RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 SMIM27A0A1W2PRY6 76 aa6.29□□□□□ -1.4
CBX3-205ENST00000462165 PRSS2P07478 247 aa6.29□□□□□ -1.4
CBX3-205ENST00000462165 CKS1BP61024 79 aa6.29□□□□□ -1.4
CBX3-205ENST00000462165 Q6ZN92 141 aa6.29□□□□□ -1.4
CBX3-205ENST00000462165 TCTE3Q8IZS6 198 aa6.29□□□□□ -1.4
CBX3-205ENST00000462165 LINC00304Q8N9R0 145 aa6.29□□□□□ -1.4
CBX3-205ENST00000462165 TMEM141Q96I45 108 aa6.29□□□□□ -1.4
CBX3-205ENST00000462165 EIF5A2Q9GZV4 153 aaKnown RBP6.29□□□□□ -1.4
CBX3-205ENST00000462165 ANAPC11Q9NYG5 84 aa6.29□□□□□ -1.4
CBX3-205ENST00000462165 IGLV7-46A0A075B6I9 117 aa6.28□□□□□ -1.4
CBX3-205ENST00000462165 SRP19P09132 144 aaKnown RBP6.28□□□□□ -1.4
CBX3-205ENST00000462165 CTAG1AP78358 180 aa6.28□□□□□ -1.4
CBX3-205ENST00000462165 ALKAL2Q6UX46 152 aa6.28□□□□□ -1.4
CBX3-205ENST00000462165 TEX43Q6ZNM6 134 aa6.28□□□□□ -1.4
CBX3-205ENST00000462165 LINC00173Q6ZV60 143 aa6.28□□□□□ -1.4
CBX3-205ENST00000462165 Q8IZM0 81 aa6.28□□□□□ -1.4
CBX3-205ENST00000462165 TOMM7Q9P0U1 55 aa6.28□□□□□ -1.4
CBX3-205ENST00000462165 F8W036 122 aa6.27□□□□□ -1.41
CBX3-205ENST00000462165 PPBPP02775 128 aa6.27□□□□□ -1.41
CBX3-205ENST00000462165 RAB5AP20339 215 aa6.27□□□□□ -1.41
CBX3-205ENST00000462165 RPL23P62829 140 aaKnown RBP6.27□□□□□ -1.41
CBX3-205ENST00000462165 FAM229BQ4G0N7 80 aa6.27□□□□□ -1.41
CBX3-205ENST00000462165 C6orf226Q5I0X4 101 aa6.27□□□□□ -1.41
CBX3-205ENST00000462165 KRTAP13-1Q8IUC0 172 aa6.27□□□□□ -1.41
CBX3-205ENST00000462165 LINC00167Q96N53 147 aa6.27□□□□□ -1.41
CBX3-205ENST00000462165 C2orf88Q9BSF0 95 aa6.27□□□□□ -1.41
CBX3-205ENST00000462165 AMELXQ99217 191 aa6.26□□□□□ -1.41
CBX3-205ENST00000462165 ALKBH7Q9BT30 221 aaPredicted RBP6.26□□□□□ -1.41
CBX3-205ENST00000462165 KRTAP4-11Q9BYQ6 195 aa6.26□□□□□ -1.41
CBX3-205ENST00000462165 RPL37AP8A6NKH3 93 aa6.25□□□□□ -1.41
CBX3-205ENST00000462165 F8VRH5 84 aa6.25□□□□□ -1.41
CBX3-205ENST00000462165 S100A8P05109 93 aa6.25□□□□□ -1.41
CBX3-205ENST00000462165 ZC2HC1BQ5TFG8 222 aa6.25□□□□□ -1.41
CBX3-205ENST00000462165 FAM19A3Q7Z5A8 133 aa6.25□□□□□ -1.41
CBX3-205ENST00000462165 FSIP2Q5CZC0 6907 aa6.24□□□□□ -1.41
CBX3-205ENST00000462165 A0A1B0GXF2 115 aa6.24□□□□□ -1.41
CBX3-205ENST00000462165 PRSS47A8MTI9 375 aa6.24□□□□□ -1.41
CBX3-205ENST00000462165 H3BS24 57 aa6.24□□□□□ -1.41
CBX3-205ENST00000462165 ADIRFQ15847 76 aa6.24□□□□□ -1.41
CBX3-205ENST00000462165 MRPL54Q6P161 138 aaKnown RBP6.24□□□□□ -1.41
CBX3-205ENST00000462165 C2orf66Q6UXQ4 117 aa6.24□□□□□ -1.41
CBX3-205ENST00000462165 ORMDL3Q8N138 153 aa6.24□□□□□ -1.41
CBX3-205ENST00000462165 IGKV2D-26A0A0A0MRZ7 120 aa6.23□□□□□ -1.41
CBX3-205ENST00000462165 NPSP0C0P6 89 aa6.23□□□□□ -1.41
CBX3-205ENST00000462165 UBE2AP49459 152 aa6.23□□□□□ -1.41
CBX3-205ENST00000462165 TMEM136Q6ZRR5 245 aa6.23□□□□□ -1.41
CBX3-205ENST00000462165 PRELID3AQ96N28 172 aa6.23□□□□□ -1.41
CBX3-205ENST00000462165 VCX2Q9H322 139 aa6.23□□□□□ -1.41
CBX3-205ENST00000462165 PPDPFQ9H3Y8 114 aa6.23□□□□□ -1.41
CBX3-205ENST00000462165 IGLV5-37A0A075B6J1 123 aa6.22□□□□□ -1.41
CBX3-205ENST00000462165 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
CBX3-205ENST00000462165 CXCL5P42830 114 aa6.22□□□□□ -1.41
CBX3-205ENST00000462165 NAT8Q9UHE5 227 aa6.22□□□□□ -1.41
CBX3-205ENST00000462165 CYSLTR1Q9Y271 337 aa6.22□□□□□ -1.41
CBX3-205ENST00000462165 GAGE10A6NGK3 116 aa6.21□□□□□ -1.42
CBX3-205ENST00000462165 HERVK_113P63121 156 aa6.21□□□□□ -1.42
CBX3-205ENST00000462165 SEC11AP67812 179 aa6.21□□□□□ -1.42
CBX3-205ENST00000462165 PNRC1Q12796 327 aaPredicted RBP6.21□□□□□ -1.42
CBX3-205ENST00000462165 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.42
CBX3-205ENST00000462165 CDKN2A-AS1Q9UH64 79 aa6.21□□□□□ -1.42
CBX3-205ENST00000462165 LOC389332A0A1B0GUA5 103 aa6.2□□□□□ -1.42
CBX3-205ENST00000462165 IGIPA6NJ69 53 aa6.2□□□□□ -1.42
CBX3-205ENST00000462165 LINC01547P58512 204 aaPredicted RBP6.2□□□□□ -1.42
CBX3-205ENST00000462165 MAP1LC3AQ9H492 121 aa6.2□□□□□ -1.42
CBX3-205ENST00000462165 LAMTOR2Q9Y2Q5 125 aa6.2□□□□□ -1.42
CBX3-205ENST00000462165 ORMDL2Q53FV1 153 aa6.19□□□□□ -1.42
CBX3-205ENST00000462165 ATP5L2Q7Z4Y8 100 aa6.19□□□□□ -1.42
CBX3-205ENST00000462165 Q8N8P6 123 aa6.19□□□□□ -1.42
CBX3-205ENST00000462165 NKAPP1Q8N9T2 125 aa6.19□□□□□ -1.42
CBX3-205ENST00000462165 ASB16-AS1Q495Z4 193 aa6.18□□□□□ -1.42
CBX3-205ENST00000462165 FP248Q71RG6 208 aaPredicted RBP6.18□□□□□ -1.42
CBX3-205ENST00000462165 GEMIN7Q9H840 131 aaKnown RBP6.18□□□□□ -1.42
CBX3-205ENST00000462165 IGKV2-28A0A075B6P5 120 aa6.17□□□□□ -1.42
CBX3-205ENST00000462165 SMIM1B2RUZ4 78 aa6.17□□□□□ -1.42
CBX3-205ENST00000462165 C9JQL5 133 aa6.17□□□□□ -1.42
CBX3-205ENST00000462165 K7EMI3 77 aa6.17□□□□□ -1.42
CBX3-205ENST00000462165 IGKV2D-28P01615 120 aa6.17□□□□□ -1.42
CBX3-205ENST00000462165 PRLHP81277 87 aa6.17□□□□□ -1.42
CBX3-205ENST00000462165 PAPPA-AS1Q5QFB9 102 aa6.17□□□□□ -1.42
CBX3-205ENST00000462165 SPAG11AQ6PDA7 123 aa6.17□□□□□ -1.42
CBX3-205ENST00000462165 C3orf22Q8N5N4 141 aa6.17□□□□□ -1.42
CBX3-205ENST00000462165 PDZD11Q5EBL8 140 aa6.16□□□□□ -1.42
CBX3-205ENST00000462165 FAM19A1Q7Z5A9 133 aa6.16□□□□□ -1.42
CBX3-205ENST00000462165 LINC00337Q8N6G1 96 aa6.16□□□□□ -1.42
CBX3-205ENST00000462165 COX7B2Q8TF08 81 aa6.16□□□□□ -1.42
CBX3-205ENST00000462165 PLEKHB2Q96CS7 222 aa6.16□□□□□ -1.42
CBX3-205ENST00000462165 SCO1O75880 301 aa6.15□□□□□ -1.42
CBX3-205ENST00000462165 RAB5BP61020 215 aa6.15□□□□□ -1.42
CBX3-205ENST00000462165 KRTAP13-3Q3SY46 172 aa6.15□□□□□ -1.42
CBX3-205ENST00000462165 TIMM17AQ99595 171 aa6.15□□□□□ -1.42
CBX3-205ENST00000462165 KRTAP4-1Q9BYQ7 146 aa6.15□□□□□ -1.42
CBX3-205ENST00000462165 TMEM126AQ9H061 195 aa6.15□□□□□ -1.42
CBX3-205ENST00000462165 SRSF3P84103 164 aaKnown RBP6.14□□□□□ -1.43
CBX3-205ENST00000462165 KRTAP19-4Q3LI73 84 aa6.14□□□□□ -1.43
CBX3-205ENST00000462165 IGLV5-45A0A087WSX0 123 aa6.13□□□□□ -1.43
CBX3-205ENST00000462165 TMEM238C9JI98 176 aa6.13□□□□□ -1.43
CBX3-205ENST00000462165 G0S2P27469 103 aa6.13□□□□□ -1.43
CBX3-205ENST00000462165 PEA15Q15121 130 aa6.13□□□□□ -1.43
CBX3-205ENST00000462165 AKAP14Q86UN6 197 aa6.13□□□□□ -1.43
CBX3-205ENST00000462165 CBLN2Q8IUK8 224 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms