RNA–Protein interactions for RNA: ENST00000462391.5

NPM3-202, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 3

Gene NPM3, Length 481 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-202ENST00000462391 KIAA0087Q14695 138 aa13.24□□□□□ -0.29
NPM3-202ENST00000462391 Q6ZRP5 223 aa13.24□□□□□ -0.29
NPM3-202ENST00000462391 FAM19A3Q7Z5A8 133 aa13.24□□□□□ -0.29
NPM3-202ENST00000462391 TIMM17AQ99595 171 aa13.24□□□□□ -0.29
NPM3-202ENST00000462391 A0A1W2PNN7 141 aa13.23□□□□□ -0.29
NPM3-202ENST00000462391 NUPR1O60356 82 aa13.23□□□□□ -0.29
NPM3-202ENST00000462391 SERF1AO75920 110 aa13.23□□□□□ -0.29
NPM3-202ENST00000462391 LINC00614P0C842 121 aa13.23□□□□□ -0.29
NPM3-202ENST00000462391 SEC11AP67812 179 aa13.23□□□□□ -0.29
NPM3-202ENST00000462391 C9orf116Q5BN46 136 aaPredicted RBP13.23□□□□□ -0.29
NPM3-202ENST00000462391 C10orf25Q5T742 122 aa13.23□□□□□ -0.29
NPM3-202ENST00000462391 UNQ6190/PRO20217Q6UXQ8 127 aa13.23□□□□□ -0.29
NPM3-202ENST00000462391 TOMM6Q96B49 74 aa13.23□□□□□ -0.29
NPM3-202ENST00000462391 LINC01549A6NIU2 74 aa13.22□□□□□ -0.29
NPM3-202ENST00000462391 LINC00310P59036 64 aa13.22□□□□□ -0.29
NPM3-202ENST00000462391 ZC2HC1BQ5TFG8 222 aa13.22□□□□□ -0.29
NPM3-202ENST00000462391 URB1-AS1Q96HZ7 61 aa13.22□□□□□ -0.29
NPM3-202ENST00000462391 C6orf48Q9UBA6 75 aa13.22□□□□□ -0.29
NPM3-202ENST00000462391 TRBV30A0A0K0K1B3 111 aa13.21□□□□□ -0.29
NPM3-202ENST00000462391 FA2HQ7L5A8 372 aa13.21□□□□□ -0.29
NPM3-202ENST00000462391 CHCHD1Q96BP2 118 aaKnown RBP13.21□□□□□ -0.29
NPM3-202ENST00000462391 ERASQ7Z444 233 aa13.2□□□□□ -0.3
NPM3-202ENST00000462391 MT1HL1P0DM35 61 aa13.19□□□□□ -0.3
NPM3-202ENST00000462391 HERVK_113P63121 156 aa13.19□□□□□ -0.3
NPM3-202ENST00000462391 SPINK6Q6UWN8 80 aa13.19□□□□□ -0.3
NPM3-202ENST00000462391 HIST3H2BBQ8N257 126 aa13.19□□□□□ -0.3
NPM3-202ENST00000462391 LINC01546A6NGU7 62 aa13.18□□□□□ -0.3
NPM3-202ENST00000462391 PACRGQ96M98 296 aaPredicted RBP13.18□□□□□ -0.3
NPM3-202ENST00000462391 SCGB3A1Q96QR1 104 aa13.18□□□□□ -0.3
NPM3-202ENST00000462391 HSBP1O75506 76 aa13.17□□□□□ -0.3
NPM3-202ENST00000462391 PRSS2P07478 247 aa13.17□□□□□ -0.3
NPM3-202ENST00000462391 PDZD11Q5EBL8 140 aa13.17□□□□□ -0.3
NPM3-202ENST00000462391 GEMIN7Q9H840 131 aaKnown RBP13.17□□□□□ -0.3
NPM3-202ENST00000462391 S100A2P29034 98 aa13.16□□□□□ -0.3
NPM3-202ENST00000462391 LOC105371267A0A1B0GV96 52 aa13.15□□□□□ -0.3
NPM3-202ENST00000462391 NDUFC2-KCTD14E9PQ53 114 aa13.15□□□□□ -0.3
NPM3-202ENST00000462391 SRSF9Q13242 221 aaKnown RBP eCLIP13.15□□□□□ -0.3
NPM3-202ENST00000462391 C2orf82Q6UX34 121 aa13.15□□□□□ -0.3
NPM3-202ENST00000462391 Q8IZM0 81 aa13.15□□□□□ -0.3
NPM3-202ENST00000462391 CKS1BP61024 79 aa13.14□□□□□ -0.31
NPM3-202ENST00000462391 REG3GQ6UW15 175 aa13.14□□□□□ -0.31
NPM3-202ENST00000462391 CDKN2A-AS1Q9UH64 79 aa13.14□□□□□ -0.31
NPM3-202ENST00000462391 GAGE2EQ4V326 116 aa13.13□□□□□ -0.31
NPM3-202ENST00000462391 C6orf226Q5I0X4 101 aa13.13□□□□□ -0.31
NPM3-202ENST00000462391 PHF5AQ7RTV0 110 aaKnown RBP13.13□□□□□ -0.31
NPM3-202ENST00000462391 FAM19A2Q8N3H0 131 aa13.13□□□□□ -0.31
NPM3-202ENST00000462391 LINC01600Q96MT4 127 aa13.13□□□□□ -0.31
NPM3-202ENST00000462391 TOMM7Q9P0U1 55 aa13.13□□□□□ -0.31
NPM3-202ENST00000462391 GAGE2DQ9UEU5 116 aa13.13□□□□□ -0.31
NPM3-202ENST00000462391 PSORS1C2Q9UIG4 136 aa13.13□□□□□ -0.31
NPM3-202ENST00000462391 HIST1H2BLQ99880 126 aa13.11□□□□□ -0.31
NPM3-202ENST00000462391 TINCRA0A1B0GVN0 87 aa13.1□□□□□ -0.31
NPM3-202ENST00000462391 FAM168BA1KXE4 195 aa13.1□□□□□ -0.31
NPM3-202ENST00000462391 FABP4P15090 132 aa13.1□□□□□ -0.31
NPM3-202ENST00000462391 PMCHL1Q16048 86 aa13.1□□□□□ -0.31
NPM3-202ENST00000462391 FAM19A5Q7Z5A7 132 aaPredicted RBP13.09□□□□□ -0.31
NPM3-202ENST00000462391 LINC00469Q8N7U9 141 aa13.09□□□□□ -0.31
NPM3-202ENST00000462391 PLA2G2DQ9UNK4 145 aa13.09□□□□□ -0.31
NPM3-202ENST00000462391 HMCN2Q8NDA2 5059 aa13.09□□□□□ -0.31
NPM3-202ENST00000462391 CXCL5P42830 114 aa13.08□□□□□ -0.32
NPM3-202ENST00000462391 CST9LQ9H4G1 147 aa13.08□□□□□ -0.32
NPM3-202ENST00000462391 TNXBP22105 4242 aa13.08□□□□□ -0.32
NPM3-202ENST00000462391 IGLV5-45A0A087WSX0 123 aa13.07□□□□□ -0.32
NPM3-202ENST00000462391 F8VRH5 84 aa13.07□□□□□ -0.32
NPM3-202ENST00000462391 HBDP02042 147 aa13.07□□□□□ -0.32
NPM3-202ENST00000462391 PMVKQ15126 192 aa13.07□□□□□ -0.32
NPM3-202ENST00000462391 C1orf137Q5JT78 98 aa13.07□□□□□ -0.32
NPM3-202ENST00000462391 A0A096LNJ9 63 aa13.06□□□□□ -0.32
NPM3-202ENST00000462391 SMIM1B2RUZ4 78 aa13.05□□□□□ -0.32
NPM3-202ENST00000462391 M0QXV9 152 aa13.05□□□□□ -0.32
NPM3-202ENST00000462391 C9orf129Q5T035 196 aaKnown RBP13.05□□□□□ -0.32
NPM3-202ENST00000462391 LEPROTL1O95214 131 aa13.04□□□□□ -0.32
NPM3-202ENST00000462391 KRTAP7-1Q8IUC3 87 aa13.04□□□□□ -0.32
NPM3-202ENST00000462391 AKR1D1P51857 326 aa13.02□□□□□ -0.33
NPM3-202ENST00000462391 HSPB8Q9UJY1 196 aa13.02□□□□□ -0.33
NPM3-202ENST00000462391 IGLV7-43P04211 117 aa13.01□□□□□ -0.33
NPM3-202ENST00000462391 UBE2BP63146 152 aa13.01□□□□□ -0.33
NPM3-202ENST00000462391 ODF1Q14990 250 aa13.01□□□□□ -0.33
NPM3-202ENST00000462391 COX7B2Q8TF08 81 aa13.01□□□□□ -0.33
NPM3-202ENST00000462391 H3BRM9 83 aa13□□□□□ -0.33
NPM3-202ENST00000462391 KRTAP10-8P60410 259 aa13□□□□□ -0.33
NPM3-202ENST00000462391 DIRC1Q969H9 104 aa13□□□□□ -0.33
NPM3-202ENST00000462391 KRTAP11-1Q8IUC1 163 aa12.99□□□□□ -0.33
NPM3-202ENST00000462391 IFI27L1Q96BM0 104 aa12.98□□□□□ -0.33
NPM3-202ENST00000462391 ATP5LO75964 103 aa12.97□□□□□ -0.33
NPM3-202ENST00000462391 SPINK8P0C7L1 97 aa12.97□□□□□ -0.33
NPM3-202ENST00000462391 C3orf79P0CE67 100 aa12.97□□□□□ -0.33
NPM3-202ENST00000462391 IGLC3P0DOY3 106 aa12.97□□□□□ -0.33
NPM3-202ENST00000462391 XAGE1AQ9HD64 81 aa12.97□□□□□ -0.33
NPM3-202ENST00000462391 KRTDAPP60985 99 aa12.96□□□□□ -0.33
NPM3-202ENST00000462391 MAP1LC3CQ9BXW4 147 aa12.96□□□□□ -0.33
NPM3-202ENST00000462391 LBHQ53QV2 105 aaPredicted RBP12.95□□□□□ -0.34
NPM3-202ENST00000462391 TP73-AS1Q9UF72 201 aa12.94□□□□□ -0.34
NPM3-202ENST00000462391 C22orf24Q9Y442 160 aa12.94□□□□□ -0.34
NPM3-202ENST00000462391 H0Y9J4 135 aa12.93□□□□□ -0.34
NPM3-202ENST00000462391 SYS1-DBNDD2H3BUS1 97 aa12.93□□□□□ -0.34
NPM3-202ENST00000462391 IGLV5-39A0A0G2JS06 123 aa12.92□□□□□ -0.34
NPM3-202ENST00000462391 JOSD1Q15040 202 aaPredicted RBP12.92□□□□□ -0.34
NPM3-202ENST00000462391 PET117Q6UWS5 81 aa12.92□□□□□ -0.34
NPM3-202ENST00000462391 SCGB1D1O95968 90 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms