 C22orf24Q9Y442 160 aa3.22□□□□□ -1.89
NUP188-202ENST00000464729 IGKV2D-26A0A0A0MRZ7 120 aa3.21□□□□□ -1.9
NUP188-202ENST00000464729 C7orf77A4D0Y5 90 aa3.21□□□□□ -1.9
NUP188-202ENST00000464729 NDUFC2-KCTD14E9PQ53 114 aa3.21□□□□□ -1.9
NUP188-202ENST00000464729 BCE1O60756 84 aa3.21□□□□□ -1.9
NUP188-202ENST00000464729 PFDN1O60925 122 aa3.21□□□□□ -1.9
NUP188-202ENST00000464729 FOXA3P55318 350 aaPredicted RBP3.21□□□□□ -1.9
NUP188-202ENST00000464729 MT1HP80294 61 aa3.21□□□□□ -1.9
NUP188-202ENST00000464729 SFT2D1Q8WV19 159 aa3.21□□□□□ -1.9
NUP188-202ENST00000464729 MBD3L1Q8WWY6 194 aa3.21□□□□□ -1.9
NUP188-202ENST00000464729 TMEM242Q9NWH2 141 aa3.21□□□□□ -1.9
NUP188-202ENST00000464729 IGHV3OR16-9A0A0B4J2B5 98 aa3.2□□□□□ -1.9
NUP188-202ENST00000464729 TRBV30A0A0K0K1B3 111 aa3.2□□□□□ -1.9
NUP188-202ENST00000464729 TRBV27A0A0K0K1C4 114 aa3.2□□□□□ -1.9
NUP188-202ENST00000464729 UPK1BO75841 260 aa3.2□□□□□ -1.9
NUP188-202ENST00000464729 CTRLP40313 264 aa3.2□□□□□ -1.9
NUP188-202ENST00000464729 KIAA0087Q14695 138 aa3.2□□□□□ -1.9
NUP188-202ENST00000464729 RNASE13Q5GAN3 156 aaKnown RBP3.2□□□□□ -1.9
NUP188-202ENST00000464729 SPAG11AQ6PDA7 123 aa3.2□□□□□ -1.9
NUP188-202ENST00000464729 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
NUP188-202ENST00000464729 SMIM12Q96EX1 92 aa3.2□□□□□ -1.9
NUP188-202ENST00000464729 PACRGQ96M98 296 aaPredicted RBP3.2□□□□□ -1.9
NUP188-202ENST00000464729 RNASE7Q9H1E1 156 aaKnown RBP3.2□□□□□ -1.9
NUP188-202ENST00000464729 BIN3Q9NQY0 253 aa3.2□□□□□ -1.9
NUP188-202ENST00000464729 UBE2D4Q9Y2X8 147 aa3.2□□□□□ -1.9
NUP188-202ENST00000464729 A0A1B0GVG6 124 aa3.19□□□□□ -1.9
NUP188-202ENST00000464729 RAB19A4D1S5 217 aa3.19□□□□□ -1.9
NUP188-202ENST00000464729 ZNF727A8MUV8 499 aa3.19□□□□□ -1.9
NUP188-202ENST00000464729 HSBP1L1C9JCN9 74 aa3.19□□□□□ -1.9
NUP188-202ENST00000464729 KRTAP19-2Q3LHN2 52 aa3.19□□□□□ -1.9
NUP188-202ENST00000464729 Q5BKY6 102 aa3.19□□□□□ -1.9
NUP188-202ENST00000464729 KCNRGQ8N5I3 272 aa3.19□□□□□ -1.9
NUP188-202ENST00000464729 PRO0461Q9UI25 63 aa3.19□□□□□ -1.9
NUP188-202ENST00000464729 A0A1B0GV50 99 aa3.18□□□□□ -1.9
NUP188-202ENST00000464729 FCER1GP30273 86 aa3.18□□□□□ -1.9
NUP188-202ENST00000464729 GNG4P50150 75 aa3.18□□□□□ -1.9
NUP188-202ENST00000464729 CCL20P78556 96 aa3.18□□□□□ -1.9
NUP188-202ENST00000464729 CENPWQ5EE01 88 aa3.18□□□□□ -1.9
NUP188-202ENST00000464729 C2orf82Q6UX34 121 aa3.18□□□□□ -1.9
NUP188-202ENST00000464729 LINC00299Q6ZSB3 139 aa3.18□□□□□ -1.9
NUP188-202ENST00000464729 S100ZQ8WXG8 99 aa3.18□□□□□ -1.9
NUP188-202ENST00000464729 TIMM21Q9BVV7 248 aa3.18□□□□□ -1.9
NUP188-202ENST00000464729 TP73-AS1Q9UF72 201 aa3.18□□□□□ -1.9
NUP188-202ENST00000464729 IFITM3Q01628 133 aa3.17□□□□□ -1.9
NUP188-202ENST00000464729 MRPL55Q7Z7F7 128 aaKnown RBP3.17□□□□□ -1.9
NUP188-202ENST00000464729 UMAD1C9J7I0 102 aa3.16□□□□□ -1.9
NUP188-202ENST00000464729 ATP5LO75964 103 aa3.16□□□□□ -1.9
NUP188-202ENST00000464729 PPP1R17O96001 155 aa3.16□□□□□ -1.9
NUP188-202ENST00000464729 RAB4AP20338 218 aa3.16□□□□□ -1.9
NUP188-202ENST00000464729 UBE2AP49459 152 aa3.16□□□□□ -1.9
NUP188-202ENST00000464729 UQCC3Q6UW78 93 aa3.16□□□□□ -1.9
NUP188-202ENST00000464729 Q6ZUT4 128 aa3.16□□□□□ -1.9
NUP188-202ENST00000464729 KRTAP13-1Q8IUC0 172 aa3.16□□□□□ -1.9
NUP188-202ENST00000464729 LINC01561Q8N1V8 128 aa3.16□□□□□ -1.9
NUP188-202ENST00000464729 LINC00469Q8N7U9 141 aa3.16□□□□□ -1.9
NUP188-202ENST00000464729 FAM213BQ8TBF2 198 aa3.16□□□□□ -1.9
NUP188-202ENST00000464729 FAM104AQ969W3 186 aa3.16□□□□□ -1.9
NUP188-202ENST00000464729 LINC00167Q96N53 147 aa3.16□□□□□ -1.9
NUP188-202ENST00000464729 KIR2DL4Q99706 377 aa3.16□□□□□ -1.9
NUP188-202ENST00000464729 XAGE1AQ9HD64 81 aa3.16□□□□□ -1.9
NUP188-202ENST00000464729 FXYD6-FXYD2A0A087WZ82 144 aa3.15□□□□□ -1.91
NUP188-202ENST00000464729 TGIF2-C20orf24A0A0A6YYL0 155 aa3.15□□□□□ -1.91
NUP188-202ENST00000464729 M0R2T5 61 aa3.15□□□□□ -1.91
NUP188-202ENST00000464729 Q6ZVH6 145 aa3.15□□□□□ -1.91
NUP188-202ENST00000464729 DAND5Q8N907 189 aa3.15□□□□□ -1.91
NUP188-202ENST00000464729 TMEM191AQ9H0A3 160 aa3.15□□□□□ -1.91
NUP188-202ENST00000464729 MED9Q9NWA0 146 aa3.15□□□□□ -1.91
NUP188-202ENST00000464729 TRBV20OR9-2A0A075B6H5 130 aa3.14□□□□□ -1.91
NUP188-202ENST00000464729 GIPP09681 153 aaPredicted RBP3.14□□□□□ -1.91
NUP188-202ENST00000464729 CKS1BP61024 79 aa3.14□□□□□ -1.91
NUP188-202ENST00000464729 RPL32P62910 135 aaKnown RBP3.14□□□□□ -1.91
NUP188-202ENST00000464729 HBBP68871 147 aa3.14□□□□□ -1.91
NUP188-202ENST00000464729 MRPS36P82909 103 aaKnown RBP3.14□□□□□ -1.91
NUP188-202ENST00000464729 C3orf22Q8N5N4 141 aa3.14□□□□□ -1.91
NUP188-202ENST00000464729 PLEKHB2Q96CS7 222 aa3.14□□□□□ -1.91
NUP188-202ENST00000464729 MANBALQ9NQG1 85 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms