RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 TINCRA0A1B0GVN0 87 aa11.75□□□□□ -0.53
SLC6A1-204ENST00000462473 LINC00614P0C842 121 aa11.75□□□□□ -0.53
SLC6A1-204ENST00000462473 PMVKQ15126 192 aa11.75□□□□□ -0.53
SLC6A1-204ENST00000462473 HERC1Q15751 4861 aa11.75□□□□□ -0.53
SLC6A1-204ENST00000462473 NDUFC2-KCTD14E9PQ53 114 aa11.73□□□□□ -0.53
SLC6A1-204ENST00000462473 PHF5AQ7RTV0 110 aaKnown RBP11.73□□□□□ -0.53
SLC6A1-204ENST00000462473 URB1-AS1Q96HZ7 61 aa11.73□□□□□ -0.53
SLC6A1-204ENST00000462473 LRP1Q07954 4544 aaKnown RBP11.73□□□□□ -0.53
SLC6A1-204ENST00000462473 PKHD1L1Q86WI1 4243 aa11.73□□□□□ -0.53
SLC6A1-204ENST00000462473 RAB5BP61020 215 aa11.72□□□□□ -0.53
SLC6A1-204ENST00000462473 FAM168BA1KXE4 195 aa11.71□□□□□ -0.53
SLC6A1-204ENST00000462473 FAM19A5Q7Z5A7 132 aaPredicted RBP11.71□□□□□ -0.53
SLC6A1-204ENST00000462473 IGLV5-45A0A087WSX0 123 aa11.7□□□□□ -0.54
SLC6A1-204ENST00000462473 A0A096LNJ9 63 aa11.7□□□□□ -0.54
SLC6A1-204ENST00000462473 SMIM1B2RUZ4 78 aa11.7□□□□□ -0.54
SLC6A1-204ENST00000462473 HBDP02042 147 aa11.7□□□□□ -0.54
SLC6A1-204ENST00000462473 NDUFA6P56556 154 aa11.7□□□□□ -0.54
SLC6A1-204ENST00000462473 PDZD11Q5EBL8 140 aa11.7□□□□□ -0.54
SLC6A1-204ENST00000462473 YPEL4Q96NS1 127 aa11.7□□□□□ -0.54
SLC6A1-204ENST00000462473 FAT3Q8TDW7 4589 aa11.69□□□□□ -0.54
SLC6A1-204ENST00000462473 CXCL5P42830 114 aa11.69□□□□□ -0.54
SLC6A1-204ENST00000462473 PMCHL1Q16048 86 aa11.69□□□□□ -0.54
SLC6A1-204ENST00000462473 SPINK6Q6UWN8 80 aa11.69□□□□□ -0.54
SLC6A1-204ENST00000462473 F8VRH5 84 aa11.68□□□□□ -0.54
SLC6A1-204ENST00000462473 COX7B2Q8TF08 81 aa11.68□□□□□ -0.54
SLC6A1-204ENST00000462473 PSORS1C2Q9UIG4 136 aa11.68□□□□□ -0.54
SLC6A1-204ENST00000462473 H3BRM9 83 aa11.67□□□□□ -0.54
SLC6A1-204ENST00000462473 SPINK8P0C7L1 97 aa11.67□□□□□ -0.54
SLC6A1-204ENST00000462473 C9orf129Q5T035 196 aaKnown RBP11.67□□□□□ -0.54
SLC6A1-204ENST00000462473 CBLN2Q8IUK8 224 aa11.66□□□□□ -0.54
SLC6A1-204ENST00000462473 ATP5LO75964 103 aa11.65□□□□□ -0.54
SLC6A1-204ENST00000462473 IGLC3P0DOY3 106 aa11.65□□□□□ -0.54
SLC6A1-204ENST00000462473 SRSF9Q13242 221 aaKnown RBP eCLIP11.65□□□□□ -0.54
SLC6A1-204ENST00000462473 C1orf137Q5JT78 98 aa11.65□□□□□ -0.54
SLC6A1-204ENST00000462473 M0QXV9 152 aa11.64□□□□□ -0.55
SLC6A1-204ENST00000462473 SERTAD4-AS1Q5TG53 156 aa11.64□□□□□ -0.55
SLC6A1-204ENST00000462473 SLC7A5P1Q8MH63 180 aa11.64□□□□□ -0.55
SLC6A1-204ENST00000462473 MT1HL1P0DM35 61 aa11.63□□□□□ -0.55
SLC6A1-204ENST00000462473 REG3GQ6UW15 175 aa11.63□□□□□ -0.55
SLC6A1-204ENST00000462473 KRTAP7-1Q8IUC3 87 aa11.63□□□□□ -0.55
SLC6A1-204ENST00000462473 XAGE1AQ9HD64 81 aa11.63□□□□□ -0.55
SLC6A1-204ENST00000462473 UBE2BP63146 152 aa11.62□□□□□ -0.55
SLC6A1-204ENST00000462473 BAGE3Q86Y29 109 aa11.62□□□□□ -0.55
SLC6A1-204ENST00000462473 CHCHD1Q96BP2 118 aaKnown RBP11.62□□□□□ -0.55
SLC6A1-204ENST00000462473 ZNF22P17026 224 aaPredicted RBP11.6□□□□□ -0.55
SLC6A1-204ENST00000462473 KRTAP11-1Q8IUC1 163 aa11.6□□□□□ -0.55
SLC6A1-204ENST00000462473 LINC01600Q96MT4 127 aa11.6□□□□□ -0.55
SLC6A1-204ENST00000462473 IGLV7-43P04211 117 aa11.58□□□□□ -0.56
SLC6A1-204ENST00000462473 IGLV5-39A0A0G2JS06 123 aa11.57□□□□□ -0.56
SLC6A1-204ENST00000462473 TRGC2P03986 189 aa11.57□□□□□ -0.56
SLC6A1-204ENST00000462473 TMEM170BQ5T4T1 132 aa11.57□□□□□ -0.56
SLC6A1-204ENST00000462473 CHTOPQ9Y3Y2 248 aaKnown RBP11.57□□□□□ -0.56
SLC6A1-204ENST00000462473 C22orf24Q9Y442 160 aa11.57□□□□□ -0.56
SLC6A1-204ENST00000462473 C11orf86A6NJI1 115 aa11.56□□□□□ -0.56
SLC6A1-204ENST00000462473 HSBP1O75506 76 aa11.56□□□□□ -0.56
SLC6A1-204ENST00000462473 IFI27L1Q96BM0 104 aa11.56□□□□□ -0.56
SLC6A1-204ENST00000462473 LBHQ53QV2 105 aaPredicted RBP11.55□□□□□ -0.56
SLC6A1-204ENST00000462473 FAM19A2Q8N3H0 131 aa11.54□□□□□ -0.56
SLC6A1-204ENST00000462473 TRAV12-1A0A0B4J245 112 aa11.53□□□□□ -0.56
SLC6A1-204ENST00000462473 PFN2P35080 140 aa11.52□□□□□ -0.57
SLC6A1-204ENST00000462473 DIRC1Q969H9 104 aa11.52□□□□□ -0.57
SLC6A1-204ENST00000462473 TP73-AS1Q9UF72 201 aa11.51□□□□□ -0.57
SLC6A1-204ENST00000462473 PLA2G2DQ9UNK4 145 aa11.51□□□□□ -0.57
SLC6A1-204ENST00000462473 MRPL55Q7Z7F7 128 aaKnown RBP11.5□□□□□ -0.57
SLC6A1-204ENST00000462473 COLCA2A8K830 154 aa11.49□□□□□ -0.57
SLC6A1-204ENST00000462473 KRTAP10-8P60410 259 aa11.49□□□□□ -0.57
SLC6A1-204ENST00000462473 ODF1Q14990 250 aa11.49□□□□□ -0.57
SLC6A1-204ENST00000462473 ZNF625Q96I27 306 aaPredicted RBP11.49□□□□□ -0.57
SLC6A1-204ENST00000462473 ERG28Q9UKR5 140 aa11.49□□□□□ -0.57
SLC6A1-204ENST00000462473 SERF1AO75920 110 aa11.48□□□□□ -0.57
SLC6A1-204ENST00000462473 SFTA2Q6UW10 78 aa11.48□□□□□ -0.57
SLC6A1-204ENST00000462473 TMEM223A0PJW6 202 aa11.47□□□□□ -0.57
SLC6A1-204ENST00000462473 H0Y9J4 135 aa11.47□□□□□ -0.57
SLC6A1-204ENST00000462473 NUPR1O60356 82 aa11.47□□□□□ -0.57
SLC6A1-204ENST00000462473 LEPROTL1O95214 131 aa11.47□□□□□ -0.57
SLC6A1-204ENST00000462473 H0Y8G0 127 aa11.46□□□□□ -0.57
SLC6A1-204ENST00000462473 COX17Q14061 63 aa11.46□□□□□ -0.57
SLC6A1-204ENST00000462473 NKAPP1Q8N9T2 125 aa11.46□□□□□ -0.57
SLC6A1-204ENST00000462473 LINC00167Q96N53 147 aa11.46□□□□□ -0.57
SLC6A1-204ENST00000462473 LINC00310P59036 64 aa11.45□□□□□ -0.58
SLC6A1-204ENST00000462473 TNXBP22105 4242 aa11.44□□□□□ -0.58
SLC6A1-204ENST00000462473 IGLV5-37A0A075B6J1 123 aa11.44□□□□□ -0.58
SLC6A1-204ENST00000462473 GAGE10A6NGK3 116 aa11.44□□□□□ -0.58
SLC6A1-204ENST00000462473 RPL37AP8A6NKH3 93 aa11.44□□□□□ -0.58
SLC6A1-204ENST00000462473 ZNF861PO60384 105 aa11.43□□□□□ -0.58
SLC6A1-204ENST00000462473 SND1-IT1Q9HBX3 110 aa11.43□□□□□ -0.58
SLC6A1-204ENST00000462473 FABP4P15090 132 aa11.41□□□□□ -0.58
SLC6A1-204ENST00000462473 HSPB8Q9UJY1 196 aa11.41□□□□□ -0.58
SLC6A1-204ENST00000462473 BCE1O60756 84 aa11.4□□□□□ -0.58
SLC6A1-204ENST00000462473 LINC00158P58513 81 aa11.4□□□□□ -0.58
SLC6A1-204ENST00000462473 RPL24P83731 157 aaKnown RBP11.4□□□□□ -0.58
SLC6A1-204ENST00000462473 SCO1O75880 301 aa11.39□□□□□ -0.59
SLC6A1-204ENST00000462473 PRR26Q8N8Z3 221 aa11.39□□□□□ -0.59
SLC6A1-204ENST00000462473 A0A0U1RRA0 63 aa11.38□□□□□ -0.59
SLC6A1-204ENST00000462473 RPL28P46779 137 aaKnown RBP11.38□□□□□ -0.59
SLC6A1-204ENST00000462473 IGKV2-28A0A075B6P5 120 aa11.37□□□□□ -0.59
SLC6A1-204ENST00000462473 ATP6V1G1O75348 118 aa11.37□□□□□ -0.59
SLC6A1-204ENST00000462473 IGKV2D-28P01615 120 aa11.37□□□□□ -0.59
SLC6A1-204ENST00000462473 VPREB1P12018 145 aa11.37□□□□□ -0.59
SLC6A1-204ENST00000462473 MEIG1Q5JSS6 88 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms