RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 MT-ND4LP03901 98 aa2.67□□□□□ -1.98
CNN3-204ENST00000461018 CKS2P33552 79 aa2.67□□□□□ -1.98
CNN3-204ENST00000461018 DSCR10P59022 87 aa2.67□□□□□ -1.98
CNN3-204ENST00000461018 MRPS36P82909 103 aaKnown RBP2.67□□□□□ -1.98
CNN3-204ENST00000461018 MRPL51Q4U2R6 128 aaKnown RBP2.67□□□□□ -1.98
CNN3-204ENST00000461018 ORMDL3Q8N138 153 aa2.67□□□□□ -1.98
CNN3-204ENST00000461018 IMMP2LQ96T52 175 aa2.67□□□□□ -1.98
CNN3-204ENST00000461018 SMIM2Q9BVW6 85 aa2.67□□□□□ -1.98
CNN3-204ENST00000461018 RPS10P5Q9NQ39 176 aa2.67□□□□□ -1.98
CNN3-204ENST00000461018 SPANXA1Q9NS26 97 aa2.67□□□□□ -1.98
CNN3-204ENST00000461018 UBE2D4Q9Y2X8 147 aa2.67□□□□□ -1.98
CNN3-204ENST00000461018 MACF1Q9UPN3 7388 aaKnown RBP2.66□□□□□ -1.98
CNN3-204ENST00000461018 IGLV7-46A0A075B6I9 117 aa2.66□□□□□ -1.98
CNN3-204ENST00000461018 TRAV9-1A0A075B6T8 112 aa2.66□□□□□ -1.98
CNN3-204ENST00000461018 APOMO95445 188 aa2.66□□□□□ -1.98
CNN3-204ENST00000461018 G0S2P27469 103 aa2.66□□□□□ -1.98
CNN3-204ENST00000461018 XCL1P47992 114 aa2.66□□□□□ -1.98
CNN3-204ENST00000461018 CAMPP49913 170 aa2.66□□□□□ -1.98
CNN3-204ENST00000461018 CLLU1Q5K131 121 aa2.66□□□□□ -1.98
CNN3-204ENST00000461018 UQCC3Q6UW78 93 aa2.66□□□□□ -1.98
CNN3-204ENST00000461018 OR10D4PQ8NGN7 298 aa2.66□□□□□ -1.98
CNN3-204ENST00000461018 C7orf33Q8WU49 177 aa2.66□□□□□ -1.98
CNN3-204ENST00000461018 C2orf48Q96LS8 159 aa2.66□□□□□ -1.98
CNN3-204ENST00000461018 IGLV4-69A0A075B6H9 119 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 IGHV3OR16-9A0A0B4J2B5 98 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 IGKV3OR2-268A0A0C4DH90 116 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 LINC01549A6NIU2 74 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 D6R8Y8 96 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 SMKR1H3BMG3 65 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 NPYP01303 97 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 RAB5AP20339 215 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 SNRPEP62304 92 aaKnown RBP2.65□□□□□ -1.99
CNN3-204ENST00000461018 COX6A2Q02221 97 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 SYCNQ0VAF6 134 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 PRR4Q16378 134 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 HIGD2BQ4VC39 106 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 MRPL54Q6P161 138 aaKnown RBP2.65□□□□□ -1.99
CNN3-204ENST00000461018 TMEM136Q6ZRR5 245 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 LINC01561Q8N1V8 128 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 DPH3Q96FX2 82 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 CARD19Q96LW7 228 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 NEBP20929 6669 aa2.65□□□□□ -1.99
CNN3-204ENST00000461018 TRAV13-1A0A0B4J241 112 aa2.64□□□□□ -1.99
CNN3-204ENST00000461018 LOC107984640A0A0U1RRK4 108 aa2.64□□□□□ -1.99
CNN3-204ENST00000461018 TLX1NBP0CAT3 122 aa2.64□□□□□ -1.99
CNN3-204ENST00000461018 IFI27P40305 119 aaPredicted RBP2.64□□□□□ -1.99
CNN3-204ENST00000461018 GAGE2BQ13066 116 aa2.64□□□□□ -1.99
CNN3-204ENST00000461018 COX19Q49B96 90 aa2.64□□□□□ -1.99
CNN3-204ENST00000461018 GAGE2EQ4V326 116 aa2.64□□□□□ -1.99
CNN3-204ENST00000461018 GAGE2AQ6NT46 116 aa2.64□□□□□ -1.99
CNN3-204ENST00000461018 Q6ZUT4 128 aa2.64□□□□□ -1.99
CNN3-204ENST00000461018 Q8N8P6 123 aa2.64□□□□□ -1.99
CNN3-204ENST00000461018 FAM104AQ969W3 186 aa2.64□□□□□ -1.99
CNN3-204ENST00000461018 PRELID3AQ96N28 172 aa2.64□□□□□ -1.99
CNN3-204ENST00000461018 MAP1LC3AQ9H492 121 aa2.64□□□□□ -1.99
CNN3-204ENST00000461018 NXT2Q9NPJ8 142 aaKnown RBP2.64□□□□□ -1.99
CNN3-204ENST00000461018 MRPL35Q9NZE8 188 aaKnown RBP2.64□□□□□ -1.99
CNN3-204ENST00000461018 GAGE2DQ9UEU5 116 aa2.64□□□□□ -1.99
CNN3-204ENST00000461018 A0A087WZ39 114 aa2.63□□□□□ -1.99
CNN3-204ENST00000461018 A0A096LNI7 61 aa2.63□□□□□ -1.99
CNN3-204ENST00000461018 TGIF2-C20orf24A0A0A6YYL0 155 aa2.63□□□□□ -1.99
CNN3-204ENST00000461018 CHTF8P0CG12 524 aa2.63□□□□□ -1.99
CNN3-204ENST00000461018 RPL39P62891 51 aaKnown RBP2.63□□□□□ -1.99
CNN3-204ENST00000461018 SEC11AP67812 179 aa2.63□□□□□ -1.99
CNN3-204ENST00000461018 MAJINQ3KP22 176 aa2.63□□□□□ -1.99
CNN3-204ENST00000461018 ORMDL2Q53FV1 153 aa2.63□□□□□ -1.99
CNN3-204ENST00000461018 Q6ZN92 141 aa2.63□□□□□ -1.99
CNN3-204ENST00000461018 FAM19A3Q7Z5A8 133 aa2.63□□□□□ -1.99
CNN3-204ENST00000461018 TMEM141Q96I45 108 aa2.63□□□□□ -1.99
CNN3-204ENST00000461018 CAMK2N2Q96S95 79 aa2.63□□□□□ -1.99
CNN3-204ENST00000461018 C2orf88Q9BSF0 95 aa2.63□□□□□ -1.99
CNN3-204ENST00000461018 SEC11CQ9BY50 192 aa2.63□□□□□ -1.99
CNN3-204ENST00000461018 KRTAP4-1Q9BYQ7 146 aa2.63□□□□□ -1.99
CNN3-204ENST00000461018 CYSLTR1Q9Y271 337 aa2.63□□□□□ -1.99
CNN3-204ENST00000461018 IGLV4-3A0A075B6K6 122 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 IGKV2-24A0A0C4DH68 120 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 TRBV30A0A0K0K1B3 111 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 TMEM218A2RU14 115 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 IGIPA6NJ69 53 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 NDUFA1O15239 70 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 MT-ND6P03923 174 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 S100PP25815 95 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 UBE2D1P51668 147 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 PRR3P79522 188 aaKnown RBP2.62□□□□□ -1.99
CNN3-204ENST00000461018 SPAG11BQ08648 103 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 LINC00242Q5T6M2 205 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 SPINK6Q6UWN8 80 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 TEX43Q6ZNM6 134 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 Q6ZRP5 223 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 AMELXQ99217 191 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 TIMM17AQ99595 171 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 GNB1LQ9BYB4 327 aa2.62□□□□□ -1.99
CNN3-204ENST00000461018 LINC01546A6NGU7 62 aa2.61□□□□□ -1.99
CNN3-204ENST00000461018 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.61□□□□□ -1.99
CNN3-204ENST00000461018 SRSF9Q13242 221 aaKnown RBP eCLIP2.61□□□□□ -1.99
CNN3-204ENST00000461018 KIAA0087Q14695 138 aa2.61□□□□□ -1.99
CNN3-204ENST00000461018 RHEBQ15382 184 aa2.61□□□□□ -1.99
CNN3-204ENST00000461018 RNASE13Q5GAN3 156 aaKnown RBP2.61□□□□□ -1.99
CNN3-204ENST00000461018 C10orf91Q5T1B1 145 aa2.61□□□□□ -1.99
CNN3-204ENST00000461018 REG3GQ6UW15 175 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms