RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 Q6ZRU5 148 aa8.31□□□□□ -1.08
R3HDM1-213ENST00000463230 LINC00526Q96FQ7 95 aa8.31□□□□□ -1.08
R3HDM1-213ENST00000463230 NDUFA1O15239 70 aa8.3□□□□□ -1.08
R3HDM1-213ENST00000463230 SMIM6P0DI80 62 aa8.3□□□□□ -1.08
R3HDM1-213ENST00000463230 A0A087WYN8 130 aa8.3□□□□□ -1.08
R3HDM1-213ENST00000463230 LINC00614P0C842 121 aa8.3□□□□□ -1.08
R3HDM1-213ENST00000463230 CHTF8P0CG12 524 aa8.3□□□□□ -1.08
R3HDM1-213ENST00000463230 DPH3Q96FX2 82 aa8.3□□□□□ -1.08
R3HDM1-213ENST00000463230 A0A096LNI7 61 aa8.29□□□□□ -1.08
R3HDM1-213ENST00000463230 HIST3H2BBQ8N257 126 aa8.29□□□□□ -1.08
R3HDM1-213ENST00000463230 MAJINQ3KP22 176 aa8.29□□□□□ -1.08
R3HDM1-213ENST00000463230 GEMIN7Q9H840 131 aaKnown RBP8.29□□□□□ -1.08
R3HDM1-213ENST00000463230 PTTG1IPP53801 180 aa8.28□□□□□ -1.08
R3HDM1-213ENST00000463230 RPL37AP61513 92 aaKnown RBP8.28□□□□□ -1.08
R3HDM1-213ENST00000463230 TINCRA0A1B0GVN0 87 aa8.27□□□□□ -1.08
R3HDM1-213ENST00000463230 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.27□□□□□ -1.08
R3HDM1-213ENST00000463230 HBDP02042 147 aa8.27□□□□□ -1.08
R3HDM1-213ENST00000463230 FABP4P15090 132 aa8.27□□□□□ -1.08
R3HDM1-213ENST00000463230 KIAA0087Q14695 138 aa8.27□□□□□ -1.08
R3HDM1-213ENST00000463230 PMVKQ15126 192 aa8.27□□□□□ -1.08
R3HDM1-213ENST00000463230 ZC2HC1BQ5TFG8 222 aa8.27□□□□□ -1.08
R3HDM1-213ENST00000463230 IGKV2-24A0A0C4DH68 120 aa8.27□□□□□ -1.09
R3HDM1-213ENST00000463230 TRBV30A0A0K0K1B3 111 aa8.27□□□□□ -1.09
R3HDM1-213ENST00000463230 TLX1NBP0CAT3 122 aa8.27□□□□□ -1.09
R3HDM1-213ENST00000463230 S100A2P29034 98 aa8.27□□□□□ -1.09
R3HDM1-213ENST00000463230 KRTAP10-4P60372 401 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-213ENST00000463230 PYY3Q5JQD4 70 aa8.27□□□□□ -1.09
R3HDM1-213ENST00000463230 CST9LQ9H4G1 147 aa8.27□□□□□ -1.09
R3HDM1-213ENST00000463230 IGLV5-45A0A087WSX0 123 aa8.26□□□□□ -1.09
R3HDM1-213ENST00000463230 C7orf33Q8WU49 177 aa8.26□□□□□ -1.09
R3HDM1-213ENST00000463230 CHCHD1Q96BP2 118 aaKnown RBP8.26□□□□□ -1.09
R3HDM1-213ENST00000463230 URB1-AS1Q96HZ7 61 aa8.26□□□□□ -1.09
R3HDM1-213ENST00000463230 ATP5LO75964 103 aa8.26□□□□□ -1.09
R3HDM1-213ENST00000463230 Q8IZM0 81 aa8.26□□□□□ -1.09
R3HDM1-213ENST00000463230 STPG4Q8N801 248 aa8.26□□□□□ -1.09
R3HDM1-213ENST00000463230 A0A096LNJ9 63 aa8.25□□□□□ -1.09
R3HDM1-213ENST00000463230 PRSS2P07478 247 aa8.25□□□□□ -1.09
R3HDM1-213ENST00000463230 PACRGQ96M98 296 aaPredicted RBP8.25□□□□□ -1.09
R3HDM1-213ENST00000463230 FAT1Q14517 4588 aa8.25□□□□□ -1.09
R3HDM1-213ENST00000463230 A0A0J9YXV3 536 aa8.25□□□□□ -1.09
R3HDM1-213ENST00000463230 LORP23490 312 aaPredicted RBP8.24□□□□□ -1.09
R3HDM1-213ENST00000463230 CXCL5P42830 114 aa8.24□□□□□ -1.09
R3HDM1-213ENST00000463230 HIST1H2BLQ99880 126 aa8.24□□□□□ -1.09
R3HDM1-213ENST00000463230 CDKN2A-AS1Q9UH64 79 aa8.24□□□□□ -1.09
R3HDM1-213ENST00000463230 LINC00587B1AMM8 73 aa8.23□□□□□ -1.09
R3HDM1-213ENST00000463230 GAGE2BQ13066 116 aa8.23□□□□□ -1.09
R3HDM1-213ENST00000463230 UNQ6190/PRO20217Q6UXQ8 127 aa8.23□□□□□ -1.09
R3HDM1-213ENST00000463230 LINC00469Q8N7U9 141 aa8.23□□□□□ -1.09
R3HDM1-213ENST00000463230 C6orf48Q9UBA6 75 aa8.23□□□□□ -1.09
R3HDM1-213ENST00000463230 H3BRM9 83 aa8.22□□□□□ -1.09
R3HDM1-213ENST00000463230 IGLC3P0DOY3 106 aa8.22□□□□□ -1.09
R3HDM1-213ENST00000463230 CKS1BP61024 79 aa8.22□□□□□ -1.09
R3HDM1-213ENST00000463230 RPL18AQ02543 176 aaKnown RBP8.22□□□□□ -1.09
R3HDM1-213ENST00000463230 SRRM2Q9UQ35 2752 aaKnown RBP8.22□□□□□ -1.09
R3HDM1-213ENST00000463230 C6orf226Q5I0X4 101 aa8.22□□□□□ -1.09
R3HDM1-213ENST00000463230 C10orf25Q5T742 122 aa8.22□□□□□ -1.09
R3HDM1-213ENST00000463230 SMIM1B2RUZ4 78 aa8.21□□□□□ -1.1
R3HDM1-213ENST00000463230 TOMM7Q9P0U1 55 aa8.2□□□□□ -1.1
R3HDM1-213ENST00000463230 NDUFC2-KCTD14E9PQ53 114 aa8.19□□□□□ -1.1
R3HDM1-213ENST00000463230 NUPR1O60356 82 aa8.19□□□□□ -1.1
R3HDM1-213ENST00000463230 S100A12P80511 92 aa8.19□□□□□ -1.1
R3HDM1-213ENST00000463230 F8VRH5 84 aa8.19□□□□□ -1.1
R3HDM1-213ENST00000463230 PMCHL1Q16048 86 aa8.19□□□□□ -1.1
R3HDM1-213ENST00000463230 COA6Q5JTJ3 125 aaKnown RBP8.19□□□□□ -1.1
R3HDM1-213ENST00000463230 C2orf82Q6UX34 121 aa8.19□□□□□ -1.1
R3HDM1-213ENST00000463230 BAGE3Q86Y29 109 aa8.19□□□□□ -1.1
R3HDM1-213ENST00000463230 COX7B2Q8TF08 81 aa8.18□□□□□ -1.1
R3HDM1-213ENST00000463230 TRAV12-1A0A0B4J245 112 aa8.18□□□□□ -1.1
R3HDM1-213ENST00000463230 KRTAP29-1A8MX34 341 aaPredicted RBP8.18□□□□□ -1.1
R3HDM1-213ENST00000463230 C9orf116Q5BN46 136 aaPredicted RBP8.18□□□□□ -1.1
R3HDM1-213ENST00000463230 Q6ZRP5 223 aa8.18□□□□□ -1.1
R3HDM1-213ENST00000463230 HSBP1O75506 76 aa8.17□□□□□ -1.1
R3HDM1-213ENST00000463230 OXTP01178 125 aa8.17□□□□□ -1.1
R3HDM1-213ENST00000463230 A0A1W2PNN7 141 aa8.17□□□□□ -1.1
R3HDM1-213ENST00000463230 PRR3P79522 188 aaKnown RBP8.17□□□□□ -1.1
R3HDM1-213ENST00000463230 IFI27L1Q96BM0 104 aa8.17□□□□□ -1.1
R3HDM1-213ENST00000463230 FLG2Q5D862 2391 aaPredicted RBP8.16□□□□□ -1.1
R3HDM1-213ENST00000463230 IGLV5-39A0A0G2JS06 123 aa8.16□□□□□ -1.1
R3HDM1-213ENST00000463230 ZNF22P17026 224 aaPredicted RBP8.16□□□□□ -1.1
R3HDM1-213ENST00000463230 PKHD1L1Q86WI1 4243 aa8.16□□□□□ -1.1
R3HDM1-213ENST00000463230 SPINK8P0C7L1 97 aa8.15□□□□□ -1.1
R3HDM1-213ENST00000463230 LINC00310P59036 64 aa8.15□□□□□ -1.1
R3HDM1-213ENST00000463230 SFTA2Q6UW10 78 aa8.15□□□□□ -1.1
R3HDM1-213ENST00000463230 PRO1933Q9H354 126 aa8.15□□□□□ -1.1
R3HDM1-213ENST00000463230 CHTOPQ9Y3Y2 248 aaKnown RBP8.15□□□□□ -1.1
R3HDM1-213ENST00000463230 JOSD1Q15040 202 aaPredicted RBP8.14□□□□□ -1.11
R3HDM1-213ENST00000463230 GAGE2EQ4V326 116 aa8.14□□□□□ -1.11
R3HDM1-213ENST00000463230 GAGE2DQ9UEU5 116 aa8.14□□□□□ -1.11
R3HDM1-213ENST00000463230 SERF1AO75920 110 aa8.13□□□□□ -1.11
R3HDM1-213ENST00000463230 CTAG1AP78358 180 aa8.13□□□□□ -1.11
R3HDM1-213ENST00000463230 C11orf86A6NJI1 115 aa8.13□□□□□ -1.11
R3HDM1-213ENST00000463230 HNRNPA3P51991 378 aaKnown RBP8.12□□□□□ -1.11
R3HDM1-213ENST00000463230 HSPB8Q9UJY1 196 aa8.11□□□□□ -1.11
R3HDM1-213ENST00000463230 C9orf129Q5T035 196 aaKnown RBP8.11□□□□□ -1.11
R3HDM1-213ENST00000463230 TMEM170BQ5T4T1 132 aa8.11□□□□□ -1.11
R3HDM1-213ENST00000463230 FAM19A2Q8N3H0 131 aa8.11□□□□□ -1.11
R3HDM1-213ENST00000463230 DMBT1Q9UGM3 2413 aaPredicted RBP8.1□□□□□ -1.11
R3HDM1-213ENST00000463230 LEPROTL1O95214 131 aa8.1□□□□□ -1.11
R3HDM1-213ENST00000463230 SCGB1D1O95968 90 aa8.1□□□□□ -1.11
R3HDM1-213ENST00000463230 SPINK6Q6UWN8 80 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms