RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 TSHBP01222 138 aa9.95□□□□□ -0.82
SND1-203ENST00000463020 CRPP02741 224 aa9.95□□□□□ -0.82
SND1-203ENST00000463020 RPL36AP83881 106 aaKnown RBP9.95□□□□□ -0.82
SND1-203ENST00000463020 RPL36ALQ969Q0 106 aaKnown RBP9.95□□□□□ -0.82
SND1-203ENST00000463020 TRBV10-1A0A0K0K1A3 114 aa9.94□□□□□ -0.82
SND1-203ENST00000463020 SLPIP03973 132 aa9.94□□□□□ -0.82
SND1-203ENST00000463020 DGAT2L7PQ6IED9 249 aa9.94□□□□□ -0.82
SND1-203ENST00000463020 C20orf203Q8NBC4 194 aa9.94□□□□□ -0.82
SND1-203ENST00000463020 CST9LQ9H4G1 147 aa9.94□□□□□ -0.82
SND1-203ENST00000463020 E9PLD3 99 aa9.93□□□□□ -0.82
SND1-203ENST00000463020 RPL39P62891 51 aaKnown RBP9.93□□□□□ -0.82
SND1-203ENST00000463020 TAL2Q16559 108 aa9.93□□□□□ -0.82
SND1-203ENST00000463020 CHCHD5Q9BSY4 110 aa9.93□□□□□ -0.82
SND1-203ENST00000463020 PRR34Q9NV39 138 aa9.93□□□□□ -0.82
SND1-203ENST00000463020 LPAP08519 4548 aa9.93□□□□□ -0.82
SND1-203ENST00000463020 TAX1BP3O14907 124 aa9.92□□□□□ -0.82
SND1-203ENST00000463020 NPSP0C0P6 89 aa9.92□□□□□ -0.82
SND1-203ENST00000463020 LINC00269Q8N2A0 174 aa9.92□□□□□ -0.82
SND1-203ENST00000463020 IGLV10-54A0A075B6I4 117 aa9.91□□□□□ -0.82
SND1-203ENST00000463020 TRBV25-1A0A075B6N4 114 aa9.91□□□□□ -0.82
SND1-203ENST00000463020 A0A087WYN8 130 aa9.91□□□□□ -0.82
SND1-203ENST00000463020 H3BRM9 83 aa9.91□□□□□ -0.82
SND1-203ENST00000463020 RBX1P62877 108 aa9.91□□□□□ -0.82
SND1-203ENST00000463020 GAGE6Q13070 117 aa9.91□□□□□ -0.82
SND1-203ENST00000463020 VAMP3Q15836 100 aa9.91□□□□□ -0.82
SND1-203ENST00000463020 MIAQ16674 131 aa9.91□□□□□ -0.82
SND1-203ENST00000463020 PYGO1Q9Y3Y4 419 aa9.91□□□□□ -0.82
SND1-203ENST00000463020 MYMXA0A1B0GTQ4 84 aa9.9□□□□□ -0.82
SND1-203ENST00000463020 VCX2Q9H322 139 aa9.9□□□□□ -0.82
SND1-203ENST00000463020 C11orf86A6NJI1 115 aa9.89□□□□□ -0.83
SND1-203ENST00000463020 PTTG1IPP53801 180 aa9.89□□□□□ -0.83
SND1-203ENST00000463020 CNBPP62633 177 aaKnown RBP9.89□□□□□ -0.83
SND1-203ENST00000463020 UBE2V1Q13404 147 aa9.89□□□□□ -0.83
SND1-203ENST00000463020 COTL1Q14019 142 aa9.89□□□□□ -0.83
SND1-203ENST00000463020 SPACA4Q8TDM5 124 aa9.89□□□□□ -0.83
SND1-203ENST00000463020 IGLV4-69A0A075B6H9 119 aa9.88□□□□□ -0.83
SND1-203ENST00000463020 SMIM13P0DJ93 91 aa9.88□□□□□ -0.83
SND1-203ENST00000463020 TTTY13Q9BZ97 58 aa9.88□□□□□ -0.83
SND1-203ENST00000463020 SPANXA1Q9NS26 97 aa9.88□□□□□ -0.83
SND1-203ENST00000463020 SMAGPQ0VAQ4 97 aa9.87□□□□□ -0.83
SND1-203ENST00000463020 TMEM170BQ5T4T1 132 aa9.87□□□□□ -0.83
SND1-203ENST00000463020 CEND1Q8N111 149 aa9.87□□□□□ -0.83
SND1-203ENST00000463020 IGLV4-3A0A075B6K6 122 aa9.86□□□□□ -0.83
SND1-203ENST00000463020 C9orf118A6NHY6 69 aa9.86□□□□□ -0.83
SND1-203ENST00000463020 ZNF815PA8K554 130 aa9.86□□□□□ -0.83
SND1-203ENST00000463020 Q6ZVH6 145 aa9.86□□□□□ -0.83
SND1-203ENST00000463020 LINC01600Q96MT4 127 aa9.86□□□□□ -0.83
SND1-203ENST00000463020 HIST1H4GQ99525 98 aa9.86□□□□□ -0.83
SND1-203ENST00000463020 PLAC8Q9NZF1 115 aa9.85□□□□□ -0.83
SND1-203ENST00000463020 IGLV4-60A0A075B6I1 120 aa9.84□□□□□ -0.83
SND1-203ENST00000463020 IGHV3-64A0A075B6Q5 118 aa9.84□□□□□ -0.83
SND1-203ENST00000463020 REG3AQ06141 175 aa9.84□□□□□ -0.83
SND1-203ENST00000463020 SCGB1D4Q6XE38 83 aa9.84□□□□□ -0.83
SND1-203ENST00000463020 LEPROTO15243 131 aa9.83□□□□□ -0.84
SND1-203ENST00000463020 LGALS3P17931 250 aaKnown RBP9.83□□□□□ -0.84
SND1-203ENST00000463020 PLEKHB2Q96CS7 222 aa9.83□□□□□ -0.84
SND1-203ENST00000463020 DPH3Q96FX2 82 aa9.83□□□□□ -0.84
SND1-203ENST00000463020 AMELXQ99217 191 aa9.83□□□□□ -0.84
SND1-203ENST00000463020 OPRPNQ99935 248 aaPredicted RBP9.83□□□□□ -0.84
SND1-203ENST00000463020 TIMM21Q9BVV7 248 aa9.83□□□□□ -0.84
SND1-203ENST00000463020 PRR3P79522 188 aaKnown RBP9.82□□□□□ -0.84
SND1-203ENST00000463020 AMMECR1LQ6DCA0 310 aa9.82□□□□□ -0.84
SND1-203ENST00000463020 GTF2H5Q6ZYL4 71 aa9.82□□□□□ -0.84
SND1-203ENST00000463020 C15orf56Q8N910 161 aa9.82□□□□□ -0.84
SND1-203ENST00000463020 TMEM238LA0A1B0GVL6 79 aa9.81□□□□□ -0.84
SND1-203ENST00000463020 TMEM223A0PJW6 202 aa9.81□□□□□ -0.84
SND1-203ENST00000463020 A6NJY4 79 aa9.81□□□□□ -0.84
SND1-203ENST00000463020 FXYD2P54710 66 aa9.81□□□□□ -0.84
SND1-203ENST00000463020 KRTAP10-8P60410 259 aa9.81□□□□□ -0.84
SND1-203ENST00000463020 UBE2D4Q9Y2X8 147 aa9.81□□□□□ -0.84
SND1-203ENST00000463020 A0A0J9YXV3 536 aa9.8□□□□□ -0.84
SND1-203ENST00000463020 J3QQQ9 107 aa9.8□□□□□ -0.84
SND1-203ENST00000463020 CCL25O15444 150 aa9.8□□□□□ -0.84
SND1-203ENST00000463020 ZNF22P17026 224 aaPredicted RBP9.8□□□□□ -0.84
SND1-203ENST00000463020 MRPS36P82909 103 aaKnown RBP9.8□□□□□ -0.84
SND1-203ENST00000463020 COX6A2Q02221 97 aa9.8□□□□□ -0.84
SND1-203ENST00000463020 RAB37Q96AX2 223 aa9.8□□□□□ -0.84
SND1-203ENST00000463020 NHP2Q9NX24 153 aaKnown RBP9.8□□□□□ -0.84
SND1-203ENST00000463020 GAGE10A6NGK3 116 aa9.79□□□□□ -0.84
SND1-203ENST00000463020 H3BUT2 72 aa9.79□□□□□ -0.84
SND1-203ENST00000463020 SRSF9Q13242 221 aaKnown RBP eCLIP9.79□□□□□ -0.84
SND1-203ENST00000463020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.78□□□□□ -0.84
SND1-203ENST00000463020 TINCRA0A1B0GVN0 87 aa9.78□□□□□ -0.84
SND1-203ENST00000463020 IGKV2-29A2NJV5 120 aaPredicted RBP9.78□□□□□ -0.84
SND1-203ENST00000463020 FABP2P12104 132 aa9.78□□□□□ -0.84
SND1-203ENST00000463020 IGKV2-24A0A0C4DH68 120 aa9.77□□□□□ -0.85
SND1-203ENST00000463020 HIGD2BQ4VC39 106 aa9.77□□□□□ -0.85
SND1-203ENST00000463020 GEMIN7Q9H840 131 aaKnown RBP9.77□□□□□ -0.85
SND1-203ENST00000463020 SPANXB1Q9NS25 103 aaPredicted RBP9.77□□□□□ -0.85
SND1-203ENST00000463020 A0A1W2PPM0 123 aa9.76□□□□□ -0.85
SND1-203ENST00000463020 K7EP34 96 aa9.76□□□□□ -0.85
SND1-203ENST00000463020 C7orf33Q8WU49 177 aa9.76□□□□□ -0.85
SND1-203ENST00000463020 MUC2Q02817 5179 aa9.75□□□□□ -0.85
SND1-203ENST00000463020 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.75□□□□□ -0.85
SND1-203ENST00000463020 TRAV8-4A0A0B4J246 113 aa9.75□□□□□ -0.85
SND1-203ENST00000463020 GAGE12HA6NDE8 117 aa9.75□□□□□ -0.85
SND1-203ENST00000463020 Q6ZUT4 128 aa9.75□□□□□ -0.85
SND1-203ENST00000463020 OR5A1Q8NGJ0 315 aa9.75□□□□□ -0.85
SND1-203ENST00000463020 A0A096LNI7 61 aa9.74□□□□□ -0.85
SND1-203ENST00000463020 A0A1B0GWB2 263 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms