RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 LINC00614P0C842 121 aa11.46□□□□□ -0.57
COL9A2-205ENST00000461118 Q8IZM0 81 aa11.46□□□□□ -0.57
COL9A2-205ENST00000461118 CST9LQ9H4G1 147 aa11.46□□□□□ -0.57
COL9A2-205ENST00000461118 TINCRA0A1B0GVN0 87 aa11.45□□□□□ -0.58
COL9A2-205ENST00000461118 C9orf116Q5BN46 136 aaPredicted RBP11.45□□□□□ -0.58
COL9A2-205ENST00000461118 C2orf82Q6UX34 121 aa11.45□□□□□ -0.58
COL9A2-205ENST00000461118 Q6ZRP5 223 aa11.45□□□□□ -0.58
COL9A2-205ENST00000461118 A0A096LNJ9 63 aa11.44□□□□□ -0.58
COL9A2-205ENST00000461118 PRSS2P07478 247 aa11.44□□□□□ -0.58
COL9A2-205ENST00000461118 PRR3P79522 188 aaKnown RBP11.44□□□□□ -0.58
COL9A2-205ENST00000461118 PMVKQ15126 192 aa11.44□□□□□ -0.58
COL9A2-205ENST00000461118 IGLV5-45A0A087WSX0 123 aa11.43□□□□□ -0.58
COL9A2-205ENST00000461118 C6orf226Q5I0X4 101 aa11.43□□□□□ -0.58
COL9A2-205ENST00000461118 PACRGQ96M98 296 aaPredicted RBP11.43□□□□□ -0.58
COL9A2-205ENST00000461118 RAB5BP61020 215 aa11.42□□□□□ -0.58
COL9A2-205ENST00000461118 TOMM7Q9P0U1 55 aa11.42□□□□□ -0.58
COL9A2-205ENST00000461118 NDUFC2-KCTD14E9PQ53 114 aa11.41□□□□□ -0.58
COL9A2-205ENST00000461118 CKS1BP61024 79 aa11.41□□□□□ -0.58
COL9A2-205ENST00000461118 LINC00469Q8N7U9 141 aa11.41□□□□□ -0.58
COL9A2-205ENST00000461118 SMIM1B2RUZ4 78 aa11.4□□□□□ -0.58
COL9A2-205ENST00000461118 HBDP02042 147 aa11.4□□□□□ -0.58
COL9A2-205ENST00000461118 PDZD11Q5EBL8 140 aa11.4□□□□□ -0.58
COL9A2-205ENST00000461118 ODF1Q14990 250 aa11.38□□□□□ -0.59
COL9A2-205ENST00000461118 GAGE2EQ4V326 116 aa11.38□□□□□ -0.59
COL9A2-205ENST00000461118 CBLN2Q8IUK8 224 aa11.38□□□□□ -0.59
COL9A2-205ENST00000461118 SLC7A5P1Q8MH63 180 aa11.38□□□□□ -0.59
COL9A2-205ENST00000461118 GAGE2DQ9UEU5 116 aa11.38□□□□□ -0.59
COL9A2-205ENST00000461118 F8VRH5 84 aa11.37□□□□□ -0.59
COL9A2-205ENST00000461118 CXCL5P42830 114 aa11.37□□□□□ -0.59
COL9A2-205ENST00000461118 FAM168BA1KXE4 195 aa11.36□□□□□ -0.59
COL9A2-205ENST00000461118 PMCHL1Q16048 86 aa11.36□□□□□ -0.59
COL9A2-205ENST00000461118 PHF5AQ7RTV0 110 aaKnown RBP11.36□□□□□ -0.59
COL9A2-205ENST00000461118 ATP5LO75964 103 aa11.35□□□□□ -0.59
COL9A2-205ENST00000461118 IGLC3P0DOY3 106 aa11.35□□□□□ -0.59
COL9A2-205ENST00000461118 SRSF9Q13242 221 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL9A2-205ENST00000461118 COX7B2Q8TF08 81 aa11.35□□□□□ -0.59
COL9A2-205ENST00000461118 CHCHD1Q96BP2 118 aaKnown RBP11.35□□□□□ -0.59
COL9A2-205ENST00000461118 H3BRM9 83 aa11.34□□□□□ -0.59
COL9A2-205ENST00000461118 C9orf129Q5T035 196 aaKnown RBP11.34□□□□□ -0.59
COL9A2-205ENST00000461118 SPINK6Q6UWN8 80 aa11.34□□□□□ -0.59
COL9A2-205ENST00000461118 KRTAP7-1Q8IUC3 87 aa11.34□□□□□ -0.59
COL9A2-205ENST00000461118 SPINK8P0C7L1 97 aa11.33□□□□□ -0.6
COL9A2-205ENST00000461118 NDUFA6P56556 154 aa11.33□□□□□ -0.6
COL9A2-205ENST00000461118 LINC01600Q96MT4 127 aa11.33□□□□□ -0.6
COL9A2-205ENST00000461118 PSORS1C2Q9UIG4 136 aa11.33□□□□□ -0.6
COL9A2-205ENST00000461118 FAM19A5Q7Z5A7 132 aaPredicted RBP11.32□□□□□ -0.6
COL9A2-205ENST00000461118 IGLV5-39A0A0G2JS06 123 aa11.3□□□□□ -0.6
COL9A2-205ENST00000461118 ZNF22P17026 224 aaPredicted RBP11.3□□□□□ -0.6
COL9A2-205ENST00000461118 BAGE3Q86Y29 109 aa11.3□□□□□ -0.6
COL9A2-205ENST00000461118 TRGC2P03986 189 aa11.29□□□□□ -0.6
COL9A2-205ENST00000461118 M0QXV9 152 aa11.28□□□□□ -0.6
COL9A2-205ENST00000461118 KRTAP11-1Q8IUC1 163 aa11.28□□□□□ -0.6
COL9A2-205ENST00000461118 C1orf137Q5JT78 98 aa11.27□□□□□ -0.61
COL9A2-205ENST00000461118 XAGE1AQ9HD64 81 aa11.27□□□□□ -0.61
COL9A2-205ENST00000461118 TRAV12-1A0A0B4J245 112 aa11.26□□□□□ -0.61
COL9A2-205ENST00000461118 C11orf86A6NJI1 115 aa11.26□□□□□ -0.61
COL9A2-205ENST00000461118 KRTAP10-8P60410 259 aa11.26□□□□□ -0.61
COL9A2-205ENST00000461118 IFI27L1Q96BM0 104 aa11.26□□□□□ -0.61
COL9A2-205ENST00000461118 COLCA2A8K830 154 aa11.25□□□□□ -0.61
COL9A2-205ENST00000461118 REG3GQ6UW15 175 aa11.25□□□□□ -0.61
COL9A2-205ENST00000461118 CHTOPQ9Y3Y2 248 aaKnown RBP11.25□□□□□ -0.61
COL9A2-205ENST00000461118 HSBP1O75506 76 aa11.24□□□□□ -0.61
COL9A2-205ENST00000461118 IGLV7-43P04211 117 aa11.23□□□□□ -0.61
COL9A2-205ENST00000461118 TMEM170BQ5T4T1 132 aa11.23□□□□□ -0.61
COL9A2-205ENST00000461118 C22orf24Q9Y442 160 aa11.23□□□□□ -0.61
COL9A2-205ENST00000461118 UBE2BP63146 152 aa11.22□□□□□ -0.61
COL9A2-205ENST00000461118 FAM19A2Q8N3H0 131 aa11.22□□□□□ -0.61
COL9A2-205ENST00000461118 TP73-AS1Q9UF72 201 aa11.22□□□□□ -0.61
COL9A2-205ENST00000461118 LINC00310P59036 64 aa11.21□□□□□ -0.61
COL9A2-205ENST00000461118 LBHQ53QV2 105 aaPredicted RBP11.21□□□□□ -0.61
COL9A2-205ENST00000461118 LPAP08519 4548 aa11.21□□□□□ -0.62
COL9A2-205ENST00000461118 SFTA2Q6UW10 78 aa11.2□□□□□ -0.62
COL9A2-205ENST00000461118 SERF1AO75920 110 aa11.19□□□□□ -0.62
COL9A2-205ENST00000461118 TMEM223A0PJW6 202 aa11.18□□□□□ -0.62
COL9A2-205ENST00000461118 COX17Q14061 63 aa11.18□□□□□ -0.62
COL9A2-205ENST00000461118 LEPROTL1O95214 131 aa11.17□□□□□ -0.62
COL9A2-205ENST00000461118 MRPL55Q7Z7F7 128 aaKnown RBP11.17□□□□□ -0.62
COL9A2-205ENST00000461118 DIRC1Q969H9 104 aa11.17□□□□□ -0.62
COL9A2-205ENST00000461118 ERG28Q9UKR5 140 aa11.17□□□□□ -0.62
COL9A2-205ENST00000461118 IGLV5-37A0A075B6J1 123 aa11.16□□□□□ -0.62
COL9A2-205ENST00000461118 PFN2P35080 140 aa11.16□□□□□ -0.62
COL9A2-205ENST00000461118 ZNF625Q96I27 306 aaPredicted RBP11.16□□□□□ -0.62
COL9A2-205ENST00000461118 NUPR1O60356 82 aa11.15□□□□□ -0.62
COL9A2-205ENST00000461118 H0Y9J4 135 aa11.14□□□□□ -0.63
COL9A2-205ENST00000461118 LINC00167Q96N53 147 aa11.13□□□□□ -0.63
COL9A2-205ENST00000461118 SND1-IT1Q9HBX3 110 aa11.12□□□□□ -0.63
COL9A2-205ENST00000461118 HSPB8Q9UJY1 196 aa11.12□□□□□ -0.63
COL9A2-205ENST00000461118 SCO1O75880 301 aa11.11□□□□□ -0.63
COL9A2-205ENST00000461118 ZNF861PO60384 105 aa11.1□□□□□ -0.63
COL9A2-205ENST00000461118 NKAPP1Q8N9T2 125 aa11.1□□□□□ -0.63
COL9A2-205ENST00000461118 H0Y8G0 127 aa11.09□□□□□ -0.63
COL9A2-205ENST00000461118 FABP4P15090 132 aa11.09□□□□□ -0.63
COL9A2-205ENST00000461118 RPL37AP8A6NKH3 93 aa11.08□□□□□ -0.64
COL9A2-205ENST00000461118 VPREB1P12018 145 aa11.08□□□□□ -0.64
COL9A2-205ENST00000461118 PLNP26678 52 aa11.08□□□□□ -0.64
COL9A2-205ENST00000461118 GAGE10A6NGK3 116 aa11.07□□□□□ -0.64
COL9A2-205ENST00000461118 BCE1O60756 84 aa11.07□□□□□ -0.64
COL9A2-205ENST00000461118 HIST1H2BKO60814 126 aa11.07□□□□□ -0.64
COL9A2-205ENST00000461118 HIST1H2BJP06899 126 aa11.07□□□□□ -0.64
COL9A2-205ENST00000461118 HIST1H2BOP23527 126 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms