RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 IFI27L1Q96BM0 104 aa14.57□□□□□ -0.08
SSNA1-203ENST00000463511 HERVK_113P63121 156 aa14.56□□□□□ -0.08
SSNA1-203ENST00000463511 TINCRA0A1B0GVN0 87 aa14.55□□□□□ -0.08
SSNA1-203ENST00000463511 APOMO95445 188 aa14.55□□□□□ -0.08
SSNA1-203ENST00000463511 PRR3P79522 188 aaKnown RBP14.55□□□□□ -0.08
SSNA1-203ENST00000463511 ODF1Q14990 250 aa14.55□□□□□ -0.08
SSNA1-203ENST00000463511 COA6Q5JTJ3 125 aaKnown RBP14.55□□□□□ -0.08
SSNA1-203ENST00000463511 LINC00526Q96FQ7 95 aa14.55□□□□□ -0.08
SSNA1-203ENST00000463511 GEMIN7Q9H840 131 aaKnown RBP14.55□□□□□ -0.08
SSNA1-203ENST00000463511 LEPROTL1O95214 131 aa14.54□□□□□ -0.08
SSNA1-203ENST00000463511 LINC01561Q8N1V8 128 aa14.54□□□□□ -0.08
SSNA1-203ENST00000463511 LINC01600Q96MT4 127 aa14.54□□□□□ -0.08
SSNA1-203ENST00000463511 CDKN2A-AS1Q9UH64 79 aa14.54□□□□□ -0.08
SSNA1-203ENST00000463511 STPG4Q8N801 248 aa14.53□□□□□ -0.08
SSNA1-203ENST00000463511 RNF213Q63HN8 5207 aa14.53□□□□□ -0.08
SSNA1-203ENST00000463511 ZNF561-AS1K7EIQ3 104 aa14.52□□□□□ -0.09
SSNA1-203ENST00000463511 ORAOV1Q8WV07 137 aa14.52□□□□□ -0.09
SSNA1-203ENST00000463511 IGLV4-69A0A075B6H9 119 aa14.51□□□□□ -0.09
SSNA1-203ENST00000463511 IGLV5-45A0A087WSX0 123 aa14.51□□□□□ -0.09
SSNA1-203ENST00000463511 TRAV12-1A0A0B4J245 112 aa14.51□□□□□ -0.09
SSNA1-203ENST00000463511 IGLC3P0DOY3 106 aa14.51□□□□□ -0.09
SSNA1-203ENST00000463511 FABP4P15090 132 aa14.51□□□□□ -0.09
SSNA1-203ENST00000463511 OR10D4PQ8NGN7 298 aa14.51□□□□□ -0.09
SSNA1-203ENST00000463511 A0A096LNI7 61 aa14.5□□□□□ -0.09
SSNA1-203ENST00000463511 HSPB8Q9UJY1 196 aa14.5□□□□□ -0.09
SSNA1-203ENST00000463511 SPAG11BQ08648 103 aa14.49□□□□□ -0.09
SSNA1-203ENST00000463511 LINC00469Q8N7U9 141 aa14.49□□□□□ -0.09
SSNA1-203ENST00000463511 CHTOPQ9Y3Y2 248 aaKnown RBP14.49□□□□□ -0.09
SSNA1-203ENST00000463511 KIAA0087Q14695 138 aa14.48□□□□□ -0.09
SSNA1-203ENST00000463511 C2orf48Q96LS8 159 aa14.47□□□□□ -0.09
SSNA1-203ENST00000463511 C11orf86A6NJI1 115 aa14.46□□□□□ -0.09
SSNA1-203ENST00000463511 SYCNQ0VAF6 134 aa14.46□□□□□ -0.09
SSNA1-203ENST00000463511 PACRGQ96M98 296 aaPredicted RBP14.45□□□□□ -0.1
SSNA1-203ENST00000463511 SMIM1B2RUZ4 78 aa14.44□□□□□ -0.1
SSNA1-203ENST00000463511 ZNF22P17026 224 aaPredicted RBP14.44□□□□□ -0.1
SSNA1-203ENST00000463511 CARD19Q96LW7 228 aa14.44□□□□□ -0.1
SSNA1-203ENST00000463511 CAMK2N2Q96S95 79 aa14.44□□□□□ -0.1
SSNA1-203ENST00000463511 MRPL35Q9NZE8 188 aaKnown RBP14.44□□□□□ -0.1
SSNA1-203ENST00000463511 F8VRH5 84 aa14.43□□□□□ -0.1
SSNA1-203ENST00000463511 H0Y8G0 127 aa14.43□□□□□ -0.1
SSNA1-203ENST00000463511 F8WDY8 70 aa14.42□□□□□ -0.1
SSNA1-203ENST00000463511 SPINK8P0C7L1 97 aa14.42□□□□□ -0.1
SSNA1-203ENST00000463511 H3BRM9 83 aa14.41□□□□□ -0.1
SSNA1-203ENST00000463511 REG3GQ6UW15 175 aa14.41□□□□□ -0.1
SSNA1-203ENST00000463511 SPINK6Q6UWN8 80 aa14.41□□□□□ -0.1
SSNA1-203ENST00000463511 MAP1LC3CQ9BXW4 147 aa14.41□□□□□ -0.1
SSNA1-203ENST00000463511 TOMM7Q9P0U1 55 aa14.41□□□□□ -0.1
SSNA1-203ENST00000463511 LINC00474Q9P2X8 69 aa14.41□□□□□ -0.1
SSNA1-203ENST00000463511 KRTAP10-8P60410 259 aa14.4□□□□□ -0.1
SSNA1-203ENST00000463511 C10orf25Q5T742 122 aa14.4□□□□□ -0.1
SSNA1-203ENST00000463511 Q8IZM0 81 aa14.4□□□□□ -0.1
SSNA1-203ENST00000463511 UNQ6190/PRO20217Q6UXQ8 127 aa14.39□□□□□ -0.11
SSNA1-203ENST00000463511 PKIGQ9Y2B9 76 aa14.39□□□□□ -0.11
SSNA1-203ENST00000463511 NDUFA1O15239 70 aa14.38□□□□□ -0.11
SSNA1-203ENST00000463511 PRSS2P07478 247 aa14.38□□□□□ -0.11
SSNA1-203ENST00000463511 TMEM170BQ5T4T1 132 aa14.38□□□□□ -0.11
SSNA1-203ENST00000463511 C2orf82Q6UX34 121 aa14.38□□□□□ -0.11
SSNA1-203ENST00000463511 C6orf226Q5I0X4 101 aa14.37□□□□□ -0.11
SSNA1-203ENST00000463511 COX7B2Q8TF08 81 aa14.37□□□□□ -0.11
SSNA1-203ENST00000463511 IGLV5-39A0A0G2JS06 123 aa14.36□□□□□ -0.11
SSNA1-203ENST00000463511 SYS1-DBNDD2H3BUS1 97 aa14.36□□□□□ -0.11
SSNA1-203ENST00000463511 RNF151Q2KHN1 245 aa14.36□□□□□ -0.11
SSNA1-203ENST00000463511 Q6ZRP5 223 aa14.36□□□□□ -0.11
SSNA1-203ENST00000463511 SRSF9Q13242 221 aaKnown RBP eCLIP14.35□□□□□ -0.11
SSNA1-203ENST00000463511 PMCHL2Q9BQD1 86 aa14.35□□□□□ -0.11
SSNA1-203ENST00000463511 C6orf48Q9UBA6 75 aa14.35□□□□□ -0.11
SSNA1-203ENST00000463511 TMEM223A0PJW6 202 aa14.34□□□□□ -0.11
SSNA1-203ENST00000463511 HIST3H2BBQ8N257 126 aa14.34□□□□□ -0.11
SSNA1-203ENST00000463511 S100A6P06703 90 aa14.33□□□□□ -0.12
SSNA1-203ENST00000463511 C3orf79P0CE67 100 aa14.33□□□□□ -0.12
SSNA1-203ENST00000463511 CKS1BP61024 79 aa14.33□□□□□ -0.12
SSNA1-203ENST00000463511 DPM2O94777 84 aa14.32□□□□□ -0.12
SSNA1-203ENST00000463511 TRBV30A0A0K0K1B3 111 aa14.31□□□□□ -0.12
SSNA1-203ENST00000463511 PLNP26678 52 aa14.31□□□□□ -0.12
SSNA1-203ENST00000463511 PET117Q6UWS5 81 aa14.31□□□□□ -0.12
SSNA1-203ENST00000463511 LOC107984640A0A0U1RRK4 108 aa14.3□□□□□ -0.12
SSNA1-203ENST00000463511 CXCL5P42830 114 aa14.3□□□□□ -0.12
SSNA1-203ENST00000463511 PTTG1IPP53801 180 aa14.3□□□□□ -0.12
SSNA1-203ENST00000463511 LINC01545Q5VT33 79 aa14.3□□□□□ -0.12
SSNA1-203ENST00000463511 IGKCP01834 107 aa14.29□□□□□ -0.12
SSNA1-203ENST00000463511 KRTDAPP60985 99 aa14.29□□□□□ -0.12
SSNA1-203ENST00000463511 SNRPEP62304 92 aaKnown RBP14.29□□□□□ -0.12
SSNA1-203ENST00000463511 GAGE2BQ13066 116 aa14.29□□□□□ -0.12
SSNA1-203ENST00000463511 C9orf116Q5BN46 136 aaPredicted RBP14.28□□□□□ -0.12
SSNA1-203ENST00000463511 HIST1H2BLQ99880 126 aa14.28□□□□□ -0.12
SSNA1-203ENST00000463511 C5orf52A6NGY3 159 aa14.27□□□□□ -0.13
SSNA1-203ENST00000463511 TLX1NBP0CAT3 122 aa14.27□□□□□ -0.13
SSNA1-203ENST00000463511 S100A2P29034 98 aa14.27□□□□□ -0.13
SSNA1-203ENST00000463511 A0A1W2PNN7 141 aa14.24□□□□□ -0.13
SSNA1-203ENST00000463511 RPL18AQ02543 176 aaKnown RBP14.24□□□□□ -0.13
SSNA1-203ENST00000463511 LPAP08519 4548 aa14.23□□□□□ -0.13
SSNA1-203ENST00000463511 NDUFC2-KCTD14E9PQ53 114 aa14.21□□□□□ -0.13
SSNA1-203ENST00000463511 PSORS1C2Q9UIG4 136 aa14.21□□□□□ -0.13
SSNA1-203ENST00000463511 LEPROTO15243 131 aa14.2□□□□□ -0.14
SSNA1-203ENST00000463511 ZNF625Q96I27 306 aaPredicted RBP14.2□□□□□ -0.14
SSNA1-203ENST00000463511 HERVK_113P61574 105 aa14.19□□□□□ -0.14
SSNA1-203ENST00000463511 GAGE2EQ4V326 116 aa14.18□□□□□ -0.14
SSNA1-203ENST00000463511 GAGE2DQ9UEU5 116 aa14.18□□□□□ -0.14
SSNA1-203ENST00000463511 TSPEAR-AS2P59090 65 aa14.17□□□□□ -0.14
SSNA1-203ENST00000463511 PLEKHB2Q96CS7 222 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms