RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 NDUFA6P56556 154 aa4.66□□□□□ -1.66
RTN4-212ENST00000461004 SPAG11BQ08648 103 aa4.66□□□□□ -1.66
RTN4-212ENST00000461004 Q6ZRU5 148 aa4.66□□□□□ -1.66
RTN4-212ENST00000461004 ORAOV1Q8WV07 137 aa4.66□□□□□ -1.66
RTN4-212ENST00000461004 CHCHD1Q96BP2 118 aaKnown RBP4.66□□□□□ -1.66
RTN4-212ENST00000461004 CDKN2A-AS1Q9UH64 79 aa4.66□□□□□ -1.66
RTN4-212ENST00000461004 VPS13BQ7Z7G8 4022 aa4.66□□□□□ -1.66
RTN4-212ENST00000461004 PCLOQ9Y6V0 5065 aa4.65□□□□□ -1.66
RTN4-212ENST00000461004 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.65□□□□□ -1.67
RTN4-212ENST00000461004 HIST1H2BKO60814 126 aa4.65□□□□□ -1.67
RTN4-212ENST00000461004 HIST1H2BJP06899 126 aa4.65□□□□□ -1.67
RTN4-212ENST00000461004 HIST1H2BOP23527 126 aa4.65□□□□□ -1.67
RTN4-212ENST00000461004 HIST1H2BBP33778 126 aa4.65□□□□□ -1.67
RTN4-212ENST00000461004 HIST1H2BDP58876 126 aa4.65□□□□□ -1.67
RTN4-212ENST00000461004 HIST1H2BCP62807 126 aa4.65□□□□□ -1.67
RTN4-212ENST00000461004 SYCNQ0VAF6 134 aa4.65□□□□□ -1.67
RTN4-212ENST00000461004 KIAA0087Q14695 138 aa4.65□□□□□ -1.67
RTN4-212ENST00000461004 PMVKQ15126 192 aa4.65□□□□□ -1.67
RTN4-212ENST00000461004 HIST2H2BEQ16778 126 aa4.65□□□□□ -1.67
RTN4-212ENST00000461004 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.65□□□□□ -1.67
RTN4-212ENST00000461004 UNQ6190/PRO20217Q6UXQ8 127 aa4.65□□□□□ -1.67
RTN4-212ENST00000461004 SCXQ7RTU7 201 aa4.65□□□□□ -1.67
RTN4-212ENST00000461004 HIST1H2BHQ93079 126 aa4.65□□□□□ -1.67
RTN4-212ENST00000461004 HIST1H2BNQ99877 126 aa4.65□□□□□ -1.67
RTN4-212ENST00000461004 HIST1H2BMQ99879 126 aa4.65□□□□□ -1.67
RTN4-212ENST00000461004 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.64□□□□□ -1.67
RTN4-212ENST00000461004 TINCRA0A1B0GVN0 87 aa4.64□□□□□ -1.67
RTN4-212ENST00000461004 HSBP1O75506 76 aa4.64□□□□□ -1.67
RTN4-212ENST00000461004 APOMO95445 188 aa4.64□□□□□ -1.67
RTN4-212ENST00000461004 S100A1P23297 94 aa4.64□□□□□ -1.67
RTN4-212ENST00000461004 PAPPA-AS1Q5QFB9 102 aa4.64□□□□□ -1.67
RTN4-212ENST00000461004 C2orf82Q6UX34 121 aa4.64□□□□□ -1.67
RTN4-212ENST00000461004 CIRBP-AS1Q8TBR5 109 aa4.64□□□□□ -1.67
RTN4-212ENST00000461004 CARD19Q96LW7 228 aa4.64□□□□□ -1.67
RTN4-212ENST00000461004 CAMK2N2Q96S95 79 aa4.64□□□□□ -1.67
RTN4-212ENST00000461004 CHAC1Q9BUX1 264 aa4.64□□□□□ -1.67
RTN4-212ENST00000461004 GEMIN7Q9H840 131 aaKnown RBP4.64□□□□□ -1.67
RTN4-212ENST00000461004 IGLV5-45A0A087WSX0 123 aa4.63□□□□□ -1.67
RTN4-212ENST00000461004 A0A096LNI7 61 aa4.63□□□□□ -1.67
RTN4-212ENST00000461004 IGKV2-24A0A0C4DH68 120 aa4.63□□□□□ -1.67
RTN4-212ENST00000461004 LINC01549A6NIU2 74 aa4.63□□□□□ -1.67
RTN4-212ENST00000461004 C11orf86A6NJI1 115 aa4.63□□□□□ -1.67
RTN4-212ENST00000461004 ATP5LO75964 103 aa4.63□□□□□ -1.67
RTN4-212ENST00000461004 SPINK8P0C7L1 97 aa4.63□□□□□ -1.67
RTN4-212ENST00000461004 FABP4P15090 132 aa4.63□□□□□ -1.67
RTN4-212ENST00000461004 HERVK_113P63121 156 aa4.63□□□□□ -1.67
RTN4-212ENST00000461004 LINC00469Q8N7U9 141 aa4.63□□□□□ -1.67
RTN4-212ENST00000461004 OR10D4PQ8NGN7 298 aa4.63□□□□□ -1.67
RTN4-212ENST00000461004 IFI27L1Q96BM0 104 aa4.63□□□□□ -1.67
RTN4-212ENST00000461004 C2orf48Q96LS8 159 aa4.63□□□□□ -1.67
RTN4-212ENST00000461004 TOMM7Q9P0U1 55 aa4.63□□□□□ -1.67
RTN4-212ENST00000461004 C6orf48Q9UBA6 75 aa4.63□□□□□ -1.67
RTN4-212ENST00000461004 SMIM1B2RUZ4 78 aa4.62□□□□□ -1.67
RTN4-212ENST00000461004 H0Y8G0 127 aa4.62□□□□□ -1.67
RTN4-212ENST00000461004 IGLC3P0DOY3 106 aa4.62□□□□□ -1.67
RTN4-212ENST00000461004 ZNF22P17026 224 aaPredicted RBP4.62□□□□□ -1.67
RTN4-212ENST00000461004 C9orf116Q5BN46 136 aaPredicted RBP4.62□□□□□ -1.67
RTN4-212ENST00000461004 LINC01561Q8N1V8 128 aa4.62□□□□□ -1.67
RTN4-212ENST00000461004 MPLKIPQ8TAP9 179 aa4.62□□□□□ -1.67
RTN4-212ENST00000461004 MRPL35Q9NZE8 188 aaKnown RBP4.62□□□□□ -1.67
RTN4-212ENST00000461004 A0A087WYN8 130 aa4.61□□□□□ -1.67
RTN4-212ENST00000461004 IGLV5-39A0A0G2JS06 123 aa4.61□□□□□ -1.67
RTN4-212ENST00000461004 LEPROTL1O95214 131 aa4.61□□□□□ -1.67
RTN4-212ENST00000461004 SEC11AP67812 179 aa4.61□□□□□ -1.67
RTN4-212ENST00000461004 GAGE2BQ13066 116 aa4.61□□□□□ -1.67
RTN4-212ENST00000461004 CIRBPQ14011 172 aaKnown RBP4.61□□□□□ -1.67
RTN4-212ENST00000461004 MAJINQ3KP22 176 aa4.61□□□□□ -1.67
RTN4-212ENST00000461004 SPACA4Q8TDM5 124 aa4.61□□□□□ -1.67
RTN4-212ENST00000461004 DPH3Q96FX2 82 aa4.61□□□□□ -1.67
RTN4-212ENST00000461004 PACRGQ96M98 296 aaPredicted RBP4.61□□□□□ -1.67
RTN4-212ENST00000461004 PMCHL2Q9BQD1 86 aa4.61□□□□□ -1.67
RTN4-212ENST00000461004 CHTOPQ9Y3Y2 248 aaKnown RBP4.61□□□□□ -1.67
RTN4-212ENST00000461004 TRAV12-1A0A0B4J245 112 aa4.6□□□□□ -1.67
RTN4-212ENST00000461004 A0A1W2PNN7 141 aa4.6□□□□□ -1.67
RTN4-212ENST00000461004 NDUFA1O15239 70 aa4.6□□□□□ -1.67
RTN4-212ENST00000461004 C6orf226Q5I0X4 101 aa4.6□□□□□ -1.67
RTN4-212ENST00000461004 PKHD1L1Q86WI1 4243 aa4.6□□□□□ -1.67
RTN4-212ENST00000461004 LOC107984640A0A0U1RRK4 108 aa4.59□□□□□ -1.67
RTN4-212ENST00000461004 EPM2AB3EWF7 344 aa4.59□□□□□ -1.67
RTN4-212ENST00000461004 PRSS2P07478 247 aa4.59□□□□□ -1.67
RTN4-212ENST00000461004 RPL18AQ02543 176 aaKnown RBP4.59□□□□□ -1.67
RTN4-212ENST00000461004 TMEM170BQ5T4T1 132 aa4.59□□□□□ -1.67
RTN4-212ENST00000461004 Q5VSD8 79 aa4.59□□□□□ -1.67
RTN4-212ENST00000461004 Q6ZRP5 223 aa4.59□□□□□ -1.67
RTN4-212ENST00000461004 Q8IZM0 81 aa4.59□□□□□ -1.67
RTN4-212ENST00000461004 STPG4Q8N801 248 aa4.59□□□□□ -1.67
RTN4-212ENST00000461004 COX7B2Q8TF08 81 aa4.59□□□□□ -1.67
RTN4-212ENST00000461004 PLAC8Q9NZF1 115 aa4.59□□□□□ -1.67
RTN4-212ENST00000461004 FAM168BA1KXE4 195 aa4.58□□□□□ -1.68
RTN4-212ENST00000461004 F8VRH5 84 aa4.58□□□□□ -1.68
RTN4-212ENST00000461004 KRTAP10-4P60372 401 aaPredicted RBP4.58□□□□□ -1.68
RTN4-212ENST00000461004 CKS1BP61024 79 aa4.58□□□□□ -1.68
RTN4-212ENST00000461004 GAGE2EQ4V326 116 aa4.58□□□□□ -1.68
RTN4-212ENST00000461004 COA6Q5JTJ3 125 aaKnown RBP4.58□□□□□ -1.68
RTN4-212ENST00000461004 KRTAP7-1Q8IUC3 87 aa4.58□□□□□ -1.68
RTN4-212ENST00000461004 GAGE2DQ9UEU5 116 aa4.58□□□□□ -1.68
RTN4-212ENST00000461004 FLG2Q5D862 2391 aaPredicted RBP4.57□□□□□ -1.68
RTN4-212ENST00000461004 TRBV30A0A0K0K1B3 111 aa4.57□□□□□ -1.68
RTN4-212ENST00000461004 TMEM223A0PJW6 202 aa4.57□□□□□ -1.68
RTN4-212ENST00000461004 GAGE10A6NGK3 116 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms