RNA–Protein interactions for RNA: ENST00000462202.2

TRIM8-202, Transcript of tripartite motif containing 8, humanhuman

TSL 5

Gene TRIM8, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-202ENST00000462202 GAGE2DQ9UEU5 116 aa13.59□□□□□ -0.23
TRIM8-202ENST00000462202 HNRNPA3P51991 378 aaKnown RBP13.58□□□□□ -0.24
TRIM8-202ENST00000462202 C9orf116Q5BN46 136 aaPredicted RBP13.58□□□□□ -0.24
TRIM8-202ENST00000462202 A0A096LNJ9 63 aa13.57□□□□□ -0.24
TRIM8-202ENST00000462202 TRBV30A0A0K0K1B3 111 aa13.57□□□□□ -0.24
TRIM8-202ENST00000462202 A0A1W2PNN7 141 aa13.57□□□□□ -0.24
TRIM8-202ENST00000462202 Q8IZM0 81 aa13.57□□□□□ -0.24
TRIM8-202ENST00000462202 Q6ZRP5 223 aa13.56□□□□□ -0.24
TRIM8-202ENST00000462202 ATP5LO75964 103 aa13.54□□□□□ -0.24
TRIM8-202ENST00000462202 SPINK8P0C7L1 97 aa13.54□□□□□ -0.24
TRIM8-202ENST00000462202 TLX1NBP0CAT3 122 aa13.54□□□□□ -0.24
TRIM8-202ENST00000462202 SMIM1B2RUZ4 78 aa13.53□□□□□ -0.24
TRIM8-202ENST00000462202 PRR3P79522 188 aaKnown RBP13.53□□□□□ -0.24
TRIM8-202ENST00000462202 BAGE3Q86Y29 109 aa13.53□□□□□ -0.24
TRIM8-202ENST00000462202 NDUFC2-KCTD14E9PQ53 114 aa13.52□□□□□ -0.25
TRIM8-202ENST00000462202 H3BRM9 83 aa13.52□□□□□ -0.25
TRIM8-202ENST00000462202 TRGC2P03986 189 aa13.52□□□□□ -0.25
TRIM8-202ENST00000462202 PDZD11Q5EBL8 140 aa13.52□□□□□ -0.25
TRIM8-202ENST00000462202 FAM19A5Q7Z5A7 132 aaPredicted RBP13.52□□□□□ -0.25
TRIM8-202ENST00000462202 COX7B2Q8TF08 81 aa13.52□□□□□ -0.25
TRIM8-202ENST00000462202 CHCHD1Q96BP2 118 aaKnown RBP13.52□□□□□ -0.25
TRIM8-202ENST00000462202 IGLV5-45A0A087WSX0 123 aa13.51□□□□□ -0.25
TRIM8-202ENST00000462202 FAM168BA1KXE4 195 aa13.51□□□□□ -0.25
TRIM8-202ENST00000462202 KRTAP29-1A8MX34 341 aaPredicted RBP13.51□□□□□ -0.25
TRIM8-202ENST00000462202 F8VRH5 84 aa13.5□□□□□ -0.25
TRIM8-202ENST00000462202 PHF5AQ7RTV0 110 aaKnown RBP13.5□□□□□ -0.25
TRIM8-202ENST00000462202 IGLC3P0DOY3 106 aa13.49□□□□□ -0.25
TRIM8-202ENST00000462202 CXCL5P42830 114 aa13.49□□□□□ -0.25
TRIM8-202ENST00000462202 HSBP1O75506 76 aa13.48□□□□□ -0.25
TRIM8-202ENST00000462202 OXTP01178 125 aa13.47□□□□□ -0.25
TRIM8-202ENST00000462202 CHTOPQ9Y3Y2 248 aaKnown RBP13.45□□□□□ -0.26
TRIM8-202ENST00000462202 ZNF22P17026 224 aaPredicted RBP13.44□□□□□ -0.26
TRIM8-202ENST00000462202 TMEM170BQ5T4T1 132 aa13.44□□□□□ -0.26
TRIM8-202ENST00000462202 FAM19A2Q8N3H0 131 aa13.44□□□□□ -0.26
TRIM8-202ENST00000462202 IFI27L1Q96BM0 104 aa13.44□□□□□ -0.26
TRIM8-202ENST00000462202 XAGE1AQ9HD64 81 aa13.44□□□□□ -0.26
TRIM8-202ENST00000462202 PKHD1L1Q86WI1 4243 aa13.43□□□□□ -0.26
TRIM8-202ENST00000462202 C11orf86A6NJI1 115 aa13.43□□□□□ -0.26
TRIM8-202ENST00000462202 M0QXV9 152 aa13.43□□□□□ -0.26
TRIM8-202ENST00000462202 C9orf129Q5T035 196 aaKnown RBP13.43□□□□□ -0.26
TRIM8-202ENST00000462202 HERC1Q15751 4861 aa13.43□□□□□ -0.26
TRIM8-202ENST00000462202 COLCA2A8K830 154 aa13.42□□□□□ -0.26
TRIM8-202ENST00000462202 PSORS1C2Q9UIG4 136 aa13.42□□□□□ -0.26
TRIM8-202ENST00000462202 UBE2BP63146 152 aa13.41□□□□□ -0.26
TRIM8-202ENST00000462202 LRP1Q07954 4544 aaKnown RBP13.4□□□□□ -0.26
TRIM8-202ENST00000462202 H0Y8G0 127 aa13.4□□□□□ -0.26
TRIM8-202ENST00000462202 SCO1O75880 301 aa13.4□□□□□ -0.26
TRIM8-202ENST00000462202 SERF1AO75920 110 aa13.4□□□□□ -0.26
TRIM8-202ENST00000462202 C1orf137Q5JT78 98 aa13.4□□□□□ -0.26
TRIM8-202ENST00000462202 TRAV12-1A0A0B4J245 112 aa13.37□□□□□ -0.27
TRIM8-202ENST00000462202 IGLV5-39A0A0G2JS06 123 aa13.37□□□□□ -0.27
TRIM8-202ENST00000462202 KRTAP7-1Q8IUC3 87 aa13.37□□□□□ -0.27
TRIM8-202ENST00000462202 SERTAD4-AS1Q5TG53 156 aa13.36□□□□□ -0.27
TRIM8-202ENST00000462202 SPINK6Q6UWN8 80 aa13.36□□□□□ -0.27
TRIM8-202ENST00000462202 FAT3Q8TDW7 4589 aa13.36□□□□□ -0.27
TRIM8-202ENST00000462202 LEPROTL1O95214 131 aa13.35□□□□□ -0.27
TRIM8-202ENST00000462202 PFN2P35080 140 aa13.35□□□□□ -0.27
TRIM8-202ENST00000462202 FABP4P15090 132 aa13.33□□□□□ -0.28
TRIM8-202ENST00000462202 LINC00310P59036 64 aa13.33□□□□□ -0.28
TRIM8-202ENST00000462202 KRTAP11-1Q8IUC1 163 aa13.33□□□□□ -0.28
TRIM8-202ENST00000462202 ZNF625Q96I27 306 aaPredicted RBP13.33□□□□□ -0.28
TRIM8-202ENST00000462202 REG3GQ6UW15 175 aa13.32□□□□□ -0.28
TRIM8-202ENST00000462202 C22orf24Q9Y442 160 aa13.32□□□□□ -0.28
TRIM8-202ENST00000462202 LBHQ53QV2 105 aaPredicted RBP13.31□□□□□ -0.28
TRIM8-202ENST00000462202 HSPB8Q9UJY1 196 aa13.31□□□□□ -0.28
TRIM8-202ENST00000462202 NUPR1O60356 82 aa13.3□□□□□ -0.28
TRIM8-202ENST00000462202 SRSF9Q13242 221 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRIM8-202ENST00000462202 TMEM223A0PJW6 202 aa13.29□□□□□ -0.28
TRIM8-202ENST00000462202 ERG28Q9UKR5 140 aa13.29□□□□□ -0.28
TRIM8-202ENST00000462202 IGLV7-43P04211 117 aa13.28□□□□□ -0.28
TRIM8-202ENST00000462202 ODF1Q14990 250 aa13.27□□□□□ -0.29
TRIM8-202ENST00000462202 SFTA2Q6UW10 78 aa13.27□□□□□ -0.29
TRIM8-202ENST00000462202 MRPL55Q7Z7F7 128 aaKnown RBP13.27□□□□□ -0.29
TRIM8-202ENST00000462202 NKAPP1Q8N9T2 125 aa13.26□□□□□ -0.29
TRIM8-202ENST00000462202 GAGE10A6NGK3 116 aa13.25□□□□□ -0.29
TRIM8-202ENST00000462202 MT1HL1P0DM35 61 aa13.24□□□□□ -0.29
TRIM8-202ENST00000462202 TP73-AS1Q9UF72 201 aa13.24□□□□□ -0.29
TRIM8-202ENST00000462202 A0A0U1RRA0 63 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 HIST1H2BKO60814 126 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 HIST1H2BJP06899 126 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 HIST1H2BOP23527 126 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 HIST1H2BBP33778 126 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 LINC00158P58513 81 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 HIST1H2BDP58876 126 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 HIST1H2BCP62807 126 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 COX17Q14061 63 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 HIST2H2BEQ16778 126 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.23□□□□□ -0.29
TRIM8-202ENST00000462202 HIST1H2BHQ93079 126 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 DIRC1Q969H9 104 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 LINC01600Q96MT4 127 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 HIST1H2BNQ99877 126 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 HIST1H2BMQ99879 126 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 PMCHL2Q9BQD1 86 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 SND1-IT1Q9HBX3 110 aa13.23□□□□□ -0.29
TRIM8-202ENST00000462202 RPL37AP8A6NKH3 93 aa13.22□□□□□ -0.29
TRIM8-202ENST00000462202 PLNP26678 52 aa13.22□□□□□ -0.29
TRIM8-202ENST00000462202 MAP1LC3CQ9BXW4 147 aa13.22□□□□□ -0.29
TRIM8-202ENST00000462202 PLA2G2DQ9UNK4 145 aa13.22□□□□□ -0.29
TRIM8-202ENST00000462202 LINC00167Q96N53 147 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms