RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 TRGV2A0A075B6R0 118 aa5.06□□□□□ -1.6
CLSTN1-204ENST00000464286 IGHV4-30-2A0A087WSY4 118 aa5.06□□□□□ -1.6
CLSTN1-204ENST00000464286 LOC110117498A0A087WWA1 95 aa5.06□□□□□ -1.6
CLSTN1-204ENST00000464286 IGHV3OR16-9A0A0B4J2B5 98 aa5.06□□□□□ -1.6
CLSTN1-204ENST00000464286 TRGV4A0A0C4DH28 118 aa5.06□□□□□ -1.6
CLSTN1-204ENST00000464286 NTM-AS1Q6ZSK4 140 aa5.06□□□□□ -1.6
CLSTN1-204ENST00000464286 Q8N814 137 aa5.06□□□□□ -1.6
CLSTN1-204ENST00000464286 SPTBN1Q01082 2364 aaKnown RBP5.05□□□□□ -1.6
CLSTN1-204ENST00000464286 HECTD1Q9ULT8 2610 aa5.05□□□□□ -1.6
CLSTN1-204ENST00000464286 TRBV6-8A0A0A6YYG3 113 aa5.05□□□□□ -1.6
CLSTN1-204ENST00000464286 NCR3O14931 201 aa5.05□□□□□ -1.6
CLSTN1-204ENST00000464286 CXCL6P80162 114 aa5.05□□□□□ -1.6
CLSTN1-204ENST00000464286 RBM3P98179 157 aaKnown RBP5.05□□□□□ -1.6
CLSTN1-204ENST00000464286 FHL2Q14192 279 aa5.05□□□□□ -1.6
CLSTN1-204ENST00000464286 XCL2Q9UBD3 114 aa5.05□□□□□ -1.6
CLSTN1-204ENST00000464286 A0A1B0GUV1 79 aa5.04□□□□□ -1.6
CLSTN1-204ENST00000464286 C1orf158Q8N1D5 194 aa5.04□□□□□ -1.6
CLSTN1-204ENST00000464286 COL6A6A6NMZ7 2263 aa5.04□□□□□ -1.6
CLSTN1-204ENST00000464286 SMIM26A0A096LP01 95 aa5.03□□□□□ -1.6
CLSTN1-204ENST00000464286 PFN2P35080 140 aa5.03□□□□□ -1.6
CLSTN1-204ENST00000464286 XCL1P47992 114 aa5.03□□□□□ -1.6
CLSTN1-204ENST00000464286 KLKP1Q107X0 134 aa5.03□□□□□ -1.6
CLSTN1-204ENST00000464286 KHDC1LQ5JSQ8 128 aa5.03□□□□□ -1.6
CLSTN1-204ENST00000464286 Q6ZTI0 123 aa5.03□□□□□ -1.6
CLSTN1-204ENST00000464286 Q96MF0 132 aa5.03□□□□□ -1.6
CLSTN1-204ENST00000464286 DSCR8Q96T75 97 aa5.03□□□□□ -1.6
CLSTN1-204ENST00000464286 Q9UF83 564 aa5.03□□□□□ -1.6
CLSTN1-204ENST00000464286 TLN1Q9Y490 2541 aaKnown RBP5.02□□□□□ -1.61
CLSTN1-204ENST00000464286 PTPRQQ9UMZ3 2332 aa5.02□□□□□ -1.61
CLSTN1-204ENST00000464286 TRAV23DV6A0A075B6W5 121 aa5.02□□□□□ -1.61
CLSTN1-204ENST00000464286 LINC00959A0A1B0GUT2 108 aa5.02□□□□□ -1.61
CLSTN1-204ENST00000464286 ERC2-IT1O76042 136 aa5.02□□□□□ -1.61
CLSTN1-204ENST00000464286 NOP10Q9NPE3 64 aaKnown RBP5.02□□□□□ -1.61
CLSTN1-204ENST00000464286 PRO0628Q9UI54 55 aa5.02□□□□□ -1.61
CLSTN1-204ENST00000464286 FBN3Q75N90 2809 aa5.02□□□□□ -1.61
CLSTN1-204ENST00000464286 ABCA2Q9BZC7 2435 aa5.02□□□□□ -1.61
CLSTN1-204ENST00000464286 MYO9AB2RTY4 2548 aa5.01□□□□□ -1.61
CLSTN1-204ENST00000464286 A0A087WVE0 104 aa5.01□□□□□ -1.61
CLSTN1-204ENST00000464286 IGHV4-28A0A0C4DH34 117 aa5.01□□□□□ -1.61
CLSTN1-204ENST00000464286 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
CLSTN1-204ENST00000464286 ODF3L2Q3SX64 289 aa5.01□□□□□ -1.61
CLSTN1-204ENST00000464286 C9orf66Q5T8R8 295 aa5.01□□□□□ -1.61
CLSTN1-204ENST00000464286 KRTAP5-3Q6L8H2 238 aa5.01□□□□□ -1.61
CLSTN1-204ENST00000464286 C10orf99Q6UWK7 81 aa5.01□□□□□ -1.61
CLSTN1-204ENST00000464286 ENHOQ6UWT2 76 aa5.01□□□□□ -1.61
CLSTN1-204ENST00000464286 C20orf197Q8N268 126 aa5.01□□□□□ -1.61
CLSTN1-204ENST00000464286 C6orf223Q8N319 242 aa5.01□□□□□ -1.61
CLSTN1-204ENST00000464286 SPTA1P02549 2419 aa5.01□□□□□ -1.61
CLSTN1-204ENST00000464286 C19orf84I3L1E1 186 aa5□□□□□ -1.61
CLSTN1-204ENST00000464286 CCL24O00175 119 aa5□□□□□ -1.61
CLSTN1-204ENST00000464286 CD164L2Q6UWJ8 174 aa5□□□□□ -1.61
CLSTN1-204ENST00000464286 KIR2DL5BQ8NHK3 375 aa5□□□□□ -1.61
CLSTN1-204ENST00000464286 LAMTOR3Q9UHA4 124 aa5□□□□□ -1.61
CLSTN1-204ENST00000464286 SPTAN1Q13813 2472 aaKnown RBP5□□□□□ -1.61
CLSTN1-204ENST00000464286 IGKV3OR2-268A0A0C4DH90 116 aa4.99□□□□□ -1.61
CLSTN1-204ENST00000464286 TRBV7-6A0A0J9YX20 115 aa4.99□□□□□ -1.61
CLSTN1-204ENST00000464286 EPM2AB3EWF7 344 aa4.99□□□□□ -1.61
CLSTN1-204ENST00000464286 GNLYP22749 145 aa4.99□□□□□ -1.61
CLSTN1-204ENST00000464286 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.99□□□□□ -1.61
CLSTN1-204ENST00000464286 LINC00575Q6W349 94 aa4.99□□□□□ -1.61
CLSTN1-204ENST00000464286 Q6ZQT0 140 aa4.99□□□□□ -1.61
CLSTN1-204ENST00000464286 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.98□□□□□ -1.61
CLSTN1-204ENST00000464286 DEFB136Q30KP8 78 aa4.98□□□□□ -1.61
CLSTN1-204ENST00000464286 CFAP46Q8IYW2 2715 aa4.97□□□□□ -1.61
CLSTN1-204ENST00000464286 IGLV4-60A0A075B6I1 120 aa4.97□□□□□ -1.61
CLSTN1-204ENST00000464286 A0A1B0GW54 56 aa4.97□□□□□ -1.61
CLSTN1-204ENST00000464286 PRM2P04554 102 aa4.97□□□□□ -1.61
CLSTN1-204ENST00000464286 LINC01547P58512 204 aaPredicted RBP4.97□□□□□ -1.61
CLSTN1-204ENST00000464286 C6orf99Q4VX62 202 aa4.97□□□□□ -1.61
CLSTN1-204ENST00000464286 Q5XG85 94 aa4.97□□□□□ -1.61
CLSTN1-204ENST00000464286 HRCT1Q6UXD1 115 aa4.97□□□□□ -1.61
CLSTN1-204ENST00000464286 LOC400499M0QZD8 3231 aa4.97□□□□□ -1.61
CLSTN1-204ENST00000464286 H7BZZ5 65 aa4.96□□□□□ -1.62
CLSTN1-204ENST00000464286 HAMPP81172 84 aa4.96□□□□□ -1.62
CLSTN1-204ENST00000464286 C9orf129Q5T035 196 aaKnown RBP4.96□□□□□ -1.62
CLSTN1-204ENST00000464286 Q6ZVQ6 151 aa4.96□□□□□ -1.62
CLSTN1-204ENST00000464286 FAM19A1Q7Z5A9 133 aa4.96□□□□□ -1.62
CLSTN1-204ENST00000464286 PRO0255Q9UI72 69 aa4.96□□□□□ -1.62
CLSTN1-204ENST00000464286 CELSR3Q9NYQ7 3312 aa4.96□□□□□ -1.62
CLSTN1-204ENST00000464286 RELNP78509 3460 aa4.96□□□□□ -1.62
CLSTN1-204ENST00000464286 HILS1P60008 231 aa4.95□□□□□ -1.62
CLSTN1-204ENST00000464286 NANOS2P60321 138 aaKnown RBP4.95□□□□□ -1.62
CLSTN1-204ENST00000464286 C4orf26Q17RF5 130 aa4.95□□□□□ -1.62
CLSTN1-204ENST00000464286 LINC00612Q8N6U2 182 aa4.95□□□□□ -1.62
CLSTN1-204ENST00000464286 DIRC1Q969H9 104 aa4.95□□□□□ -1.62
CLSTN1-204ENST00000464286 C11orf68Q9H3H3 251 aaKnown RBP4.95□□□□□ -1.62
CLSTN1-204ENST00000464286 TEX15Q9BXT5 2789 aa4.94□□□□□ -1.62
CLSTN1-204ENST00000464286 KALRNO60229 2985 aa4.94□□□□□ -1.62
CLSTN1-204ENST00000464286 A0A096LNT2 108 aa4.94□□□□□ -1.62
CLSTN1-204ENST00000464286 GVQW2A0A096LPI5 108 aaPredicted RBP4.94□□□□□ -1.62
CLSTN1-204ENST00000464286 A0A0J9YWU9 116 aa4.94□□□□□ -1.62
CLSTN1-204ENST00000464286 LOC100131303A0A0U1RQF7 123 aa4.94□□□□□ -1.62
CLSTN1-204ENST00000464286 PLAC8L1A1L4L8 177 aa4.94□□□□□ -1.62
CLSTN1-204ENST00000464286 LYRM9A8MSI8 78 aa4.94□□□□□ -1.62
CLSTN1-204ENST00000464286 IGHV4-30-4P0DP06 118 aa4.94□□□□□ -1.62
CLSTN1-204ENST00000464286 IGHV4-31P0DP07 118 aa4.94□□□□□ -1.62
CLSTN1-204ENST00000464286 MIFP14174 115 aa4.94□□□□□ -1.62
CLSTN1-204ENST00000464286 GYPEP15421 78 aa4.94□□□□□ -1.62
CLSTN1-204ENST00000464286 CYSTM1Q9H1C7 97 aa4.94□□□□□ -1.62
CLSTN1-204ENST00000464286 TENM4Q6N022 2769 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms